Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_30106 Corchorus olitorius HOM05D005987 ORTHO05D007233 1.3e-57 226.1 110 100.0
Thecc.03G019200 Theobroma cacao HOM05D005987 ORTHO05D007233 2.6e-37 158.7 98 82.7
Gohir.A09G172600 Gossypium hirsutum HOM05D005987 ORTHO05D007233 2.1e-31 139.0 98 74.5
Gorai.006G189900 Gossypium raimondii HOM05D005987 ORTHO05D007233 1.8e-30 136.0 98 72.4
Gohir.D09G168300 Gossypium hirsutum HOM05D005987 ORTHO05D007233 2.3e-30 135.6 98 71.4
Manes.14G063300 Manihot esculenta HOM05D005987 ORTHO05D007233 1.1e-24 116.7 99 62.6
TAR371G0908 Trochodendron aralioides HOM05D005987 ORTHO05D007233 9.5e-24 113.6 98 61.2
Ciclev10021762m.g Citrus clementina HOM05D005987 ORTHO05D007233 2.8e-23 112.1 98 61.2
Atru.chr9.2528 Acer truncatum HOM05D005987 ORTHO05D007233 3.6e-23 111.7 85 69.4
Sabra15G0104300 Salix brachista HOM05D005987 ORTHO05D007233 3.6e-23 111.7 99 60.6
Atru.chr9.2531 Acer truncatum HOM05D005987 ORTHO05D007233 6.2e-23 110.9 85 69.4
GSVIVG01007695001 Vitis vinifera HOM05D005987 ORTHO05D007233 8.1e-23 110.5 74 73.0
TWI39G0642 Tripterygium wilfordii HOM05D005987 ORTHO05D007233 1.1e-22 110.2 70 77.1
Potri.015G080100 Populus trichocarpa HOM05D005987 ORTHO05D007233 3.1e-22 108.6 99 57.6
arahy.Tifrunner.gnm1.ann1.T968NY Arachis hypogaea HOM05D005987 ORTHO05D007233 6.8e-22 107.5 76 73.7
Dinv20627 Davidia involucrata HOM05D005987 ORTHO05D007233 8.9e-22 107.1 99 61.6
Dinv38561 Davidia involucrata HOM05D005987 ORTHO05D007233 8.9e-22 107.1 97 62.9
Lalb_Chr12g0201721 Lupinus albus HOM05D005987 ORTHO05D007233 1.2e-21 106.7 90 63.3
Cfa019170 Carpinus fangiana HOM05D005987 ORTHO05D007233 1.5e-21 106.3 99 61.6
Psat4g058760 Pisum sativum HOM05D005987 ORTHO05D007233 1.5e-21 106.3 84 66.7
TWI14G0473 Tripterygium wilfordii HOM05D005987 ORTHO05D007233 2.0e-21 105.9 70 74.3
arahy.Tifrunner.gnm1.ann1.9L10M3 Arachis hypogaea HOM05D005987 ORTHO05D007233 2.6e-21 105.5 76 72.4
MELO3C026282.2 Cucumis melo HOM05D005987 ORTHO05D007233 2.6e-21 105.5 84 64.3
Medtr4g105450 Medicago truncatula HOM05D005987 ORTHO05D007233 3.4e-21 105.1 84 64.3
THA.LOC104798969 Tarenaya hassleriana HOM05D005987 ORTHO05D007233 3.4e-21 105.1 71 66.2
QL10p008901 Quercus lobata HOM05D005987 ORTHO05D007233 4.4e-21 104.8 87 66.7
TPR.G37573 Trifolium pratense HOM05D005987 ORTHO05D007233 5.8e-21 104.4 84 61.9
ClCG06G017140 Citrullus lanatus HOM05D005987 ORTHO05D007233 7.6e-21 104.0 84 63.1
Ca_21942_v3 Cicer arietinum L. HOM05D005987 ORTHO05D007233 1.3e-20 103.2 71 71.8
Thhalv10004783m.g Eutrema salsugineum HOM05D005987 ORTHO05D007233 1.3e-20 103.2 82 63.4
