Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_29521 Corchorus olitorius HOM05D003887 ORTHO05D004523 9.8e-71 270.0 135 100.0
Duzib128G1521 Durio zibethinus HOM05D003887 ORTHO05D004523 2.4e-61 238.8 135 88.9
Thecc.05G108100 Theobroma cacao HOM05D003887 ORTHO05D004523 1.6e-60 236.1 135 88.1
Duzib106G1345 Durio zibethinus HOM05D003887 ORTHO05D004523 6.6e-59 230.7 135 87.4
Gorai.002G153400 Gossypium raimondii HOM05D003887 ORTHO05D004523 8.0e-57 223.8 130 86.2
Gohir.A01G135300 Gossypium hirsutum HOM05D003887 ORTHO05D004523 1.8e-56 222.6 130 85.4
Gohir.D04G154300 Gossypium hirsutum HOM05D003887 ORTHO05D004523 1.8e-56 222.6 133 85.0
Gorai.012G141600 Gossypium raimondii HOM05D003887 ORTHO05D004523 5.2e-56 221.1 133 84.2
Gohir.D01G122500 Gossypium hirsutum HOM05D003887 ORTHO05D004523 6.8e-56 220.7 130 85.4
Atru.chr8.1305 Acer truncatum HOM05D003887 ORTHO05D004523 1.2e-55 219.9 134 81.3
TAR265G0002 Trochodendron aralioides HOM05D003887 ORTHO05D004523 4.4e-55 218.0 135 81.5
TAR633G0863 Trochodendron aralioides HOM05D003887 ORTHO05D004523 5.8e-55 217.6 132 79.5
Gohir.A04G113000 Gossypium hirsutum HOM05D003887 ORTHO05D004523 1.3e-54 216.5 133 82.7
RcHm_v2.0_Chr3g0476591 Rosa chinensis HOM05D003887 ORTHO05D004523 1.3e-54 216.5 132 80.3
FAN05G1982 Fragaria x ananassa HOM05D003887 ORTHO05D004523 2.9e-54 215.3 132 80.3
Haze_20135 Corylus avellana HOM05D003887 ORTHO05D004523 3.7e-54 214.9 135 79.3
Potri.016G067200 Populus trichocarpa HOM05D003887 ORTHO05D004523 3.7e-54 214.9 134 79.1
Sopen10g030440 Solanum pennellii HOM05D003887 ORTHO05D004523 3.7e-54 214.9 129 81.4
PGSC0003DMG400029847 Solanum tuberosum HOM05D003887 ORTHO05D004523 3.7e-54 214.9 129 81.4
Solyc10g079830.3 Solanum lycopersicum HOM05D003887 ORTHO05D004523 8.3e-54 213.8 129 80.6
Prupe.7G091600 Prunus persica HOM05D003887 ORTHO05D004523 1.1e-53 213.4 132 79.5
CiPaw.09G022700 Carya illinoinensis HOM05D003887 ORTHO05D004523 1.9e-53 212.6 133 78.9
QL10p000363 Quercus lobata HOM05D003887 ORTHO05D004523 1.9e-53 212.6 133 79.7
GSVIVG01028462001 Vitis vinifera HOM05D003887 ORTHO05D004523 1.9e-53 212.6 131 80.9
Manes.08G035800 Manihot esculenta HOM05D003887 ORTHO05D004523 2.4e-53 212.2 126 82.5
MD12G1043200 Malus domestica HOM05D003887 ORTHO05D004523 3.2e-53 211.8 132 80.3
FvH4_6g20690 Fragaria vesca HOM05D003887 ORTHO05D004523 4.1e-53 211.5 132 79.5
FAN14G0913 Fragaria x ananassa HOM05D003887 ORTHO05D004523 4.1e-53 211.5 132 79.5
Lj3C240T1 Lonicera japonica HOM05D003887 ORTHO05D004523 4.1e-53 211.5 129 79.8
