Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_30599 Corchorus olitorius HOM05D004267 ORTHO05D044750 9.6e-109 396.7 188 100.0
Thecc.06G107200 Theobroma cacao HOM05D004267 ORTHO05D044750 1.1e-35 154.1 123 57.7
Oeu036354.1 Olea europaea HOM05D004267 ORTHO05D005267 4.2e-11 72.4 132 33.3
Sc06g0000890 Simmondsia chinensis HOM05D004267 ORTHO05D005267 4.2e-11 72.4 136 32.4
Aa31LG2G6480 Aethionema arabicum HOM05D004267 ORTHO05D005267 1.6e-10 70.5 170 32.4
Psat6g019000 Pisum sativum HOM05D004267 ORTHO05D005267 1.6e-10 70.5 136 31.6
THA.LOC104803799 Tarenaya hassleriana HOM05D004267 ORTHO05D005267 1.6e-10 70.5 171 30.4
Aa31sc248G70 Aethionema arabicum HOM05D004267 ORTHO05D005267 2.1e-10 70.1 168 30.4
MSTRG.1674 Avicennia marina HOM05D004267 ORTHO05D005267 4.6e-10 68.9 134 32.1
Sabra06G0181900 Salix brachista HOM05D004267 ORTHO05D005267 4.6e-10 68.9 142 31.0
Zm00001eb356880 Zea mays HOM05D004267 ORTHO05D005267 4.6e-10 68.9 132 34.1
DCAR_000778 Daucus carota HOM05D004267 ORTHO05D005267 6.0e-10 68.6 132 34.1
BolC1t00557H Brassica oleracea HOM05D004267 ORTHO05D005267 7.9e-10 68.2 170 31.2
BraA01t00509Z Brassica rapa HOM05D004267 ORTHO05D005267 7.9e-10 68.2 170 31.2
BcaNung02146 Brassica carinata HOM05D004267 ORTHO05D005267 1.0e-09 67.8 136 34.6
A01p05350 Brassica napus HOM05D004267 ORTHO05D005267 1.3e-09 67.4 134 34.3
CiPaw.15G042300 Carya illinoinensis HOM05D004267 ORTHO05D005267 1.3e-09 67.4 134 30.6
Lj5g0002830 Lotus japonicus HOM05D004267 ORTHO05D005267 1.3e-09 67.4 136 31.6
A03p61690 Brassica napus HOM05D004267 ORTHO05D005267 1.8e-09 67.0 170 31.2
C01p05770 Brassica napus HOM05D004267 ORTHO05D005267 1.8e-09 67.0 170 31.2
C07p59420 Brassica napus HOM05D004267 ORTHO05D005267 1.8e-09 67.0 170 31.2
Ca_13187_v3 Cicer arietinum L. HOM05D004267 ORTHO05D005267 1.8e-09 67.0 136 32.4
Peaxi162Scf00247g00612 Petunia axillaris HOM05D004267 ORTHO05D005267 2.3e-09 66.6 170 30.6
Solyc11g070060.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 2.3e-09 66.6 149 30.2
Glyma.14G092300 Glycine max HOM05D004267 ORTHO05D005267 3.9e-09 65.9 136 32.4
Phvul.001G033101 Phaseolus vulgaris HOM05D004267 ORTHO05D005267 3.9e-09 65.9 134 30.6
VMungo0647G2384 Vigna mungo HOM05D004267 ORTHO05D005267 3.9e-09 65.9 170 30.6
Hma1.2p1_1213F.1_g267510 Hydrangea macrophylla HOM05D004267 ORTHO05D005267 5.1e-09 65.5 132 30.3
FvH4_2g32260 Fragaria vesca HOM05D004267 ORTHO05D005267 6.7e-09 65.1 130 33.1
TPR.G12986 Trifolium pratense HOM05D004267 ORTHO05D005267 6.7e-09 65.1 136 30.9
Glyma.17G231200 Glycine max HOM05D004267 ORTHO05D005267 8.7e-09 64.7 136 32.4
Medtr1g016900 Medicago truncatula HOM05D004267 ORTHO05D005267 8.7e-09 64.7 136 30.9
TAR636G0904 Trochodendron aralioides HOM05D004267 ORTHO05D005267 8.7e-09 64.7 134 31.3
AL7G18760 Arabidopsis lyrata HOM05D004267 ORTHO05D005267 1.1e-08 64.3 170 30.6
Carub.0007s0755 Capsella rubella HOM05D004267 ORTHO05D005267 1.1e-08 64.3 170 30.6
Sp7g30710 Schrenkiella parvula HOM05D004267 ORTHO05D005267 1.5e-08 63.9 170 30.6
BcaC09g52093 Brassica carinata HOM05D004267 ORTHO05D005267 1.9e-08 63.5 170 30.0
Actinidia18200 Actinidia chinensis HOM05D004267 ORTHO05D005267 2.5e-08 63.2 151 29.8
Thhalv10025837m.g Eutrema salsugineum HOM05D004267 ORTHO05D005267 2.5e-08 63.2 175 31.4
AT4G32930 Arabidopsis thaliana HOM05D004267 ORTHO05D005267 3.3e-08 62.8 170 30.0
FAN15G2319 Fragaria x ananassa HOM05D004267 ORTHO05D005267 4.3e-08 62.4 162 30.9
Actinidia14699 Actinidia chinensis HOM05D004267 ORTHO05D005267 7.4e-08 61.6 132 31.1
BraA03t15208Z Brassica rapa HOM05D004267 ORTHO05D005267 7.4e-08 61.6 173 30.6
FAN24G0417 Fragaria x ananassa HOM05D004267 ORTHO05D005267 9.6e-08 61.2 168 30.4
GSVIVG01035339001 Vitis vinifera HOM05D004267 ORTHO05D005267 9.6e-08 61.2 134 30.6
Cc08_g10140 Coffea canephora HOM05D004267 ORTHO05D005267 2.8e-07 59.7 132 30.3
HPP92_004580 Vanilla planifolia HOM05D004267 ORTHO05D005267 2.8e-07 59.7 134 30.6
Lalb_Chr14g0367901 Lupinus albus HOM05D004267 ORTHO05D005267 3.7e-07 59.3 134 29.9
Nn6g35383 Nelumbo nucifera HOM05D004267 ORTHO05D005267 4.8e-07 58.9 125 28.8
vmacro05276 Vaccinium macrocarpon HOM05D004267 ORTHO05D005267 4.8e-07 58.9 140 30.0
Atru.chr7.2026 Acer truncatum HOM05D004267 ORTHO05D005267 1.8e-06 57.0 132 29.5


User provided reference genes

Program Settings