Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 2.0e-140 502.7 304 100.0
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 1.4e-88 330.5 305 65.6
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 5.1e-83 312.0 305 70.8
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 4.7e-73 278.9 211 72.0
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 9.9e-71 271.2 210 71.4
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 9.9e-71 271.2 210 71.4
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 1.1e-53 214.5 212 55.7
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 1.1e-48 198.0 305 41.0
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 9.0e-48 194.9 308 44.5
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 2.6e-47 193.4 228 48.7
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 6.5e-46 188.7 200 53.5
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 1.2e-44 184.5 233 46.4
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 6.0e-44 182.2 215 52.6
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 7.9e-44 181.8 225 50.7
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 1.3e-43 181.0 231 49.4
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 3.0e-43 179.9 208 50.5
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 3.0e-43 179.9 196 55.1
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 1.5e-42 177.6 250 44.8
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 3.7e-41 172.9 313 37.7
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 6.2e-41 172.2 226 48.2
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 6.2e-41 172.2 231 45.5
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 1.8e-40 170.6 243 44.9
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 3.1e-40 169.9 215 49.3
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 6.9e-40 168.7 200 48.0
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 6.9e-40 168.7 251 44.6
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 9.0e-40 168.3 305 39.3
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 9.0e-40 168.3 215 50.2
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 1.2e-39 167.9 215 49.3
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 2.0e-39 167.2 199 48.7
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 2.6e-39 166.8 197 49.7
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 5.8e-39 165.6 246 43.9
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 7.6e-39 165.2 231 46.3
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 1.0e-38 164.9 256 43.0
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 1.7e-38 164.1 199 53.8
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 2.2e-38 163.7 211 46.9
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 2.2e-38 163.7 195 50.8
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 2.2e-38 163.7 232 45.7
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 2.2e-38 163.7 269 42.4
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 5.0e-38 162.5 212 47.6
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 8.4e-38 161.8 199 50.8
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 1.4e-37 161.0 236 43.6
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 2.5e-37 160.2 215 50.2
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 4.2e-37 159.5 232 45.3
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 4.2e-37 159.5 221 49.3
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 9.3e-37 158.3 163 55.8
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 9.3e-37 158.3 205 46.3
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 1.2e-36 157.9 222 47.3
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 1.2e-36 157.9 191 49.2
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 1.2e-36 157.9 211 49.3
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 2.1e-36 157.1 186 47.3
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 3.5e-36 156.4 188 52.7
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 3.5e-36 156.4 241 42.3
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 4.6e-36 156.0 205 45.9
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 7.9e-36 155.2 236 44.5
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 1.0e-35 154.8 188 51.6
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 1.3e-35 154.5 242 41.7
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 2.3e-35 153.7 241 41.9
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 3.0e-35 153.3 201 47.3
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 3.0e-35 153.3 199 46.7
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 3.9e-35 152.9 212 47.6
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 5.1e-35 152.5 200 52.0
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 5.1e-35 152.5 214 48.1
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 1.1e-34 151.4 212 47.2
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 3.3e-34 149.8 227 43.2
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 4.3e-34 149.4 187 48.7
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 5.7e-34 149.1 227 46.3
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 5.7e-34 149.1 180 50.6
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 1.3e-33 147.9 194 45.9
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 1.3e-33 147.9 210 43.3
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 1.6e-33 147.5 216 46.8
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 2.2e-33 147.1 184 46.7
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 3.7e-33 146.4 185 45.9
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 1.4e-32 144.4 185 51.4
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 1.4e-32 144.4 231 44.2
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 5.3e-32 142.5 197 44.2
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 9.0e-32 141.7 178 51.1
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 2.0e-31 140.6 217 44.2
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 2.6e-31 140.2 183 44.3
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 2.6e-31 140.2 183 44.3
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 2.6e-31 140.2 183 44.3
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 4.5e-31 139.4 250 37.6
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 4.5e-31 139.4 208 42.3
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 1.3e-30 137.9 186 42.5
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 3.8e-30 136.3 192 47.4
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 3.8e-30 136.3 312 35.6
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 8.5e-30 135.2 207 44.0
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 8.5e-30 135.2 207 44.0
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 1.4e-29 134.4 223 40.4
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 2.5e-29 133.7 182 46.2
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 7.2e-29 132.1 227 41.9
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 3.6e-28 129.8 224 39.7
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 4.6e-28 129.4 185 44.3
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 8.8e-27 125.2 236 35.6
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 7.4e-26 122.1 219 36.1
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 1.7e-25 120.9 187 40.1
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 1.7e-25 120.9 193 40.9
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 4.1e-24 116.3 211 40.8
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 3.4e-23 113.2 178 39.3
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 8.5e-22 108.6 180 45.0
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 1.1e-16 91.7 131 46.6
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 5.9e-15 85.9 271 29.2
Pp3c27_4140 Physcomitrium patens HOM05D006718 ORTHO05D008492 4.7e-12 76.3 268 28.7
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 8.0e-12 75.5 161 33.5
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 9.7e-10 68.6 254 26.8
Peaxi162Scf00558g00016 Petunia axillaris HOM05D006718 ORTHO05D008492 1.4e-08 64.7 171 31.6
CBR_g22941 Chara braunii HOM05D006718 ORTHO05D008492 1.7e-06 57.8 270 28.5


User provided reference genes

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