Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 1.6e-158 562.8 288 100.0
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 7.3e-132 474.2 295 82.7
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 6.8e-130 467.6 290 83.4
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 2.7e-126 455.7 293 81.2
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 2.7e-126 455.7 293 81.2
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 1.0e-125 453.8 293 81.2
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 8.9e-114 414.1 275 74.9
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 6.0e-110 401.4 267 74.5
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 3.9e-109 398.7 271 72.3
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 2.5e-108 396.0 284 68.7
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 3.3e-108 395.6 271 72.0
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 3.3e-108 395.6 279 73.1
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 9.6e-108 394.0 276 69.9
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 1.6e-107 393.3 289 69.2
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 3.6e-107 392.1 295 70.5
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 3.6e-107 392.1 277 69.7
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 4.8e-107 391.7 277 70.0
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 4.8e-107 391.7 277 69.7
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 5.3e-106 388.3 281 67.3
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 1.2e-105 387.1 276 70.7
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 4.4e-105 385.2 279 67.7
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 7.6e-105 384.4 268 72.4
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 3.8e-104 382.1 282 71.3
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 8.4e-104 380.9 296 68.2
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 8.4e-104 380.9 267 71.9
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 1.4e-103 380.2 296 68.2
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.4e-103 380.2 285 67.0
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 1.9e-103 379.8 267 70.4
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 1.9e-103 379.8 261 71.6
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 2.4e-103 379.4 268 69.8
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 4.2e-103 378.6 282 69.1
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 9.3e-103 377.5 282 68.1
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 4.6e-102 375.2 300 63.7
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 7.9e-102 374.4 282 68.1
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 8.7e-101 370.9 281 66.5
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 3.3e-100 369.0 269 71.7
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 7.4e-100 367.9 262 69.8
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 1.3e-99 367.1 267 70.4
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 4.8e-99 365.2 233 77.7
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 8.1e-99 364.4 269 68.4
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 2.4e-98 362.8 270 67.8
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 5.3e-98 361.7 286 66.4
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 6.9e-98 361.3 283 65.4
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 2.6e-97 359.4 280 64.3
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 2.6e-97 359.4 288 66.7
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 2.6e-97 359.4 231 75.8
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 3.4e-97 359.0 283 64.7
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 5.8e-97 358.2 272 66.9
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 5.8e-97 358.2 272 66.9
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 5.8e-97 358.2 229 77.3
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 5.8e-97 358.2 280 65.7
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 5.8e-97 358.2 288 66.7
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 9.9e-97 357.5 273 66.3
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 9.9e-97 357.5 274 66.4
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 1.7e-96 356.7 273 66.3
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 1.7e-96 356.7 274 66.1
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 1.7e-96 356.7 237 73.4
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 1.7e-96 356.7 246 71.1
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 2.9e-96 355.9 283 65.7
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 3.8e-96 355.5 273 67.0
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 3.8e-96 355.5 273 67.0
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 3.8e-96 355.5 273 67.0
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 4.9e-96 355.1 267 68.9
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 6.4e-96 354.8 235 71.9
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 1.1e-95 354.0 273 65.6
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 1.4e-95 353.6 237 73.0
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 1.9e-95 353.2 257 68.9
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 2.4e-95 352.8 283 63.3
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 2.4e-95 352.8 259 67.6
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 3.2e-95 352.4 274 66.1
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 5.5e-95 351.7 247 72.5
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 9.3e-95 350.9 238 70.6
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 2.1e-94 349.7 286 65.0
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 2.1e-94 349.7 281 62.6
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 3.5e-94 349.0 270 66.3
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 4.6e-94 348.6 270 66.7
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 6.0e-94 348.2 262 67.2
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 7.9e-94 347.8 286 63.6
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 1.8e-93 346.7 269 65.8
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 2.3e-93 346.3 276 63.4
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 3.0e-93 345.9 269 66.2
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 3.9e-93 345.5 276 63.8
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 5.1e-93 345.1 249 69.9
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 9.6e-92 340.9 275 63.3
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 3.7e-91 339.0 273 64.1
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 3.7e-91 339.0 282 61.3
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 6.2e-91 338.2 223 73.1
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 8.1e-91 337.8 229 72.1
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 8.1e-91 337.8 229 72.1
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 2.4e-90 336.3 277 63.9
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 2.6e-89 332.8 229 70.7
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 1.4e-87 327.0 320 54.1
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 9.6e-84 314.3 286 58.0
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 2.1e-83 313.2 222 67.1
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 3.1e-82 309.3 259 60.2
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 2.0e-81 306.6 230 65.2
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 5.9e-81 305.1 251 63.7
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 6.3e-75 285.0 223 65.5
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 2.2e-72 276.6 241 61.0
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 3.2e-71 272.7 178 73.6
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 2.4e-66 256.5 172 75.6
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 5.3e-66 255.4 268 51.5
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 4.2e-63 245.7 262 51.5
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 2.2e-51 206.8 136 73.5
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 1.8e-50 203.8 169 62.1
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 2.7e-49 199.9 209 47.8
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 8.5e-48 194.9 189 55.6
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 1.6e-46 190.7 204 52.0
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 1.0e-45 188.0 193 47.7
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 1.5e-44 184.1 216 45.4
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 2.2e-43 180.3 196 48.0
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 2.7e-41 173.3 144 60.4
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 7.5e-36 155.2 192 40.6
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 2.8e-35 153.3 87 82.8
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 1.4e-34 151.0 130 60.8
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 5.7e-28 129.0 91 70.3
MD09G1034600 Malus domestica HOM05D006484 ORTHO05D000001 4.1e-26 122.9 91 65.9
Atru.chr6.2294 Acer truncatum HOM05D006484 ORTHO05D008002 3.5e-25 119.8 89 64.0
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 1.9e-23 114.0 131 48.9
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 2.0e-17 94.0 59 74.6
Cre03.g183400 Chlamydomonas reinhardtii HOM05D006484 ORTHO05D008002 1.9e-15 87.4 225 28.4
MD09G1034700 Malus domestica HOM05D006484 ORTHO05D008002 1.9e-15 87.4 89 52.8
TPR.G33278 Trifolium pratense HOM05D006484 ORTHO05D008002 2.1e-14 84.0 52 75.0
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 6.6e-08 62.4 34 85.3
PRCOL_00006041 Prasinoderma coloniale HOM05D006484 ORTHO05D008002 1.5e-07 61.2 129 32.6
MCO09G217 Micromonas commoda HOM05D006484 ORTHO05D008002 4.7e-06 56.2 171 27.5


User provided reference genes

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