Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_30833 Corchorus olitorius HOM05D005068 ORTHO05D007561 0.0e+00 1131.7 590 100.0
Gohir.A10G051500 Gossypium hirsutum HOM05D005068 ORTHO05D007561 1.3e-265 919.5 584 82.9
Gorai.011G056800 Gossypium raimondii HOM05D005068 ORTHO05D007561 1.3e-263 912.9 583 82.0
Gohir.D10G053200 Gossypium hirsutum HOM05D005068 ORTHO05D007561 8.1e-263 910.2 583 81.8
Thecc.06G127400 Theobroma cacao HOM05D005068 ORTHO05D007561 1.8e-257 892.5 597 80.6
Manes.09G018800 Manihot esculenta HOM05D005068 ORTHO05D007561 1.3e-228 796.6 606 70.0
Potri.001G164100 Populus trichocarpa HOM05D005068 ORTHO05D007561 3.1e-222 775.4 595 70.6
arahy.Tifrunner.gnm1.ann1.JS5XG8 Arachis hypogaea HOM05D005068 ORTHO05D007561 2.7e-221 772.3 585 71.5
Eucgr.J02606 Eucalyptus grandis HOM05D005068 ORTHO05D007561 9.4e-219 763.8 591 69.4
Phvul.010G125200 Phaseolus vulgaris HOM05D005068 ORTHO05D007561 1.6e-218 763.1 591 70.7
TAR628G1511 Trochodendron aralioides HOM05D005068 ORTHO05D007561 2.1e-218 762.7 583 69.3
Glyma.07G043700 Glycine max HOM05D005068 ORTHO05D007561 1.8e-217 759.6 586 69.8
QL05p001958 Quercus lobata HOM05D005068 ORTHO05D007561 3.0e-217 758.8 614 67.3
Sed0003275 Sechium edule HOM05D005068 ORTHO05D007561 3.0e-217 758.8 582 70.3
CANSAT01G1537 Cannabis sativa HOM05D005068 ORTHO05D007561 1.5e-216 756.5 585 70.1
GSVIVG01016696001 Vitis vinifera HOM05D005068 ORTHO05D007561 2.6e-216 755.7 581 69.7
VMungo0331G1431 Vigna mungo HOM05D005068 ORTHO05D007561 1.3e-215 753.4 583 70.7
Prupe.3G034700 Prunus persica HOM05D005068 ORTHO05D007561 8.3e-215 750.7 590 69.2
MELO3C024322.2 Cucumis melo HOM05D005068 ORTHO05D007561 1.8e-214 749.6 580 70.0
CSS0009347 Camellia sinensis var. sinensis HOM05D005068 ORTHO05D007561 1.6e-213 746.5 588 69.2
PGR102G2847 Punica granatum HOM05D005068 ORTHO05D007561 1.6e-213 746.5 581 69.2
CSS0048439 Camellia sinensis var. sinensis HOM05D005068 ORTHO05D007561 2.7e-213 745.7 588 69.2
Ciclev10024779m.g Citrus clementina HOM05D005068 ORTHO05D007561 4.5e-213 745.0 617 66.9
Sed0017975 Sechium edule HOM05D005068 ORTHO05D007561 7.7e-213 744.2 580 68.8
CiPaw.01G213900 Carya illinoinensis HOM05D005068 ORTHO05D007561 2.9e-212 742.3 623 67.3
Nitab4.5_0009947g0020 Nicotiana tabacum HOM05D005068 ORTHO05D007561 5.0e-212 741.5 585 67.5
Atru.chr1.4129 Acer truncatum HOM05D005068 ORTHO05D007561 8.5e-212 740.7 608 67.8
Nitab4.5_0003981g0040 Nicotiana tabacum HOM05D005068 ORTHO05D007561 5.5e-211 738.0 582 67.4
MD09G1175700 Malus domestica HOM05D005068 ORTHO05D007561 7.2e-211 737.6 586 67.4
Psat2g016360 Pisum sativum HOM05D005068 ORTHO05D007561 7.2e-211 737.6 590 68.5
Medtr5g019130 Medicago truncatula HOM05D005068 ORTHO05D007561 8.0e-210 734.2 591 67.7
MD17G1151100 Malus domestica HOM05D005068 ORTHO05D007561 1.0e-209 733.8 586 66.9
CsaV3_7G034120 Cucumis sativus L. HOM05D005068 ORTHO05D007561 2.6e-208 729.2 581 69.0
