Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_29430 Corchorus olitorius HOM05D035412 ORTHO05D019051 5.7e-236 820.5 396 100.0
COL.COLO4_29429 Corchorus olitorius HOM05D035412 ORTHO05D019051 5.7e-143 511.5 407 69.3
PGR044G2517 Punica granatum HOM05D023452 ORTHO05D019051 7.9e-28 129.0 357 27.7
Rhsim04G0227100 Rhododendron simsii HOM05D015811 ORTHO05D014676 2.7e-20 104.0 300 27.7
Rhsim02G0162400 Rhododendron simsii HOM05D015811 ORTHO05D014676 3.6e-20 103.6 293 28.0
Rhsim04G0226100 Rhododendron simsii HOM05D015811 ORTHO05D014676 6.1e-20 102.8 333 26.1
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 2.0e-18 97.8 181 33.1
Thecc.03G315600 Theobroma cacao HOM05D035412 ORTHO05D019051 1.1e-16 92.0 126 45.2
PGR031G0854 Punica granatum HOM05D023452 ORTHO05D019051 1.4e-16 91.7 176 33.5
Rhsim04G0226600 Rhododendron simsii HOM05D015811 ORTHO05D014676 1.8e-16 91.3 348 26.4
Rhsim02G0162000 Rhododendron simsii HOM05D015811 ORTHO05D014676 2.4e-16 90.9 344 23.5
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.1e-16 90.1 372 23.9
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.1e-16 90.1 372 23.9
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.3e-16 89.7 412 22.6
PGR031G1460 Punica granatum HOM05D023452 ORTHO05D019051 2.6e-15 87.4 134 35.8
RhsimUnG0050900 Rhododendron simsii HOM05D015811 ORTHO05D014676 2.6e-15 87.4 229 29.7
PGR031G1231 Punica granatum HOM05D023452 ORTHO05D019051 3.4e-15 87.0 137 35.8
Rhsim02G0161800 Rhododendron simsii HOM05D015811 ORTHO05D014676 4.5e-15 86.7 345 24.9
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-14 84.7 384 23.4
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-14 84.7 384 23.4
PGR031G3116 Punica granatum HOM05D023452 ORTHO05D019051 2.2e-14 84.3 127 37.8
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-13 80.5 339 23.9
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-13 80.5 235 27.7
Rhsim04G0226700 Rhododendron simsii HOM05D015811 ORTHO05D014676 5.5e-13 79.7 317 23.7
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 2.7e-12 77.4 240 24.6
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-11 74.3 234 26.9
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 3.0e-11 73.9 234 27.4
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.8e-11 72.4 234 26.9
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-10 71.6 240 25.8
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 2.0e-10 71.2 238 24.8
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.6e-10 70.9 267 25.1
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.6e-10 70.9 234 26.9
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-09 68.2 279 24.0
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 2.8e-09 67.4 279 24.0
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 6.3e-09 66.2 240 25.0
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 6.3e-09 66.2 240 25.0
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.3e-09 66.2 279 23.3
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-08 65.5 281 24.2
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.1e-08 65.5 277 24.5
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.3e-08 63.2 199 27.6
Cfa007631 Carpinus fangiana HOM05D008391 ORTHO05D009743 7.0e-08 62.8 168 32.1
Cfa003300 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.2e-07 62.0 132 34.1
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 1.2e-07 62.0 200 26.5
vmacro10955 Vaccinium macrocarpon HOM05D011274 ORTHO05D012136 2.6e-07 60.8 194 29.4
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 3.5e-07 60.5 192 26.0
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-06 58.5 176 26.7


User provided reference genes

Program Settings