FAN09G3131 Fragaria x ananassa HOM05D003887 ORTHO05D004523 7.0e-53 210.7 132 78.8
QL02p078458 Quercus lobata HOM05D003887 ORTHO05D004523 7.0e-53 210.7 133 78.9
TWI18G1123 Tripterygium wilfordii HOM05D003887 ORTHO05D004523 7.0e-53 210.7 134 76.9
CAN.G1656.10 Capsicum annuum HOM05D003887 ORTHO05D004523 9.2e-53 210.3 129 79.1
Ciclev10013089m.g Citrus clementina HOM05D003887 ORTHO05D004523 9.2e-53 210.3 133 75.9
MBI07_g23221_MAGBIO Magnolia biondii HOM05D003887 ORTHO05D004523 9.2e-53 210.3 129 79.1
MD14G1042300 Malus domestica HOM05D003887 ORTHO05D004523 1.2e-52 209.9 132 79.5
Cc06_g06820 Coffea canephora HOM05D003887 ORTHO05D004523 2.0e-52 209.1 124 82.3
Lj9C712T7 Lonicera japonica HOM05D003887 ORTHO05D004523 2.0e-52 209.1 133 75.9
FAN02G3629 Fragaria x ananassa HOM05D003887 ORTHO05D004523 1.0e-51 206.8 132 77.3
Nn1g06263 Nelumbo nucifera HOM05D003887 ORTHO05D004523 1.0e-51 206.8 131 77.1
CANSAT64G2672 Cannabis sativa HOM05D003887 ORTHO05D004523 2.3e-51 205.7 126 80.2
CAN.G1237.27 Capsicum annuum HOM05D003887 ORTHO05D004523 3.0e-51 205.3 130 76.2
Cpa.g.sc104.4 Carica papaya HOM05D003887 ORTHO05D004523 3.9e-51 204.9 130 80.0
Cc06_g20890 Coffea canephora HOM05D003887 ORTHO05D004523 3.9e-51 204.9 123 80.5
Hma1.2p1_0969F.1_g242620 Hydrangea macrophylla HOM05D003887 ORTHO05D004523 6.6e-51 204.1 122 78.7
FAN05G1871 Fragaria x ananassa HOM05D003887 ORTHO05D004523 8.6e-51 203.8 125 80.0
Aqoxy1G00605 Aquilegia oxysepala HOM05D003887 ORTHO05D004523 1.5e-50 203.0 130 77.7
CSS0042801 Camellia sinensis var. sinensis HOM05D003887 ORTHO05D004523 1.5e-50 203.0 126 79.4
Aqoxy2G02430 Aquilegia oxysepala HOM05D003887 ORTHO05D004523 3.3e-50 201.8 130 78.5
ECA233G2913 Erigeron canadensis HOM05D003887 ORTHO05D004523 4.3e-50 201.4 132 75.8
Nn5g28552 Nelumbo nucifera HOM05D003887 ORTHO05D004523 5.6e-50 201.1 128 77.3
Nitab4.5_0008674g0010 Nicotiana tabacum HOM05D003887 ORTHO05D004523 9.5e-50 200.3 125 76.8
Hund18807 Selenicereus undatus HOM05D003887 ORTHO05D004523 9.5e-50 200.3 130 76.9
QL07p027116 Quercus lobata HOM05D003887 ORTHO05D004523 1.2e-49 199.9 133 73.7
Sabra16G0068500 Salix brachista HOM05D003887 ORTHO05D004523 3.6e-49 198.4 126 77.8
Migut.L01853 Erythranthe guttata HOM05D003887 ORTHO05D004523 4.7e-49 198.0 129 76.7
PGR142G0321 Punica granatum HOM05D003887 ORTHO05D004523 1.1e-48 196.8 122 77.9
AUR62020206 Chenopodium quinoa HOM05D003887 ORTHO05D004523 4.0e-48 194.9 130 75.4
Eucgr.G00614 Eucalyptus grandis HOM05D003887 ORTHO05D004523 4.0e-48 194.9 120 81.7
vmacro07505 Vaccinium macrocarpon HOM05D003887 ORTHO05D004523 4.0e-48 194.9 119 79.8
