Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_29920 Corchorus olitorius HOM05D000876 ORTHO05D000285 3.2e-43 177.9 86 100.0
COL.COLO4_04748 Corchorus olitorius HOM05D000876 ORTHO05D000285 7.7e-29 130.2 67 95.5
Gorai.004G036300 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.4e-14 82.0 67 59.7
Gorai.008G032400 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.4e-14 82.0 67 59.7
COL.COLO4_34183 Corchorus olitorius HOM05D000534 ORTHO05D000389 5.4e-14 80.9 66 62.1
Gorai.013G094800 Gossypium raimondii HOM05D000876 ORTHO05D000285 8.3e-07 57.0 45 60.0
Gorai.004G173400 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.1e-06 56.6 42 61.9
Gorai.001G159400 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.4e-06 56.2 42 61.9
Gorai.006G056900 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.4e-06 56.2 42 61.9
Gorai.012G109800 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.4e-06 56.2 42 61.9
Atru.chr7.239 Acer truncatum HOM05D000034 ORTHO05D000037 2.4e-06 55.5 57 49.1
QL04p079613 Quercus lobata HOM05D000876 ORTHO05D000285 2.4e-06 55.5 62 48.4
QL05p031161 Quercus lobata HOM05D000034 ORTHO05D000037 3.1e-06 55.1 67 47.8
Gorai.N003000 Gossypium raimondii HOM05D000876 ORTHO05D000285 4.1e-06 54.7 42 59.5
Gorai.N004200 Gossypium raimondii HOM05D000876 ORTHO05D000285 4.1e-06 54.7 42 59.5
Prupe.5G020800 Prunus persica HOM05D000876 ORTHO05D000285 4.1e-06 54.7 63 46.0
Gorai.011G116300 Gossypium raimondii HOM05D000876 ORTHO05D000285 5.4e-06 54.3 49 53.1
Atru.chr3.1562 Acer truncatum HOM05D000876 ORTHO05D000285 7.0e-06 53.9 57 49.1
Atru.chr3.1584 Acer truncatum HOM05D000876 ORTHO05D000285 7.0e-06 53.9 57 49.1
Gorai.004G036600 Gossypium raimondii HOM05D000876 ORTHO05D000285 7.0e-06 53.9 42 59.5
QL08p029247 Quercus lobata HOM05D013302 ORTHO05D015047 7.0e-06 53.9 62 46.8
CANSAT25G2261 Cannabis sativa HOM05D000876 ORTHO05D000285 9.2e-06 53.5 42 54.8
Prupe.5G207000 Prunus persica HOM05D000876 ORTHO05D000285 9.2e-06 53.5 63 44.4
RcHm_v2.0_Chr4g0428601 Rosa chinensis HOM05D000876 ORTHO05D000285 9.2e-06 53.5 42 52.4


User provided reference genes

Program Settings