Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_28897 Corchorus olitorius HOM05D007021 ORTHO05D008916 5.5e-102 374.4 201 100.0
Gohir.A09G174900 Gossypium hirsutum HOM05D007021 ORTHO05D008916 3.8e-71 271.9 197 76.6
Gorai.006G191500 Gossypium raimondii HOM05D007021 ORTHO05D008916 1.5e-70 270.0 201 75.6
Thecc.03G058600 Theobroma cacao HOM05D007021 ORTHO05D008916 3.0e-68 262.3 201 74.1
Gohir.D09G170185 Gossypium hirsutum HOM05D007021 ORTHO05D008916 3.4e-67 258.8 160 85.0
Gorai.003G035100 Gossypium raimondii HOM05D007021 ORTHO05D008916 9.1e-65 250.8 160 82.5
Gohir.D03G033500 Gossypium hirsutum HOM05D007021 ORTHO05D008916 3.5e-64 248.8 160 81.2
Gohir.D08G085600 Gossypium hirsutum HOM05D007021 ORTHO05D008916 1.0e-63 247.3 160 81.2
CiPaw.16G096000 Carya illinoinensis HOM05D007021 ORTHO05D008916 1.6e-61 240.0 167 79.6
QL10p030610 Quercus lobata HOM05D007021 ORTHO05D008916 2.2e-58 229.6 165 78.8
Atru.chr9.1670 Acer truncatum HOM05D007021 ORTHO05D008916 2.4e-57 226.1 179 69.3
Dinv18013 Davidia involucrata HOM05D007021 ORTHO05D008916 3.1e-57 225.7 165 76.4
Cfa019639 Carpinus fangiana HOM05D007021 ORTHO05D008916 4.1e-57 225.3 166 75.3
Gohir.1Z049463 Gossypium hirsutum HOM05D007021 ORTHO05D008916 1.6e-56 223.4 201 67.7
CSS0017706 Camellia sinensis var. sinensis HOM05D007021 ORTHO05D008916 1.7e-55 219.9 167 74.3
Gorai.004G090100 Gossypium raimondii HOM05D007021 ORTHO05D008916 1.7e-55 219.9 136 84.6
Hma1.2p1_0163F.1_g073000 Hydrangea macrophylla HOM05D007021 ORTHO05D008916 1.7e-55 219.9 161 73.3
TAR623G0728 Trochodendron aralioides HOM05D007021 ORTHO05D008916 5.0e-55 218.4 194 66.5
Ciclev10009503m.g Citrus clementina HOM05D007021 ORTHO05D008916 1.9e-54 216.5 163 72.4
GSVIVG01008459001 Vitis vinifera HOM05D007021 ORTHO05D008916 1.9e-54 216.5 165 72.7
Actinidia18882 Actinidia chinensis HOM05D004562 ORTHO05D005435 4.3e-54 215.3 158 73.4
MD06G1228200 Malus domestica HOM05D007021 ORTHO05D008916 1.2e-53 213.8 163 74.2
Potri.015G036500 Populus trichocarpa HOM05D007021 ORTHO05D008916 2.1e-53 213.0 204 62.3
CANSAT80G0297 Cannabis sativa HOM05D007021 ORTHO05D008916 2.8e-53 212.6 162 72.8
CANSAT80G1746 Cannabis sativa HOM05D007021 ORTHO05D008916 4.7e-53 211.8 162 72.8
Sabra15G0029900 Salix brachista HOM05D007021 ORTHO05D008916 6.1e-53 211.5 206 61.7
Cpa.g.sc3.381 Carica papaya HOM05D007021 ORTHO05D008916 8.0e-53 211.1 196 65.3
TWI81G0868 Tripterygium wilfordii HOM05D007021 ORTHO05D008916 5.2e-52 208.4 165 71.5
Nn7g37125 Nelumbo nucifera HOM05D007021 ORTHO05D008916 1.5e-51 206.8 183 68.9
HanXRQChr15g0486591 Helianthus annuus HOM05D007021 ORTHO05D008916 2.6e-51 206.1 182 63.2
Prupe.5G234700 Prunus persica HOM05D007021 ORTHO05D008916 2.6e-51 206.1 211 63.5
Migut.I00268 Erythranthe guttata HOM05D007021 ORTHO05D008916 7.5e-51 204.5 206 58.7
Aqoxy1G00082 Aquilegia oxysepala HOM05D007021 ORTHO05D008916 1.7e-50 203.4 188 62.8
Solyc05g006440.4 Solanum lycopersicum HOM05D007021 ORTHO05D008916 3.7e-50 202.2 196 62.2
Manes.06G004800 Manihot esculenta HOM05D007021 ORTHO05D008916 4.9e-50 201.8 176 67.6