DCAR_020685 Daucus carota HOM05D003887 ORTHO05D004523 5.2e-48 194.5 130 72.3
Sc06g0008630 Simmondsia chinensis HOM05D003887 ORTHO05D004523 6.8e-48 194.1 127 76.4
Sc06g0010620 Simmondsia chinensis HOM05D003887 ORTHO05D004523 8.9e-48 193.7 134 73.1
Ah.08g222240 Amaranthus hybridus HOM05D003887 ORTHO05D004523 2.6e-47 192.2 130 74.6
MSTRG.26582 Avicennia marina HOM05D003887 ORTHO05D004523 4.4e-47 191.4 129 72.1
Lsat_1_v5_gn_6_34741 Lactuca sativa HOM05D003887 ORTHO05D004523 7.5e-47 190.7 124 73.4
Peaxi162Scf00130g01133 Petunia axillaris HOM05D003887 ORTHO05D004523 7.5e-47 190.7 122 73.8
MSTRG.10420 Avicennia marina HOM05D003887 ORTHO05D004523 2.2e-46 189.1 122 74.6
Os08g0556200 Oryza sativa ssp. japonica HOM05D003887 ORTHO05D004523 1.4e-45 186.4 119 79.0
Rhsim03G0059700 Rhododendron simsii HOM05D003887 ORTHO05D004523 2.4e-45 185.7 139 67.6
SHI28303 Sapria himalayana HOM05D003887 ORTHO05D004523 2.4e-45 185.7 122 73.8
VMungo1215G2564 Vigna mungo HOM05D003887 ORTHO05D004523 2.4e-45 185.7 128 72.7
EL10Ac7g16270 Beta vulgaris HOM05D003887 ORTHO05D004523 4.1e-45 184.9 122 75.4
Glyma.07G068300 Glycine max HOM05D003887 ORTHO05D004523 5.4e-45 184.5 120 75.8
HanXRQChr13g0398651 Helianthus annuus HOM05D003887 ORTHO05D004523 7.1e-45 184.1 114 78.9
Phvul.001G197300 Phaseolus vulgaris HOM05D003887 ORTHO05D004523 7.1e-45 184.1 128 71.1
Lj1g0007196 Lotus japonicus HOM05D003887 ORTHO05D004523 9.2e-45 183.7 135 68.1
Os09g0560500 Oryza sativa ssp. japonica HOM05D003887 ORTHO05D004523 9.2e-45 183.7 118 77.1
VMungo1383G2471 Vigna mungo HOM05D003887 ORTHO05D004523 1.2e-44 183.3 128 70.3
Glyma.03G203800 Glycine max HOM05D003887 ORTHO05D004523 2.7e-44 182.2 120 73.3
Gohir.A04G112940 Gossypium hirsutum HOM05D003887 ORTHO05D004523 4.6e-44 181.4 112 82.1
PSO339G2059 Papaver somniferum HOM05D003887 ORTHO05D004523 4.6e-44 181.4 123 69.9
PSO210G2693 Papaver somniferum HOM05D003887 ORTHO05D004523 1.0e-43 180.3 132 66.7
Lalb_Chr20g0111271 Lupinus albus HOM05D003887 ORTHO05D004523 1.3e-43 179.9 120 74.2
CDE02G3355 Ceratophyllum demersum HOM05D003887 ORTHO05D004523 3.0e-43 178.7 130 69.2
SGA_v2.0_scaffold392G50674 Striga asiatica HOM05D003887 ORTHO05D004523 5.1e-43 177.9 124 71.0
PSO513G0097 Papaver somniferum HOM05D003887 ORTHO05D004523 6.6e-43 177.6 132 64.4
Phvul.001G204200 Phaseolus vulgaris HOM05D003887 ORTHO05D004523 8.6e-43 177.2 128 68.8
AUR62042906 Chenopodium quinoa HOM05D003887 ORTHO05D004523 1.1e-42 176.8 117 76.9
Oeu020172.1 Olea europaea HOM05D003887 ORTHO05D004523 1.5e-42 176.4 126 68.3
