Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_31024 Corchorus olitorius HOM05D008566 ORTHO05D010165 1.2e-33 146.0 73 100.0
Thecc.06G146100 Theobroma cacao HOM05D008566 ORTHO05D010165 8.3e-16 86.7 69 71.0
Gohir.A05G146700 Gossypium hirsutum HOM05D008566 ORTHO05D010165 5.9e-14 80.5 73 64.4
Gohir.D05G149200 Gossypium hirsutum HOM05D008566 ORTHO05D010165 7.8e-14 80.1 75 64.0
Gorai.009G153200 Gossypium raimondii HOM05D008566 ORTHO05D010165 7.8e-14 80.1 75 64.0
Gohir.D10G044201 Gossypium hirsutum HOM05D010834 ORTHO05D010165 6.8e-10 67.0 69 58.0
Gorai.011G047200 Gossypium raimondii HOM05D010834 ORTHO05D010165 6.8e-10 67.0 69 58.0
Prupe.6G298100 Prunus persica HOM05D015167 ORTHO05D010165 1.5e-09 65.9 73 54.8
BcaB07g30854 Brassica carinata HOM05D008566 ORTHO05D010165 2.6e-09 65.1 76 46.1
BcaC04g21730 Brassica carinata HOM05D008566 ORTHO05D010165 3.4e-09 64.7 76 46.1
A06p46160 Brassica napus HOM05D008566 ORTHO05D010165 5.8e-09 63.9 76 43.4
BraA06t27480Z Brassica rapa HOM05D008566 ORTHO05D010165 5.8e-09 63.9 76 43.4
BolC9t55698H Brassica oleracea HOM05D008566 ORTHO05D010165 7.5e-09 63.5 76 44.7
A09p22100 Brassica napus HOM05D008566 ORTHO05D010165 1.3e-08 62.8 75 44.0
BraA09t37815Z Brassica rapa HOM05D008566 ORTHO05D010165 1.3e-08 62.8 75 44.0
Carub.0008s0178 Capsella rubella HOM05D008566 ORTHO05D010165 1.7e-08 62.4 76 44.7
CARHR175660 Cardamine hirsuta HOM05D008566 ORTHO05D010165 2.9e-08 61.6 72 45.8
Sp2g11000 Schrenkiella parvula HOM05D008566 ORTHO05D010165 2.9e-08 61.6 74 41.9
AL8G12340 Arabidopsis lyrata HOM05D008566 ORTHO05D010165 4.9e-08 60.8 76 43.4
C02p47100 Brassica napus HOM05D008566 ORTHO05D010165 4.9e-08 60.8 76 40.8
BolC2t10757H Brassica oleracea HOM05D008566 ORTHO05D010165 4.9e-08 60.8 76 40.8
BcaC03g16834 Brassica carinata HOM05D008566 ORTHO05D010165 6.4e-08 60.5 76 40.8
A02p29720 Brassica napus HOM05D008566 ORTHO05D010165 6.4e-08 60.5 76 40.8
BraA02t07995Z Brassica rapa HOM05D008566 ORTHO05D010165 6.4e-08 60.5 76 40.8
BcaC06g31495 Brassica carinata HOM05D008566 ORTHO05D010165 1.4e-07 59.3 76 42.1
BolC7t43472H Brassica oleracea HOM05D008566 ORTHO05D010165 1.9e-07 58.9 76 42.1
Haze_05645 Corylus avellana HOM05D015167 ORTHO05D010165 2.4e-07 58.5 71 49.3
FAN16G3108 Fragaria x ananassa HOM05D015167 ORTHO05D010165 3.2e-07 58.2 78 47.4
Prupe.4G084700 Prunus persica HOM05D015167 ORTHO05D010165 4.1e-07 57.8 74 48.6
FAN21G3853 Fragaria x ananassa HOM05D015167 ORTHO05D010165 5.4e-07 57.4 78 47.4
C07p29300 Brassica napus HOM05D008566 ORTHO05D010165 7.0e-07 57.0 76 40.8
Cfa000909 Carpinus fangiana HOM05D015167 ORTHO05D010165 7.0e-07 57.0 71 47.9
FAN25G0863 Fragaria x ananassa HOM05D015167 ORTHO05D010165 7.0e-07 57.0 78 47.4
Lalb_Chr07g0187531 Lupinus albus HOM05D013029 ORTHO05D010165 9.2e-07 56.6 73 52.1
Hma1.2p1_0594F.1_g185930 Hydrangea macrophylla HOM05D010834 ORTHO05D013314 1.2e-06 56.2 66 50.0
Gorai.011G046900 Gossypium raimondii HOM05D010834 ORTHO05D013314 1.6e-06 55.8 69 43.5
Potri.011G082050 Populus trichocarpa HOM05D013029 ORTHO05D010165 1.6e-06 55.8 71 49.3
COL.COLO4_31025 Corchorus olitorius HOM05D010834 ORTHO05D013314 2.0e-06 55.5 70 45.7
A03p51270 Brassica napus HOM05D008566 ORTHO05D010165 3.5e-06 54.7 75 45.3
BraA03t14209Z Brassica rapa HOM05D008566 ORTHO05D010165 3.5e-06 54.7 75 45.3
Lj6g0021403 Lotus japonicus HOM05D011867 ORTHO05D013086 4.6e-06 54.3 70 47.1
AL7G35940 Arabidopsis lyrata HOM05D008566 ORTHO05D010165 6.0e-06 53.9 75 45.3
Manes.15G124200 Manihot esculenta HOM05D008566 ORTHO05D010165 6.0e-06 53.9 81 44.4
BcaNung02703 Brassica carinata HOM05D008566 ORTHO05D010165 7.8e-06 53.5 75 45.3
BolC7t45469H Brassica oleracea HOM05D008566 ORTHO05D010165 7.8e-06 53.5 75 45.3
CARHR225230 Cardamine hirsuta HOM05D008566 ORTHO05D010165 7.8e-06 53.5 75 45.3


User provided reference genes

Program Settings