Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 8.9e-131 470.3 243 100.0
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 1.8e-99 366.3 246 80.1
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 8.4e-97 357.5 246 76.8
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.9e-94 348.6 246 76.0
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.9e-93 346.3 246 76.4
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 5.5e-72 275.0 259 59.8
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 1.6e-68 263.5 267 57.7
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 2.7e-63 246.1 259 53.3
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 5.1e-62 241.9 245 53.5
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 1.7e-60 236.9 260 56.9
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 5.3e-59 231.9 245 53.5
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 1.5e-58 230.3 263 52.9
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 2.6e-58 229.6 248 54.0
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 3.4e-58 229.2 140 82.1
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 4.5e-58 228.8 267 51.3
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 7.7e-58 228.0 260 55.4
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 2.2e-57 226.5 271 52.4
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 4.2e-56 222.2 245 52.7
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 9.4e-56 221.1 248 53.2
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 9.4e-56 221.1 311 46.0
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 1.8e-54 216.9 284 47.5
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 2.3e-54 216.5 253 51.8
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 3.9e-54 215.7 243 52.3
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 6.7e-54 214.9 240 52.1
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 6.7e-54 214.9 260 48.8
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 1.1e-53 214.2 251 54.2
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 2.6e-53 213.0 256 50.0
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 1.7e-52 210.3 254 49.2
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 2.8e-52 209.5 254 47.6
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 2.8e-52 209.5 256 48.8
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 3.7e-52 209.1 256 50.0
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 4.8e-52 208.8 245 53.5
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 8.2e-52 208.0 260 48.1
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 1.4e-51 207.2 262 48.1
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 1.8e-51 206.8 262 47.7
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 1.8e-51 206.8 253 49.8
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 3.1e-51 206.1 255 47.5
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 4.1e-51 205.7 254 48.0
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 3.5e-50 202.6 254 47.6
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 3.8e-49 199.1 243 46.1
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 5.0e-49 198.7 261 47.1
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 8.5e-49 198.0 253 47.0
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 1.9e-48 196.8 264 47.3
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 3.2e-48 196.1 249 45.0
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 3.2e-48 196.1 252 46.0
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 3.2e-48 196.1 253 47.0
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 4.2e-48 195.7 249 45.4
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 5.5e-48 195.3 257 47.9
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 5.5e-48 195.3 266 45.5
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 1.2e-47 194.1 257 47.5
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 6.1e-47 191.8 249 44.6
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 6.1e-47 191.8 275 44.7
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 1.0e-46 191.0 243 47.3
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 1.0e-46 191.0 246 47.6
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 1.4e-46 190.7 249 44.2
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 3.3e-45 186.0 244 45.1
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 1.7e-44 183.7 246 45.5
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 2.2e-44 183.3 246 45.5
Gohir.A06G128402 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.1e-43 179.5 158 62.7
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 7.0e-43 178.3 222 47.7
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 7.0e-43 178.3 271 43.9
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 1.6e-42 177.2 321 39.3
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 8.5e-41 171.4 248 43.1
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 9.4e-40 167.9 253 43.9
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 4.7e-39 165.6 243 42.8
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 6.1e-39 165.2 243 42.8
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 8.0e-39 164.9 212 49.1
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 1.4e-38 164.1 188 51.6
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 2.3e-38 163.3 245 44.5
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 4.0e-38 162.5 251 42.2
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 9.7e-37 157.9 268 39.9
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 1.8e-35 153.7 250 42.8
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 3.1e-35 152.9 249 42.6
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 7.0e-35 151.8 170 47.1
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 2.0e-34 150.2 259 39.4
Gohir.A07G056200 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.7e-34 149.8 122 68.0
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 1.0e-33 147.9 252 40.5
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 2.7e-31 139.8 245 41.6
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 4.0e-30 136.0 292 33.9
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 1.2e-29 134.4 241 40.2
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 7.5e-29 131.7 179 43.0
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 2.4e-27 126.7 194 45.4
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 7.0e-27 125.2 247 39.3
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 7.0e-27 125.2 247 40.1
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 9.1e-27 124.8 252 37.3
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 4.5e-26 122.5 100 68.0
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 5.9e-26 122.1 216 38.4
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 1.5e-24 117.5 303 31.4
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 2.8e-23 113.2 169 43.2
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 5.2e-22 109.0 213 36.2
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 8.9e-22 108.2 220 37.7
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 7.5e-21 105.1 151 42.4
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 8.3e-20 101.7 101 53.5
Eucgr.A02531 Eucalyptus grandis HOM05D007071 ORTHO05D008677 2.4e-19 100.1 75 73.3
MD12G1047800 Malus domestica HOM05D007071 ORTHO05D008677 2.9e-17 93.2 85 60.0
TPR.G40805 Trifolium pratense HOM05D007071 ORTHO05D008677 2.5e-16 90.1 65 69.2
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 2.3e-14 83.6 118 44.1
CSS0001330 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 2.9e-12 76.6 65 60.0
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.7e-10 70.1 40 77.5
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 6.0e-10 68.9 289 25.6
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 7.8e-10 68.6 42 71.4
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 8.6e-09 65.1 195 31.3
QL02p030777 Quercus lobata HOM05D007071 ORTHO05D008677 1.1e-08 64.7 47 63.8
PGSC0003DMG400019076 Solanum tuberosum HOM05D007071 ORTHO05D008677 1.8e-06 57.4 57 50.9


User provided reference genes

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