Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_31053 Corchorus olitorius HOM05D005657 ORTHO05D007104 3.9e-30 134.0 63 100.0
Thecc.06G148800 Theobroma cacao HOM05D005657 ORTHO05D007104 4.3e-21 104.0 53 90.6
Duzib192G0691 Durio zibethinus HOM05D005657 ORTHO05D007104 1.3e-20 102.4 53 88.7
CiPaw.09G122400 Carya illinoinensis HOM05D005657 ORTHO05D007104 2.8e-20 101.3 53 83.0
Cfa000932 Carpinus fangiana HOM05D005657 ORTHO05D007104 6.3e-20 100.1 53 83.0
Haze_05617 Corylus avellana HOM05D005657 ORTHO05D007104 1.1e-19 99.4 53 83.0
Gohir.D05G150300 Gossypium hirsutum HOM05D005657 ORTHO05D007104 1.1e-19 99.4 53 83.0
Gorai.009G154400 Gossypium raimondii HOM05D005657 ORTHO05D007104 1.1e-19 99.4 53 83.0
THA.LOC104812673 Tarenaya hassleriana HOM05D005657 ORTHO05D007104 1.4e-19 99.0 53 81.1
Gohir.A05G147800 Gossypium hirsutum HOM05D005657 ORTHO05D007104 5.3e-19 97.1 53 83.0
TWI53G0207 Tripterygium wilfordii HOM05D005657 ORTHO05D007104 6.9e-19 96.7 53 79.2
Ciclev10015992m.g Citrus clementina HOM05D005657 ORTHO05D007104 9.0e-19 96.3 53 81.1
Potri.011G084000 Populus trichocarpa HOM05D005657 ORTHO05D007104 2.0e-18 95.1 53 83.0
MSTRG.16252 Avicennia marina HOM05D005657 ORTHO05D007104 7.6e-18 93.2 53 77.4
Hund15862 Selenicereus undatus HOM05D005657 ORTHO05D007104 7.6e-18 93.2 53 77.4
QL05p057428 Quercus lobata HOM05D005657 ORTHO05D007104 1.3e-17 92.4 65 69.2
Dinv30768 Davidia involucrata HOM05D005657 ORTHO05D007104 2.2e-17 91.7 53 79.2
Lsat_1_v5_gn_4_29400 Lactuca sativa HOM05D005657 ORTHO05D007104 2.9e-17 91.3 52 76.9
Nitab4.5_0000484g0050 Nicotiana tabacum HOM05D005657 ORTHO05D007104 2.9e-17 91.3 53 77.4
Nitab4.5_0000717g0030 Nicotiana tabacum HOM05D005657 ORTHO05D007104 2.9e-17 91.3 53 77.4
SalBow8G0891 Salvia bowleyana HOM05D005657 ORTHO05D007104 2.9e-17 91.3 53 75.5
Eucgr.E01441 Eucalyptus grandis HOM05D005657 ORTHO05D007104 3.8e-17 90.9 53 75.5
BcaB03g12197 Brassica carinata HOM05D005657 ORTHO05D007104 5.0e-17 90.5 53 77.4
PGR031G0971 Punica granatum HOM05D005657 ORTHO05D007104 8.5e-17 89.7 53 75.5
AT1G30130 Arabidopsis thaliana HOM05D005657 ORTHO05D007104 1.1e-16 89.4 53 73.6
CSS0046586 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 1.1e-16 89.4 53 71.7
Thhalv10008271m.g Eutrema salsugineum HOM05D005657 ORTHO05D007104 1.1e-16 89.4 53 73.6
Solyc05g053950.4 Solanum lycopersicum HOM05D005657 ORTHO05D007104 1.1e-16 89.4 53 75.5
Sopen05g032420 Solanum pennellii HOM05D005657 ORTHO05D007104 1.1e-16 89.4 53 75.5
Lalb_Chr18g0055371 Lupinus albus HOM05D005657 ORTHO05D007104 1.4e-16 89.0 53 69.8
Sabra11G0066600 Salix brachista HOM05D005657 ORTHO05D007104 1.4e-16 89.0 53 77.4
Actinidia07705 Actinidia chinensis HOM05D005657 ORTHO05D007104 2.5e-16 88.2 53 73.6
FAN16G0196 Fragaria x ananassa HOM05D005657 ORTHO05D007104 2.5e-16 88.2 65 69.2
CARHR029280 Cardamine hirsuta HOM05D005657 ORTHO05D007104 3.2e-16 87.8 53 75.5
Glyma.13G219000 Glycine max HOM05D005657 ORTHO05D007104 3.2e-16 87.8 53 69.8
HanXRQChr16g0525711 Helianthus annuus HOM05D005657 ORTHO05D007104 3.2e-16 87.8 53 73.6
GSVIVG01021513001 Vitis vinifera HOM05D005657 ORTHO05D007104 3.2e-16 87.8 53 75.5