MBI16_g14601_MAGBIO Magnolia biondii HOM05D005987 ORTHO05D007233 1.3e-20 103.2 92 60.9
CsaV3_1G001340 Cucumis sativus L. HOM05D005987 ORTHO05D007233 1.7e-20 102.8 84 61.9
Lj4g0021830 Lotus japonicus HOM05D005987 ORTHO05D007233 1.7e-20 102.8 71 71.8
Sp2g26190 Schrenkiella parvula HOM05D005987 ORTHO05D007233 1.7e-20 102.8 82 63.4
arahy.Tifrunner.gnm1.ann1.2X5BV9 Arachis hypogaea HOM05D005987 ORTHO05D007233 2.2e-20 102.4 79 69.6
Carub.0008s2377 Capsella rubella HOM05D005987 ORTHO05D007233 2.2e-20 102.4 82 64.6
HanXRQChr03g0068941 Helianthus annuus HOM05D005987 ORTHO05D007233 2.2e-20 102.4 69 72.5
Medtr4g105460 Medicago truncatula HOM05D005987 ORTHO05D007233 2.2e-20 102.4 56 83.9
TPR.G37495 Trifolium pratense HOM05D005987 ORTHO05D007233 2.2e-20 102.4 74 68.9
FAN13G1898 Fragaria x ananassa HOM05D005987 ORTHO05D007233 4.9e-20 101.3 95 60.0
Aqoxy1G03751 Aquilegia oxysepala HOM05D005987 ORTHO05D007233 8.4e-20 100.5 68 72.1
Aqoxy3G02835 Aquilegia oxysepala HOM05D005987 ORTHO05D007233 8.4e-20 100.5 68 72.1
AT5G63060 Arabidopsis thaliana HOM05D005987 ORTHO05D007233 8.4e-20 100.5 82 64.6
BcaB04g19948 Brassica carinata HOM05D005987 ORTHO05D007233 8.4e-20 100.5 72 69.4
SGA_v2.0_scaffold116G32224 Striga asiatica HOM05D005987 ORTHO05D007233 8.4e-20 100.5 81 63.0
SGA_v2.0_scaffold90G27882 Striga asiatica HOM05D005987 ORTHO05D007233 8.4e-20 100.5 81 63.0
A09p08010 Brassica napus HOM05D005987 ORTHO05D007233 1.1e-19 100.1 86 61.6
BraA09t36453Z Brassica rapa HOM05D005987 ORTHO05D007233 1.1e-19 100.1 86 61.6
CARHR276860 Cardamine hirsuta HOM05D005987 ORTHO05D007233 1.1e-19 100.1 70 70.0
ECA240G0310 Erigeron canadensis HOM05D000306 ORTHO05D007657 1.1e-19 100.1 80 67.5
Psat4g058800 Pisum sativum HOM05D005987 ORTHO05D007233 1.4e-19 99.8 84 59.5
MSTRG.4360 Avicennia marina HOM05D005987 ORTHO05D007233 1.9e-19 99.4 88 60.2
FvH4_5g05710 Fragaria vesca HOM05D005987 ORTHO05D007233 1.9e-19 99.4 95 60.0
FAN08G2261 Fragaria x ananassa HOM05D005987 ORTHO05D007233 1.9e-19 99.4 95 60.0
FAN18G2319 Fragaria x ananassa HOM05D005987 ORTHO05D007233 1.9e-19 99.4 95 60.0
Lsat_1_v5_gn_7_54241 Lactuca sativa HOM05D005987 ORTHO05D007233 1.9e-19 99.4 66 72.7
BcaC04g23367 Brassica carinata HOM05D005987 ORTHO05D007233 2.4e-19 99.0 82 62.2
C09p09060 Brassica napus HOM05D005987 ORTHO05D007233 2.4e-19 99.0 82 62.2
BolC9t53819H Brassica oleracea HOM05D005987 ORTHO05D007233 2.4e-19 99.0 82 62.2
Oeu016421.1 Olea europaea HOM05D005987 ORTHO05D007233 2.4e-19 99.0 87 58.6