Zm00001eb039720 Zea mays HOM05D003887 ORTHO05D004523 3.3e-42 175.3 119 73.9
Ca_09068_v3 Cicer arietinum L. HOM05D003887 ORTHO05D004523 4.3e-42 174.9 120 72.5
ClCG04G001280 Citrullus lanatus HOM05D003887 ORTHO05D004523 7.3e-42 174.1 124 69.4
PSO782G0206 Papaver somniferum HOM05D003887 ORTHO05D004523 7.3e-42 174.1 124 65.3
Medtr7g106580 Medicago truncatula HOM05D003887 ORTHO05D004523 9.5e-42 173.7 120 70.8
Zm00001eb039830 Zea mays HOM05D003887 ORTHO05D004523 1.2e-41 173.3 118 73.7
HanXRQChr01g0028311 Helianthus annuus HOM05D003887 ORTHO05D004523 1.6e-41 172.9 114 76.3
Sed0005545 Sechium edule HOM05D003887 ORTHO05D004523 1.6e-41 172.9 124 68.5
PSO513G0196 Papaver somniferum HOM05D003887 ORTHO05D004523 2.8e-41 172.2 126 64.3
arahy.Tifrunner.gnm1.ann1.Z0QHZD Arachis hypogaea HOM05D003887 ORTHO05D004523 3.6e-41 171.8 120 70.8
Psat3g027720 Pisum sativum HOM05D001091 ORTHO05D004523 3.6e-41 171.8 123 68.3
PSO339G1162 Papaver somniferum HOM05D003887 ORTHO05D004523 4.7e-41 171.4 130 62.3
Psat5g004600 Pisum sativum HOM05D003887 ORTHO05D004523 6.2e-41 171.0 119 68.9
unitig_899.g14853 Utricularia gibba HOM05D003887 ORTHO05D004523 1.1e-40 170.2 123 65.9
CsaV3_4G004540 Cucumis sativus L. HOM05D003887 ORTHO05D004523 1.4e-40 169.9 124 66.9
Glyma.16G034300 Glycine max HOM05D003887 ORTHO05D004523 1.8e-40 169.5 120 72.5
ATR0730G208 Amborella trichopoda HOM05D003887 ORTHO05D004523 3.1e-40 168.7 127 64.6
Os06g0154600 Oryza sativa ssp. japonica HOM05D003887 ORTHO05D004523 3.1e-40 168.7 118 70.3
Actinidia03974 Actinidia chinensis HOM05D003887 ORTHO05D004523 6.8e-40 167.5 127 66.1
Nitab4.5_0000677g0080 Nicotiana tabacum HOM05D003887 ORTHO05D004523 6.8e-40 167.5 109 77.1
MELO3C019050.2 Cucumis melo HOM05D003887 ORTHO05D004523 8.9e-40 167.2 122 67.2
Medtr2g088720 Medicago truncatula HOM05D003887 ORTHO05D004523 1.5e-39 166.4 120 67.5
TPR.G25788 Trifolium pratense HOM05D003887 ORTHO05D004523 1.5e-39 166.4 119 68.1
Actinidia03866 Actinidia chinensis HOM05D003887 ORTHO05D004523 2.0e-39 166.0 127 66.1
ATR0730G166 Amborella trichopoda HOM05D003887 ORTHO05D004523 2.6e-39 165.6 127 65.4
Medtr7g106600 Medicago truncatula HOM05D003887 ORTHO05D004523 2.6e-39 165.6 120 68.3
Lj6g0023596 Lotus japonicus HOM05D003887 ORTHO05D004523 2.2e-38 162.5 123 66.7
SEGI_09372 Sequoiadendron giganteum HOM05D003887 ORTHO05D004523 2.2e-38 162.5 121 66.1
AL3G23320 Arabidopsis lyrata HOM05D003887 ORTHO05D004523 8.4e-38 160.6 128 60.9
AagrBONN_evm.TU.Sc2ySwM_117.2540 Anthoceros agrestis HOM05D003887 ORTHO05D004523 1.1e-37 160.2 121 62.8