Lsat_1_v5_gn_5_136720 Lactuca sativa HOM05D005068 ORTHO05D007561 7.5e-208 727.6 589 66.2
THA.LOC104808063 Tarenaya hassleriana HOM05D005068 ORTHO05D007561 2.8e-207 725.7 602 65.9
Cpa.g.sc25.173 Carica papaya HOM05D005068 ORTHO05D007561 6.3e-207 724.5 595 68.2
Cc04_g00890 Coffea canephora HOM05D005068 ORTHO05D007561 6.3e-207 724.5 578 66.4
Lj3g0023295 Lotus japonicus HOM05D005068 ORTHO05D007561 1.4e-206 723.4 576 68.2
Cfa003490 Carpinus fangiana HOM05D005068 ORTHO05D007561 1.2e-205 720.3 615 65.9
Lalb_Chr04g0253821 Lupinus albus HOM05D005068 ORTHO05D007561 1.2e-205 720.3 535 71.0
CAN.G790.67 Capsicum annuum HOM05D005068 ORTHO05D007561 2.7e-205 719.2 575 66.4
AL2G32110 Arabidopsis lyrata HOM05D005068 ORTHO05D007561 4.5e-205 718.4 593 66.4
TWI59G1220 Tripterygium wilfordii HOM05D005068 ORTHO05D007561 1.0e-204 717.2 639 63.5
Aqoxy1G00349 Aquilegia oxysepala HOM05D005068 ORTHO05D007561 3.8e-204 715.3 580 66.0
Solyc03g123530.4 Solanum lycopersicum HOM05D005068 ORTHO05D007561 3.8e-204 715.3 579 65.8
Sp5g27520 Schrenkiella parvula HOM05D005068 ORTHO05D007561 6.6e-204 714.5 598 65.9
Medtr4g119670 Medicago truncatula HOM05D005068 ORTHO05D007561 1.5e-203 713.4 595 65.9
PSO339G5314 Papaver somniferum HOM05D005068 ORTHO05D007561 5.6e-203 711.4 619 62.4
Hund18654 Selenicereus undatus HOM05D005068 ORTHO05D007561 9.5e-203 710.7 589 66.4
HanXRQChr12g0360151 Helianthus annuus HOM05D005068 ORTHO05D007561 1.2e-202 710.3 575 65.6
Sopen03g041300 Solanum pennellii HOM05D005068 ORTHO05D007561 2.1e-202 709.5 585 65.0
CARHR065370 Cardamine hirsuta HOM05D005068 ORTHO05D007561 2.8e-202 709.1 602 65.3
Peaxi162Scf00038g02247 Petunia axillaris HOM05D005068 ORTHO05D007561 6.1e-202 708.0 589 66.7
Sabra01G0128700 Salix brachista HOM05D005068 ORTHO05D007561 1.0e-201 707.2 592 67.2
Carub.0002s1929 Capsella rubella HOM05D005068 ORTHO05D007561 1.8e-201 706.4 598 65.6
Glyma.16G012100 Glycine max HOM05D005068 ORTHO05D007561 2.3e-201 706.1 586 66.0
TPR.G16658 Trifolium pratense HOM05D005068 ORTHO05D007561 2.3e-201 706.1 598 64.5
AT1G72440 Arabidopsis thaliana HOM05D005068 ORTHO05D007561 5.2e-201 704.9 593 65.1
PSO384G5027 Papaver somniferum HOM05D005068 ORTHO05D007561 1.2e-200 703.7 617 62.1
MSTRG.22527 Avicennia marina HOM05D005068 ORTHO05D007561 9.8e-200 700.7 582 64.8
Lj5A31T61 Lonicera japonica HOM05D005068 ORTHO05D007561 8.3e-199 697.6 636 62.6
Thhalv10018056m.g Eutrema salsugineum HOM05D005068 ORTHO05D007561 1.1e-198 697.2 596 64.3
BcaC08g46695 Brassica carinata HOM05D005068 ORTHO05D007561 1.8e-198 696.4 586 65.7
AUR62009935 Chenopodium quinoa HOM05D005068 ORTHO05D007561 1.2e-197 693.7 602 62.5
EL10Ac7g16459 Beta vulgaris HOM05D005068 ORTHO05D007561 1.6e-197 693.3 620 61.1
SalBow6G5915 Salvia bowleyana HOM05D005068 ORTHO05D007561 1.6e-197 693.3 604 62.6