DCAR_007885 Daucus carota HOM05D005657 ORTHO05D007104 4.2e-16 87.4 53 69.8
PGSC0003DMG401013075 Solanum tuberosum HOM05D005657 ORTHO05D007104 4.2e-16 87.4 53 73.6
Cc07_g20130 Coffea canephora HOM05D005657 ORTHO05D007104 5.5e-16 87.0 53 69.8
Sp1g25990 Schrenkiella parvula HOM05D005657 ORTHO05D007104 5.5e-16 87.0 53 71.7
FAN21G3134 Fragaria x ananassa HOM05D005657 ORTHO05D007104 7.2e-16 86.7 60 71.7
BcaC01g00157 Brassica carinata HOM05D005657 ORTHO05D007104 9.3e-16 86.3 53 71.7
C03p76410 Brassica napus HOM05D005657 ORTHO05D007104 9.3e-16 86.3 53 71.7
BolC3t19896H Brassica oleracea HOM05D005657 ORTHO05D007104 9.3e-16 86.3 53 71.7
BraA08t34424Z Brassica rapa HOM05D005657 ORTHO05D007104 9.3e-16 86.3 53 71.7
Actinidia39582 Actinidia chinensis HOM05D005657 ORTHO05D007104 1.2e-15 85.9 53 71.7
FAN25G2659 Fragaria x ananassa HOM05D005657 ORTHO05D007104 1.6e-15 85.5 60 71.7
Carub.0001s2836 Capsella rubella HOM05D005657 ORTHO05D007104 2.1e-15 85.1 53 71.7
FAN11G2536 Fragaria x ananassa HOM05D005657 ORTHO05D007104 2.1e-15 85.1 61 68.9
A08p24690 Brassica napus HOM05D005657 ORTHO05D007104 3.6e-15 84.3 53 69.8
FvH4_3g05380 Fragaria vesca HOM05D005657 ORTHO05D007104 4.6e-15 84.0 59 71.2
MD05G1282500 Malus domestica HOM05D005657 ORTHO05D007104 6.1e-15 83.6 59 67.8
MELO3C007126.2 Cucumis melo HOM05D005657 ORTHO05D007104 7.9e-15 83.2 53 67.9
Peaxi162Scf00394g00119 Petunia axillaris HOM05D005657 ORTHO05D007104 7.9e-15 83.2 53 67.9
Prupe.4G082300 Prunus persica HOM05D005657 ORTHO05D007104 7.9e-15 83.2 51 74.5
RcHm_v2.0_Chr5g0014371 Rosa chinensis HOM05D005657 ORTHO05D007104 7.9e-15 83.2 60 71.7
Aa31LG6G5550 Aethionema arabicum HOM05D005657 ORTHO05D007104 1.0e-14 82.8 53 69.8
Hma1.2p1_0020F.1_g014100 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 1.0e-14 82.8 53 71.7
Hma1.2p1_0020F.1_g014110 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 1.0e-14 82.8 53 71.7
TPR.G26242 Trifolium pratense HOM05D005657 ORTHO05D007104 1.0e-14 82.8 53 66.0
ECA234G1983 Erigeron canadensis HOM05D005657 ORTHO05D007104 1.3e-14 82.4 53 69.8
Phvul.006G165700 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 1.3e-14 82.4 53 64.2
CSS0036233 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 1.8e-14 82.0 51 68.6
CsaV3_6G051800 Cucumis sativus L. HOM05D005657 ORTHO05D007104 1.8e-14 82.0 53 67.9
Migut.D01761 Erythranthe guttata HOM05D005657 ORTHO05D007104 1.8e-14 82.0 53 71.7
Rhsim02G0159200 Rhododendron simsii HOM05D005657 ORTHO05D007104 1.8e-14 82.0 61 60.7
VMungo0540G0312 Vigna mungo HOM05D005657 ORTHO05D007104 2.3e-14 81.6 53 66.0
arahy.Tifrunner.gnm1.ann1.1GZ3A6 Arachis hypogaea HOM05D005657 ORTHO05D007104 3.0e-14 81.3 53 66.0
arahy.Tifrunner.gnm1.ann1.PL5EIV Arachis hypogaea HOM05D005657 ORTHO05D007104 3.0e-14 81.3 53 66.0
Glyma.15G093200 Glycine max HOM05D005657 ORTHO05D007104 3.9e-14 80.9 53 64.2
CAN.G1744.1 Capsicum annuum HOM05D005657 ORTHO05D007104 5.1e-14 80.5 53 71.7
ClCG01G024690 Citrullus lanatus HOM05D005657 ORTHO05D007104 5.1e-14 80.5 53 66.0
Oeu042460.1 Olea europaea HOM05D005657 ORTHO05D007104 8.7e-14 79.7 54 70.4
unitig_26.g9756 Utricularia gibba HOM05D005657 ORTHO05D007104 8.7e-14 79.7 53 67.9