SEGI_12007 Sequoiadendron giganteum HOM05D003887 ORTHO05D004523 1.4e-37 159.8 125 63.2
SalBow7G3037 Salvia bowleyana HOM05D003887 ORTHO05D004523 9.2e-37 157.1 126 64.3
THA.LOC104826798 Tarenaya hassleriana HOM05D003887 ORTHO05D004523 1.6e-36 156.4 126 61.9
BcaC09g48199 Brassica carinata HOM05D003887 ORTHO05D004523 2.1e-36 156.0 124 62.9
BolC1t05293H Brassica oleracea HOM05D003887 ORTHO05D004523 2.1e-36 156.0 124 62.9
BraA01t04162Z Brassica rapa HOM05D003887 ORTHO05D004523 2.1e-36 156.0 124 62.9
AT3G11750 Arabidopsis thaliana HOM05D003887 ORTHO05D004523 3.5e-36 155.2 128 59.4
AL8G40010 Arabidopsis lyrata HOM05D003887 ORTHO05D004523 4.6e-36 154.8 124 62.9
BcaB04g21119 Brassica carinata HOM05D003887 ORTHO05D004523 4.6e-36 154.8 126 61.9
CDE09G0948 Ceratophyllum demersum HOM05D003887 ORTHO05D004523 6.0e-36 154.5 112 68.8
Aa31LG3G5230 Aethionema arabicum HOM05D003887 ORTHO05D004523 1.7e-35 152.9 121 64.5
AT5G62980 Arabidopsis thaliana HOM05D003887 ORTHO05D004523 1.7e-35 152.9 132 61.4
BcaB02g09713 Brassica carinata HOM05D003887 ORTHO05D004523 1.7e-35 152.9 122 63.9
Thhalv10021697m.g Eutrema salsugineum HOM05D003887 ORTHO05D004523 1.7e-35 152.9 128 60.9
Thhalv10005125m.g Eutrema salsugineum HOM05D003887 ORTHO05D004523 2.3e-35 152.5 122 61.5
Carub.0003s1109 Capsella rubella HOM05D003887 ORTHO05D004523 6.6e-35 151.0 121 61.2
SMO351G0485 Selaginella moellendorffii HOM05D003887 ORTHO05D004523 8.6e-35 150.6 119 63.0
Aa31LG3G5210 Aethionema arabicum HOM05D003887 ORTHO05D004523 1.1e-34 150.2 122 62.3
Lj6g0002536 Lotus japonicus HOM05D003887 ORTHO05D004523 1.1e-34 150.2 119 59.7
Carub.0008s2369 Capsella rubella HOM05D003887 ORTHO05D004523 1.5e-34 149.8 124 60.5
Sp3g09980 Schrenkiella parvula HOM05D003887 ORTHO05D004523 2.5e-34 149.1 119 60.5
Lj6g0002343 Lotus japonicus HOM05D003887 ORTHO05D004523 7.3e-34 147.5 123 59.3
BcaB06g25586 Brassica carinata HOM05D003887 ORTHO05D004523 9.6e-34 147.1 124 58.9
DCAR_009071 Daucus carota HOM05D003887 ORTHO05D004523 9.6e-34 147.1 135 58.5
CARHR276790 Cardamine hirsuta HOM05D003887 ORTHO05D004523 1.6e-33 146.4 119 62.2
ECA232G3477 Erigeron canadensis HOM05D003887 ORTHO05D004523 2.1e-33 146.0 107 69.2
Glyma.19G201200 Glycine max HOM05D003887 ORTHO05D004523 2.1e-33 146.0 129 62.0
BcaC05g29334 Brassica carinata HOM05D003887 ORTHO05D004523 1.4e-32 143.3 118 59.3
C05p56150 Brassica napus HOM05D003887 ORTHO05D004523 1.4e-32 143.3 118 59.3
BraA05t22556Z Brassica rapa HOM05D003887 ORTHO05D004523 1.8e-32 142.9 118 60.2