FAN14G5424 Fragaria x ananassa HOM05D005068 ORTHO05D007561 1.3e-196 690.3 587 65.1
ECA234G0903 Erigeron canadensis HOM05D005068 ORTHO05D007561 3.0e-196 689.1 583 63.3
FvH4_6g35460 Fragaria vesca HOM05D005068 ORTHO05D007561 6.6e-196 688.0 592 64.9
FAN09G4827 Fragaria x ananassa HOM05D005068 ORTHO05D007561 8.6e-196 687.6 592 64.9
BcaB03g14995 Brassica carinata HOM05D005068 ORTHO05D007561 5.6e-195 684.9 591 65.3
C06p46800 Brassica napus HOM05D005068 ORTHO05D007561 1.2e-194 683.7 593 64.8
BolC6t39723H Brassica oleracea HOM05D005068 ORTHO05D007561 3.6e-194 682.2 602 64.0
Ca_23422_v3 Cicer arietinum L. HOM05D005068 ORTHO05D007561 8.0e-194 681.0 602 63.8
Ca_30848_v3 Cicer arietinum L. HOM05D005068 ORTHO05D007561 8.0e-194 681.0 602 63.8
FAN05G3041 Fragaria x ananassa HOM05D005068 ORTHO05D007561 3.1e-193 679.1 591 64.5
Oeu000383.1 Olea europaea HOM05D005068 ORTHO05D007561 2.6e-192 676.0 550 64.9
arahy.Tifrunner.gnm1.ann1.X03KN2 Arachis hypogaea HOM05D005068 ORTHO05D007561 8.3e-191 671.0 581 64.2
Peaxi162Scf00535g00325 Petunia axillaris HOM05D005068 ORTHO05D007561 9.2e-190 667.5 581 63.9
RcHm_v2.0_Chr2g0147011 Rosa chinensis HOM05D005068 ORTHO05D007561 2.0e-189 666.4 588 63.3
Aa31LG4G2770 Aethionema arabicum HOM05D005068 ORTHO05D007561 1.9e-187 659.8 603 61.5
AUR62001432 Chenopodium quinoa HOM05D005068 ORTHO05D007561 4.3e-187 658.7 577 62.0
ClCG09G001250 Citrullus lanatus HOM05D005068 ORTHO05D007561 7.3e-187 657.9 572 64.7
vmacro15071 Vaccinium macrocarpon HOM05D005068 ORTHO05D007561 1.8e-185 653.3 595 62.9
DCAR_026429 Daucus carota HOM05D005068 ORTHO05D007561 6.8e-185 651.4 607 61.4
unitig_26.g8921 Utricularia gibba HOM05D005068 ORTHO05D007561 2.0e-184 649.8 593 60.9
CDE05G0629 Ceratophyllum demersum HOM05D005068 ORTHO05D007561 2.6e-184 649.4 577 61.0
MBI13_g01677_MAGBIO Magnolia biondii HOM05D005068 ORTHO05D007561 1.3e-183 647.1 574 60.8
FAN02G4153 Fragaria x ananassa HOM05D005068 ORTHO05D007561 2.2e-183 646.4 596 62.6
HPP92_014041 Vanilla planifolia HOM05D005068 ORTHO05D007561 1.9e-182 643.3 596 58.1
Haze_16103 Corylus avellana HOM05D005068 ORTHO05D007561 1.3e-180 637.1 751 52.5
BraA07t31420Z Brassica rapa HOM05D005068 ORTHO05D007561 1.7e-180 636.7 596 61.1
A07p38620 Brassica napus HOM05D005068 ORTHO05D007561 1.1e-179 634.0 567 63.1
Rhsim08G0242500 Rhododendron simsii HOM05D005068 ORTHO05D007561 2.1e-178 629.8 571 62.2
Zm00001eb008900 Zea mays HOM05D005068 ORTHO05D007561 1.1e-171 607.4 587 57.6
Dinv37834 Davidia involucrata HOM05D005068 ORTHO05D007561 3.3e-171 605.9 500 67.0
Os09g0116400 Oryza sativa ssp. japonica HOM05D005068 ORTHO05D007561 1.2e-170 604.0 585 58.3
ATR0317G028 Amborella trichopoda HOM05D005068 ORTHO05D007561 2.9e-167 592.8 589 56.9
SEGI_35987 Sequoiadendron giganteum HOM05D005068 ORTHO05D007561 1.2e-165 587.4 600 56.3
Nn8g38536 Nelumbo nucifera HOM05D005068 ORTHO05D007561 2.6e-160 569.7 592 54.6