Medtr2g019220 Medicago truncatula HOM05D005657 ORTHO05D007104 1.1e-13 79.3 53 64.2
vmacro10957 Vaccinium macrocarpon HOM05D005657 ORTHO05D007104 1.1e-13 79.3 53 67.9
TPR.G26236 Trifolium pratense HOM05D005657 ORTHO05D007104 1.5e-13 79.0 53 58.5
TPR.G26247 Trifolium pratense HOM05D005657 ORTHO05D007104 1.5e-13 79.0 53 62.3
Lj6g0016438 Lotus japonicus HOM05D005657 ORTHO05D007104 1.9e-13 78.6 53 60.4
Psat1g188200 Pisum sativum HOM05D005657 ORTHO05D007104 1.9e-13 78.6 53 64.2
SalBow2G2566 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.9e-13 78.6 53 67.9
TAR626G1592 Trochodendron aralioides HOM05D005657 ORTHO05D007104 1.9e-13 78.6 53 66.0
Ca_00535_v3 Cicer arietinum L. HOM05D005657 ORTHO05D007104 2.5e-13 78.2 53 64.2
TPR.G7274 Trifolium pratense HOM05D005657 ORTHO05D007104 2.5e-13 78.2 52 61.5
Ah.09g232540 Amaranthus hybridus HOM05D005657 ORTHO05D007104 3.3e-13 77.8 54 66.7
Sc24g0001740 Simmondsia chinensis HOM05D005657 ORTHO05D007104 7.4e-13 76.6 53 64.2
Manes.17G071500 Manihot esculenta HOM05D005657 ORTHO05D007104 2.2e-12 75.1 53 66.0
SalBow2G0785 Salvia bowleyana HOM05D005657 ORTHO05D007104 2.8e-12 74.7 53 64.2
AUR62002729 Chenopodium quinoa HOM05D005657 ORTHO05D007104 3.7e-12 74.3 51 68.6
EL10Ac8g19662 Beta vulgaris HOM05D005657 ORTHO05D007104 6.3e-12 73.6 54 61.1
CANSAT35G1510 Cannabis sativa HOM05D005657 ORTHO05D007104 6.3e-12 73.6 56 64.3
DCAR_027906 Daucus carota HOM05D005657 ORTHO05D007104 1.1e-11 72.8 52 67.3
Nn4g26588 Nelumbo nucifera HOM05D005657 ORTHO05D007104 1.1e-11 72.8 53 66.0
SalBow2G3627 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.4e-11 72.4 53 64.2
DCAR_027907 Daucus carota HOM05D005657 ORTHO05D007104 3.1e-11 71.2 53 66.0
Aqoxy1G01688 Aquilegia oxysepala HOM05D005657 ORTHO05D007104 5.3e-11 70.5 68 55.9
AUR62002725 Chenopodium quinoa HOM05D005657 ORTHO05D007104 1.2e-10 69.3 54 63.0
Sed0002032 Sechium edule HOM05D005657 ORTHO05D007104 1.2e-10 69.3 53 58.5
PSO339G2615 Papaver somniferum HOM05D005657 ORTHO05D007104 1.5e-10 68.9 58 56.9
PSO384G4094 Papaver somniferum HOM05D005657 ORTHO05D007104 2.6e-10 68.2 58 56.9
Pp3c19_5890 Physcomitrium patens HOM05D005657 ORTHO05D007104 5.9e-10 67.0 55 58.2
MBI18_g24473_MAGBIO Magnolia biondii HOM05D005657 ORTHO05D007104 2.2e-09 65.1 53 60.4
SMO364G0117 Selaginella moellendorffii HOM05D005657 ORTHO05D007104 2.9e-09 64.7 58 55.2
Mapoly0156s0023 Marchantia polymorpha HOM05D005657 ORTHO05D007104 6.5e-09 63.5 62 51.6
CDE01G0002 Ceratophyllum demersum HOM05D005657 ORTHO05D007104 8.5e-09 63.2 61 54.1
Zm00001eb300160 Zea mays HOM05D005657 ORTHO05D007104 4.2e-08 60.8 53 56.6
HPP92_012186 Vanilla planifolia HOM05D005657 ORTHO05D007104 5.5e-08 60.5 53 58.5
SEGI_34988 Sequoiadendron giganteum HOM05D005657 ORTHO05D007104 9.4e-08 59.7 58 48.3
Duzib160G0546 Durio zibethinus HOM05D005657 ORTHO05D007104 1.2e-07 59.3 38 71.1
ATR1098G050 Amborella trichopoda HOM05D005657 ORTHO05D007104 2.7e-07 58.2 60 45.0
AagrBONN_evm.TU.Sc2ySwM_117.1613 Anthoceros agrestis HOM05D001134 ORTHO05D001035 3.6e-07 57.8 58 50.0
CBR_g39195 Chara braunii HOM05D005657 ORTHO05D007104 1.4e-06 55.8 65 50.8


User provided reference genes

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