Duzib068G0088 Durio zibethinus HOM05D007021 ORTHO05D008916 8.3e-50 201.1 201 63.2
MSTRG.11303 Avicennia marina HOM05D007021 ORTHO05D008916 1.1e-49 200.7 167 68.3
Lsat_1_v5_gn_8_115881 Lactuca sativa HOM05D007021 ORTHO05D008916 1.1e-49 200.7 134 79.9
Sopen05g002370 Solanum pennellii HOM05D007021 ORTHO05D008916 1.4e-49 200.3 196 61.7
ClCG06G014200 Citrullus lanatus HOM05D007021 ORTHO05D008916 3.2e-49 199.1 150 72.0
Lalb_Chr05g0221591 Lupinus albus HOM05D007021 ORTHO05D008916 7.0e-49 198.0 164 70.7
PGR044G2095 Punica granatum HOM05D007021 ORTHO05D008916 7.0e-49 198.0 133 81.2
FAN08G1321 Fragaria x ananassa HOM05D007021 ORTHO05D008916 1.6e-48 196.8 167 70.7
FvH4_5g17480 Fragaria vesca HOM05D007021 ORTHO05D008916 2.0e-48 196.4 167 70.7
FAN04G2374 Fragaria x ananassa HOM05D007021 ORTHO05D008916 2.0e-48 196.4 167 70.1
FAN18G1853 Fragaria x ananassa HOM05D007021 ORTHO05D008916 2.0e-48 196.4 167 70.7
PGSC0003DMG400022612 Solanum tuberosum HOM05D007021 ORTHO05D008916 2.0e-48 196.4 158 70.9
PSO339G6055 Papaver somniferum HOM05D007021 ORTHO05D008916 2.7e-48 196.1 155 70.3
RcHm_v2.0_Chr7g0178211 Rosa chinensis HOM05D007021 ORTHO05D008916 2.7e-48 196.1 166 69.3
Sed0001257 Sechium edule HOM05D007021 ORTHO05D008916 2.7e-48 196.1 145 73.8
Rhsim12G0138000 Rhododendron simsii HOM05D007021 ORTHO05D008916 1.7e-47 193.4 119 87.4
MELO3C017374.2 Cucumis melo HOM05D007021 ORTHO05D008916 3.9e-47 192.2 145 71.7
Glyma.05G246900 Glycine max HOM05D007021 ORTHO05D008916 3.9e-47 192.2 151 72.8
ATR1096G089 Amborella trichopoda HOM05D007021 ORTHO05D008916 6.6e-47 191.4 145 71.0
Glyma.08G055300 Glycine max HOM05D007021 ORTHO05D008916 8.6e-47 191.0 136 78.7
Nitab4.5_0004119g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 1.1e-46 190.7 159 70.4
CsaV3_1G004470 Cucumis sativus L. HOM05D007021 ORTHO05D008916 1.5e-46 190.3 145 71.0
Nitab4.5_0002312g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 1.9e-46 189.9 159 68.6
Lj9A418T22 Lonicera japonica HOM05D007021 ORTHO05D008916 2.5e-46 189.5 116 84.5
HPP92_019433 Vanilla planifolia HOM05D007021 ORTHO05D008916 3.3e-46 189.1 180 60.0
Cc04_g06110 Coffea canephora HOM05D007021 ORTHO05D008916 4.3e-46 188.7 113 87.6
Oeu046158.1 Olea europaea HOM05D007021 ORTHO05D008916 4.3e-46 188.7 111 88.3
Sc04g0004860 Simmondsia chinensis HOM05D007021 ORTHO05D008916 4.3e-46 188.7 133 75.2
VMungo0251G3404 Vigna mungo HOM05D007021 ORTHO05D008916 5.6e-46 188.3 125 82.4
ECA232G1431 Erigeron canadensis HOM05D000006 ORTHO05D000091 7.3e-46 188.0 121 79.3
CAN.G159.4 Capsicum annuum HOM05D007021 ORTHO05D008916 9.5e-46 187.6 179 64.2
Phvul.002G331000 Phaseolus vulgaris HOM05D007021 ORTHO05D008916 1.6e-45 186.8 135 75.6
Eucgr.K02276 Eucalyptus grandis HOM05D007021 ORTHO05D008916 2.8e-45 186.0 156 71.2
PSO384G2008 Papaver somniferum HOM05D007021 ORTHO05D008916 3.6e-45 185.7 118 83.1
arahy.Tifrunner.gnm1.ann1.I2I16V Arachis hypogaea HOM05D007021 ORTHO05D008916 4.7e-45 185.3 136 75.0
Haze_18883 Corylus avellana HOM05D007021 ORTHO05D008916 4.7e-45 185.3 142 72.5