Sed0001492 Sechium edule HOM05D005987 ORTHO05D007233 3.2e-19 98.6 67 70.1
TAR629G2107 Trochodendron aralioides HOM05D005987 ORTHO05D007233 4.1e-19 98.2 92 60.9
DCAR_016038 Daucus carota HOM05D005987 ORTHO05D007233 5.4e-19 97.8 91 61.5
MD06G1170600 Malus domestica HOM05D005987 ORTHO05D007233 7.1e-19 97.4 66 72.7
RcHm_v2.0_Chr7g0193121 Rosa chinensis HOM05D005987 ORTHO05D007233 7.1e-19 97.4 95 58.9
VMungo1215G1113 Vigna mungo HOM05D005987 ORTHO05D007233 7.1e-19 97.4 55 81.8
Sc12g0005210 Simmondsia chinensis HOM05D005987 ORTHO05D007233 1.2e-18 96.7 87 59.8
THA.LOC104821480 Tarenaya hassleriana HOM05D005987 ORTHO05D007233 1.2e-18 96.7 69 62.3
AUR62008180 Chenopodium quinoa HOM05D005987 ORTHO05D007233 1.6e-18 96.3 89 56.2
Glyma.17G087400 Glycine max HOM05D005987 ORTHO05D007233 1.6e-18 96.3 55 80.0
Sed0002182 Sechium edule HOM05D005987 ORTHO05D007233 2.1e-18 95.9 84 57.1
Phvul.003G202500 Phaseolus vulgaris HOM05D002782 ORTHO05D007233 2.7e-18 95.5 69 72.5
Oeu024705.1 Olea europaea HOM05D005987 ORTHO05D007233 3.5e-18 95.1 93 50.5
MD14G1176400 Malus domestica HOM05D005987 ORTHO05D007233 4.6e-18 94.7 75 68.0
Aa31LG11G610 Aethionema arabicum HOM05D005987 ORTHO05D007233 6.0e-18 94.4 70 68.6
EL10Ac5g10704 Beta vulgaris HOM05D005987 ORTHO05D007233 6.0e-18 94.4 88 56.8
Migut.D01982 Erythranthe guttata HOM05D005987 ORTHO05D007233 6.0e-18 94.4 90 51.1
CiPaw.12G028700 Carya illinoinensis HOM05D005987 ORTHO05D007233 7.8e-18 94.0 52 84.6
Haze_07547 Corylus avellana HOM05D005987 ORTHO05D007233 1.0e-17 93.6 123 49.6
Glyma.05G039500 Glycine max HOM05D005987 ORTHO05D007233 1.7e-17 92.8 57 80.7
Lj5A126G85 Lonicera japonica HOM05D005987 ORTHO05D007233 1.7e-17 92.8 51 82.4
HPP92_000317 Vanilla planifolia HOM05D005987 ORTHO05D007233 1.7e-17 92.8 52 82.7
CSS0034112 Camellia sinensis var. sinensis HOM05D005987 ORTHO05D007233 2.3e-17 92.4 99 54.5
AUR62028761 Chenopodium quinoa HOM05D005987 ORTHO05D007233 2.3e-17 92.4 78 60.3
Cc04_g12360 Coffea canephora HOM05D005987 ORTHO05D007233 2.3e-17 92.4 65 70.8
Peaxi162Scf00089g01737 Petunia axillaris HOM05D005987 ORTHO05D007233 3.9e-17 91.7 92 56.5
Eucgr.B00245 Eucalyptus grandis HOM05D005987 ORTHO05D007233 5.1e-17 91.3 99 53.5
PGR083G1581 Punica granatum HOM05D005987 ORTHO05D007233 6.6e-17 90.9 97 51.5
Hund09453 Selenicereus undatus HOM05D005987 ORTHO05D007233 8.7e-17 90.5 107 50.5
SalBow5G4110 Salvia bowleyana HOM05D005987 ORTHO05D007233 1.1e-16 90.1 67 65.7
Actinidia19114 Actinidia chinensis HOM05D005987 ORTHO05D007233 1.5e-16 89.7 95 52.6
Nitab4.5_0001207g0020 Nicotiana tabacum HOM05D001815 ORTHO05D007233 3.3e-16 88.6 87 51.7