A05p37580 Brassica napus HOM05D003887 ORTHO05D004523 8.9e-32 140.6 118 59.3
A05p37590 Brassica napus HOM05D003887 ORTHO05D004523 2.6e-31 139.0 124 57.3
BraA05t22557Z Brassica rapa HOM05D003887 ORTHO05D004523 2.6e-31 139.0 124 57.3
arahy.Tifrunner.gnm1.ann1.K0K91E Arachis hypogaea HOM05D003887 ORTHO05D004523 3.4e-31 138.7 120 60.0
Pp3c1_42850 Physcomitrium patens HOM05D003887 ORTHO05D004523 4.4e-31 138.3 116 59.5
AL3G35860 Arabidopsis lyrata HOM05D003887 ORTHO05D004523 1.6e-28 129.8 119 54.6
Mapoly0109s0052 Marchantia polymorpha HOM05D003887 ORTHO05D004523 6.0e-28 127.9 119 56.3
HPP92_016697 Vanilla planifolia HOM05D003887 ORTHO05D004523 1.3e-25 120.2 103 63.1
Actinidia06188 Actinidia chinensis HOM05D003887 ORTHO05D004523 2.6e-23 112.5 58 87.9
PGSC0003DMG400007623 Solanum tuberosum HOM05D003887 ORTHO05D004523 1.4e-21 106.7 67 73.1
CSS0033244 Camellia sinensis var. sinensis HOM05D003887 ORTHO05D004523 7.9e-20 100.9 64 78.1
Rhsim03G0060000 Rhododendron simsii HOM05D003887 ORTHO05D004523 9.6e-18 94.0 64 71.9
Rhsim03G0060200 Rhododendron simsii HOM05D003887 ORTHO05D004523 9.6e-18 94.0 64 71.9
Nitab4.5_0000936g0150 Nicotiana tabacum HOM05D003887 ORTHO05D004523 2.1e-17 92.8 82 65.9
arahy.Tifrunner.gnm1.ann1.T8NVRB Arachis hypogaea HOM05D003887 ORTHO05D004523 3.6e-17 92.0 79 65.8
Zm00001eb027530 Zea mays HOM05D011105 ORTHO05D007705 3.6e-17 92.0 55 76.4
arahy.Tifrunner.gnm1.ann1.97GEQU Arachis hypogaea HOM05D003887 ORTHO05D004523 4.8e-17 91.7 65 75.4
arahy.Tifrunner.gnm1.ann1.3PGZ0K Arachis hypogaea HOM05D003887 ORTHO05D004523 1.4e-16 90.1 62 75.8
Gohir.D09G062150 Gossypium hirsutum HOM05D003887 ORTHO05D004523 1.8e-16 89.7 54 79.6
Gorai.006G076900 Gossypium raimondii HOM05D003887 ORTHO05D004523 1.8e-16 89.7 65 70.8
Cre02.g097450 Chlamydomonas reinhardtii HOM05D003887 ORTHO05D004523 6.9e-16 87.8 112 41.1
Mapoly0121s0041 Marchantia polymorpha HOM05D003887 ORTHO05D004523 5.8e-15 84.7 91 48.4
Actinidia37764 Actinidia chinensis HOM05D001091 ORTHO05D001020 2.4e-13 79.3 58 74.1
Mapoly0003s0213 Marchantia polymorpha HOM05D003887 ORTHO05D004523 9.3e-13 77.4 118 40.7
Lj3A241T19 Lonicera japonica HOM05D003887 ORTHO05D004523 1.6e-12 76.6 59 64.4
Aa31LG3G5240 Aethionema arabicum HOM05D003887 ORTHO05D004523 1.0e-11 73.9 66 62.1
HanXRQChr02g0053341 Helianthus annuus HOM05D003887 ORTHO05D048295 2.0e-07 59.7 35 74.3
Nitab4.5_0006280g0090 Nicotiana tabacum HOM05D003887 ORTHO05D048295 2.6e-07 59.3 38 68.4
AT3G21730 Arabidopsis thaliana HOM05D003887 ORTHO05D004523 2.2e-06 56.2 64 45.3


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