SGA_v2.0_scaffold71G23904 Striga asiatica HOM05D005068 ORTHO05D007561 4.3e-155 552.4 588 55.1
SHI38508 Sapria himalayana HOM05D005068 ORTHO05D007561 1.0e-148 531.2 547 54.3
vmacro14086 Vaccinium macrocarpon HOM05D005068 ORTHO05D007561 4.3e-147 525.8 386 72.5
Actinidia21819 Actinidia chinensis HOM05D005068 ORTHO05D007561 7.4e-147 525.0 453 62.5
Nitab4.5_0007072g0030 Nicotiana tabacum HOM05D005068 ORTHO05D007561 2.8e-146 523.1 369 72.1
Sc12g0010810 Simmondsia chinensis HOM05D005068 ORTHO05D007561 5.9e-136 488.8 579 52.8
AagrBONN_evm.TU.Sc2ySwM_228.3616 Anthoceros agrestis HOM05D005068 ORTHO05D007561 3.8e-135 486.1 635 45.2
Mapoly0001s0039 Marchantia polymorpha HOM05D005068 ORTHO05D007561 8.2e-130 468.4 595 47.6
Pp3c8_7540 Physcomitrium patens HOM05D005068 ORTHO05D007561 2.5e-126 456.8 647 42.8
Migut.I01119 Erythranthe guttata HOM05D005068 ORTHO05D007561 5.9e-112 409.1 587 45.5
CBR_g4353 Chara braunii HOM05D005068 ORTHO05D007561 2.9e-111 406.8 470 45.7
TAR383G0209 Trochodendron aralioides HOM05D005068 ORTHO05D007561 5.0e-111 406.0 265 79.2
CDE11G0362 Ceratophyllum demersum HOM05D005068 ORTHO05D007561 8.3e-98 362.1 365 55.6
SMO356G0436 Selaginella moellendorffii HOM05D005068 ORTHO05D007561 1.5e-91 341.3 577 39.5
Haze_25369 Corylus avellana HOM05D005068 ORTHO05D007561 2.0e-83 314.3 550 39.6
TAR383G0400 Trochodendron aralioides HOM05D005068 ORTHO05D007561 9.8e-83 312.0 310 53.5
ECA234G3781 Erigeron canadensis HOM05D005068 ORTHO05D007561 2.7e-80 303.9 300 56.3
Cre10.g459600 Chlamydomonas reinhardtii HOM05D005068 ORTHO05D007561 3.0e-79 300.4 471 39.9
Cc00_g06320 Coffea canephora HOM05D005068 ORTHO05D007561 7.1e-65 252.7 189 69.8
CDE11G1047 Ceratophyllum demersum HOM05D005068 ORTHO05D007561 2.8e-61 240.7 194 63.4
PRCOL_00007240 Prasinoderma coloniale HOM05D005068 ORTHO05D007561 4.0e-60 236.9 400 39.5
Cfa026526 Carpinus fangiana HOM05D005068 ORTHO05D007561 6.8e-60 236.1 450 35.8
FAN23G2170 Fragaria x ananassa HOM05D005068 ORTHO05D007561 3.6e-53 213.8 180 64.4
PGSC0003DMG400009145 Solanum tuberosum HOM05D005068 ORTHO05D007561 9.9e-51 205.7 146 73.3
vmacro14085 Vaccinium macrocarpon HOM05D005068 ORTHO05D007561 1.3e-50 205.3 238 52.9
Psat7g194960 Pisum sativum HOM05D005068 ORTHO05D030493 3.8e-34 150.6 152 59.2
Psat7g194920 Pisum sativum HOM05D005068 ORTHO05D030493 1.9e-33 148.3 152 59.9
Dinv37835 Davidia involucrata HOM05D005068 ORTHO05D007561 1.1e-30 139.0 96 79.2
HanXRQChr04g0122031 Helianthus annuus HOM05D005068 ORTHO05D007561 4.8e-29 133.7 132 56.8
ECA233G2064 Erigeron canadensis HOM05D005068 ORTHO05D007561 1.1e-17 95.9 81 59.3
Hund18058 Selenicereus undatus HOM05D005068 ORTHO05D030493 7.7e-11 73.2 114 47.4
SHI25215 Sapria himalayana HOM05D005068 ORTHO05D007561 1.4e-09 68.9 106 40.6


User provided reference genes

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