FvH4_1g22320 Fragaria vesca HOM05D005987 ORTHO05D007233 4.3e-16 88.2 52 80.8
MSTRG.9684 Avicennia marina HOM05D005987 ORTHO05D007233 5.6e-16 87.8 82 54.9
Nn4g22674 Nelumbo nucifera HOM05D005987 ORTHO05D007233 5.6e-16 87.8 85 54.1
Os02g0321500 Oryza sativa ssp. japonica HOM05D005987 ORTHO05D007233 5.6e-16 87.8 89 52.8
Zm00001eb379250 Zea mays HOM05D005987 ORTHO05D007233 7.3e-16 87.4 100 51.0
FAN04G3269 Fragaria x ananassa HOM05D005987 ORTHO05D007233 1.2e-15 86.7 52 76.9
Nitab4.5_0003229g0030 Nicotiana tabacum HOM05D005987 ORTHO05D007233 1.2e-15 86.7 84 50.0
SEGI_07831 Sequoiadendron giganteum HOM05D005987 ORTHO05D007233 1.6e-15 86.3 59 64.4
SEGI_41325 Sequoiadendron giganteum HOM05D005987 ORTHO05D007233 1.6e-15 86.3 59 64.4
PGSC0003DMG400018166 Solanum tuberosum HOM05D005987 ORTHO05D007233 1.6e-15 86.3 89 53.9
PSO832G1443 Papaver somniferum HOM05D005987 ORTHO05D007233 2.1e-15 85.9 73 56.2
Solyc03g112640.3 Solanum lycopersicum HOM05D005987 ORTHO05D007233 2.1e-15 85.9 89 52.8
Sopen03g031720 Solanum pennellii HOM05D005987 ORTHO05D007233 2.1e-15 85.9 88 52.3
Ah.02g110630 Amaranthus hybridus HOM05D005987 ORTHO05D007233 2.8e-15 85.5 85 52.9
Rhsim12G0166400 Rhododendron simsii HOM05D005987 ORTHO05D007233 2.8e-15 85.5 84 52.4
AL8G40080 Arabidopsis lyrata HOM05D005987 ORTHO05D007233 1.1e-14 83.6 51 80.4
SalBow5G4086 Salvia bowleyana HOM05D005987 ORTHO05D007233 1.4e-14 83.2 51 76.5
vmacro16628 Vaccinium macrocarpon HOM05D005987 ORTHO05D007233 1.4e-14 83.2 97 53.6
Ah.11g051440 Amaranthus hybridus HOM05D005987 ORTHO05D007233 1.8e-14 82.8 85 51.8
CAN.G1166.26 Capsicum annuum HOM05D005987 ORTHO05D007233 1.8e-14 82.8 65 60.0
CDE06G0769 Ceratophyllum demersum HOM05D005987 ORTHO05D007233 3.1e-14 82.0 65 61.5
unitig_0.g1431 Utricularia gibba HOM05D005987 ORTHO05D007233 3.1e-14 82.0 82 53.7
ATR1152G043 Amborella trichopoda HOM05D005987 ORTHO05D007233 1.2e-13 80.1 70 60.0
AagrBONN_evm.TU.Sc2ySwM_117.1082 Anthoceros agrestis HOM05D005987 ORTHO05D007233 1.1e-11 73.6 55 60.0
Pp3c16_21460 Physcomitrium patens HOM05D005987 ORTHO05D007233 3.5e-10 68.6 72 47.2
Mapoly0098s0038 Marchantia polymorpha HOM05D005987 ORTHO05D007233 1.5e-08 63.2 54 55.6
SMO270G0062 Selaginella moellendorffii HOM05D005987 ORTHO05D007233 3.6e-07 58.5 52 50.0
Lj7C282T17 Lonicera japonica HOM05D005987 ORTHO05D007233 5.3e-06 54.7 32 68.8
CBR_g39624 Chara braunii HOM05D005987 ORTHO05D007233 6.9e-06 54.3 48 45.8


User provided reference genes

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