Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 3.3e-50 201.4 104 100.0
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 9.9e-39 163.3 92 89.1
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.9e-38 161.8 87 96.6
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.9e-38 161.8 87 96.6
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 2.9e-38 161.8 89 93.3
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 6.4e-38 160.6 87 95.4
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 8.4e-38 160.2 87 93.1
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 8.4e-38 160.2 87 93.1
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 8.4e-38 160.2 87 93.1
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 8.4e-38 160.2 87 95.4
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 8.4e-38 160.2 87 94.3
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 1.1e-37 159.8 88 93.2
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 1.1e-37 159.8 87 93.1
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 1.1e-37 159.8 87 93.1
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.1e-37 159.8 87 95.4
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 1.1e-37 159.8 87 93.1
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 1.1e-37 159.8 87 93.1
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 1.4e-37 159.5 87 92.0
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 1.4e-37 159.5 87 93.1
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.4e-37 159.5 87 95.4
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 1.4e-37 159.5 87 93.1
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 1.4e-37 159.5 87 93.1
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 1.9e-37 159.1 87 93.1
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 2.4e-37 158.7 88 95.5
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 2.4e-37 158.7 87 93.1
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 2.4e-37 158.7 87 92.0
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 2.4e-37 158.7 87 93.1
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 3.2e-37 158.3 87 93.1
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 3.2e-37 158.3 87 89.7
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 4.2e-37 157.9 87 92.0
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 4.2e-37 157.9 87 95.4
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 4.2e-37 157.9 87 90.8
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 5.4e-37 157.5 87 92.0
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 5.4e-37 157.5 87 90.8
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 5.4e-37 157.5 87 93.1
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 5.4e-37 157.5 87 94.3
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 7.1e-37 157.1 86 94.2
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 9.3e-37 156.8 85 91.8
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 9.3e-37 156.8 87 92.0
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 9.3e-37 156.8 86 95.3
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 9.3e-37 156.8 87 92.0
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 9.3e-37 156.8 87 92.0
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 1.2e-36 156.4 87 89.7
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 1.2e-36 156.4 87 90.8
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.2e-36 156.4 87 94.3
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 1.2e-36 156.4 87 89.7
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 1.6e-36 156.0 90 88.9
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 2.1e-36 155.6 87 90.8
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 2.1e-36 155.6 87 92.0
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 2.1e-36 155.6 91 89.0
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 2.1e-36 155.6 89 89.9
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 2.1e-36 155.6 87 92.0
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 2.7e-36 155.2 87 87.4
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 2.7e-36 155.2 87 92.0
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 2.7e-36 155.2 87 90.8
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 2.7e-36 155.2 87 89.7
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 3.5e-36 154.8 87 89.7
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 3.5e-36 154.8 87 88.5
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 3.5e-36 154.8 87 89.7
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 4.6e-36 154.5 87 89.7
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 4.6e-36 154.5 87 87.4
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 4.6e-36 154.5 87 90.8
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 6.0e-36 154.1 87 89.7
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 6.0e-36 154.1 87 89.7
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 6.0e-36 154.1 87 89.7
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 6.0e-36 154.1 87 89.7
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 6.0e-36 154.1 87 89.7
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 6.0e-36 154.1 87 88.5
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 6.0e-36 154.1 87 90.8
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 6.0e-36 154.1 87 90.8
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 7.9e-36 153.7 87 89.7
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 7.9e-36 153.7 87 88.5
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 1.0e-35 153.3 87 88.5
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 1.0e-35 153.3 87 89.7
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 1.8e-35 152.5 87 86.2
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 2.3e-35 152.1 87 88.5
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 2.3e-35 152.1 87 86.2
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 2.3e-35 152.1 87 88.5
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 3.0e-35 151.8 87 87.4
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 3.0e-35 151.8 87 86.2
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 3.9e-35 151.4 87 88.5
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.5e-34 149.4 87 86.2
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 1.5e-34 149.4 100 81.0
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 1.5e-34 149.4 87 87.4
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 1.9e-34 149.1 87 86.2
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 1.9e-34 149.1 87 87.4
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 1.9e-34 149.1 87 87.4
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 2.5e-34 148.7 95 81.1
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 2.5e-34 148.7 87 87.4
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 2.5e-34 148.7 85 87.1
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 2.5e-34 148.7 86 88.4
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 3.3e-34 148.3 87 87.4
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 3.3e-34 148.3 87 87.4
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 3.3e-34 148.3 87 87.4
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 3.3e-34 148.3 85 87.1
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 4.3e-34 147.9 87 88.5
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 5.6e-34 147.5 87 87.4
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 1.3e-33 146.4 87 86.2
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 1.3e-33 146.4 87 86.2
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 2.1e-33 145.6 94 80.9
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 2.8e-33 145.2 86 86.0
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.8e-33 145.2 87 90.8
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 2.8e-33 145.2 87 81.6
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 1.4e-32 142.9 87 82.8
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 1.8e-32 142.5 87 86.2
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 2.4e-32 142.1 91 82.4
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.4e-32 142.1 87 88.5
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 5.3e-32 141.0 87 81.6
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 6.9e-32 140.6 87 82.8
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 3.8e-30 134.8 139 56.8
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 6.5e-30 134.0 87 78.2
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 2.5e-29 132.1 87 81.6
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 3.2e-29 131.7 100 70.0
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 5.5e-29 131.0 87 75.9
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 9.3e-29 130.2 83 81.9
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 7.9e-28 127.1 66 98.5
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 1.0e-27 126.7 87 70.1
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 1.8e-27 125.9 66 97.0
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 2.3e-27 125.6 66 95.5
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 3.9e-27 124.8 66 93.9
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 6.7e-27 124.0 65 96.9
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 1.1e-26 123.2 70 91.4
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 1.5e-26 122.9 87 67.8
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 1.9e-26 122.5 66 90.9
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 3.3e-26 121.7 69 89.9
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 3.3e-26 121.7 87 73.6
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 4.3e-26 121.3 66 93.9
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 4.3e-26 121.3 77 85.7
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 5.7e-26 120.9 65 93.8
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 5.7e-26 120.9 65 93.8
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 1.3e-25 119.8 70 87.1
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 1.6e-25 119.4 66 89.4
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 2.1e-25 119.0 66 92.4
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 3.7e-25 118.2 70 85.7
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 5.3e-24 114.4 67 88.1
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 6.9e-24 114.0 69 82.6
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 2.0e-23 112.5 64 89.1
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 3.4e-23 111.7 66 86.4
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 1.3e-22 109.8 61 90.2
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 1.0e-19 100.1 66 74.2
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 3.0e-19 98.6 66 72.7
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 5.1e-19 97.8 64 75.0
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 1.1e-18 96.7 67 71.6
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 1.5e-18 96.3 84 56.0
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 3.3e-18 95.1 74 66.2
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 9.7e-18 93.6 63 73.0
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 1.1e-16 90.1 65 69.2
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 5.3e-16 87.8 87 58.6
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 5.3e-16 87.8 62 75.8
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 1.3e-14 83.2 87 47.1
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 1.7e-14 82.8 51 86.3
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 1.4e-11 73.2 79 44.3
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 2.2e-06 55.8 90 34.4


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