THA.LOC104821829 Tarenaya hassleriana HOM05D007021 ORTHO05D008916 1.4e-44 183.7 141 69.5
unitig_899.g15339 Utricularia gibba HOM05D007021 ORTHO05D008916 1.4e-44 183.7 130 76.9
Lj4g0002555 Lotus japonicus HOM05D007021 ORTHO05D008916 2.3e-44 183.0 121 79.3
MBI13_g41749_MAGBIO Magnolia biondii HOM05D007021 ORTHO05D008916 2.3e-44 183.0 114 83.3
arahy.Tifrunner.gnm1.ann1.2FQ1SS Arachis hypogaea HOM05D007021 ORTHO05D008916 4.0e-44 182.2 126 79.4
FAN13G1201 Fragaria x ananassa HOM05D007021 ORTHO05D008916 5.2e-44 181.8 143 74.1
Aa31LG8G4800 Aethionema arabicum HOM05D007021 ORTHO05D008916 8.9e-44 181.0 120 75.8
TPR.G1394 Trifolium pratense HOM05D007021 ORTHO05D008916 1.5e-43 180.3 130 74.6
Psat7g001280 Pisum sativum HOM05D007021 ORTHO05D008916 2.6e-43 179.5 107 85.0
Thhalv10021570m.g Eutrema salsugineum HOM05D007021 ORTHO05D008916 3.4e-43 179.1 127 72.4
Medtr8g107430 Medicago truncatula HOM05D007021 ORTHO05D008916 5.8e-43 178.3 107 86.0
BcaB06g25855 Brassica carinata HOM05D007021 ORTHO05D008916 7.5e-43 177.9 152 65.8
Hund08707 Selenicereus undatus HOM05D007021 ORTHO05D008916 7.5e-43 177.9 123 76.4
C05p48360 Brassica napus HOM05D007021 ORTHO05D008916 2.9e-42 176.0 194 56.7
BcaC05g28735 Brassica carinata HOM05D007021 ORTHO05D008916 3.7e-42 175.6 107 82.2
BolC5t33573H Brassica oleracea HOM05D007021 ORTHO05D008916 3.7e-42 175.6 107 82.2
Sp3g16050 Schrenkiella parvula HOM05D007021 ORTHO05D008916 3.7e-42 175.6 122 75.4
Zm00001eb150510 Zea mays HOM05D007021 ORTHO05D008916 8.3e-42 174.5 169 62.7
Os01g0805200 Oryza sativa ssp. japonica HOM05D007021 ORTHO05D008916 2.4e-41 172.9 109 79.8
CARHR093260 Cardamine hirsuta HOM05D007021 ORTHO05D008916 7.0e-41 171.4 145 62.8
CDE04G1339 Ceratophyllum demersum HOM05D000015 ORTHO05D002445 7.0e-41 171.4 127 73.2
A05p31870 Brassica napus HOM05D007021 ORTHO05D008916 2.1e-40 169.9 188 54.8
BraA05t22019Z Brassica rapa HOM05D007021 ORTHO05D008916 2.1e-40 169.9 188 54.8
Carub.0003s1766 Capsella rubella HOM05D007021 ORTHO05D008916 2.7e-40 169.5 106 80.2
SEGI_41594 Sequoiadendron giganteum HOM05D007021 ORTHO05D008916 2.7e-40 169.5 115 80.9
EL10Ac8g19152 Beta vulgaris HOM05D007021 ORTHO05D008916 3.5e-40 169.1 153 65.4
AL3G31100 Arabidopsis lyrata HOM05D007021 ORTHO05D008916 4.6e-40 168.7 106 79.2
AT3G17930 Arabidopsis thaliana HOM05D007021 ORTHO05D008916 4.6e-40 168.7 106 79.2
Pp3c5_23310 Physcomitrium patens HOM05D007021 ORTHO05D008916 1.5e-38 163.7 133 65.4
SMO353G0175 Selaginella moellendorffii HOM05D007021 ORTHO05D008916 1.4e-36 157.1 137 61.3
Mapoly0023s0040 Marchantia polymorpha HOM05D007021 ORTHO05D008916 5.2e-36 155.2 131 61.8
AagrBONN_evm.TU.Sc2ySwM_340.579 Anthoceros agrestis HOM05D007021 ORTHO05D008916 7.5e-35 151.4 177 52.5
AagrBONN_evm.TU.Sc2ySwM_117.710 Anthoceros agrestis HOM05D007021 ORTHO05D008916 1.3e-34 150.6 181 51.4
CDE07G1635 Ceratophyllum demersum HOM05D007021 ORTHO05D008916 9.2e-33 144.4 104 72.1
DCAR_014390 Daucus carota HOM05D007021 ORTHO05D008916 1.0e-31 141.0 89 85.4
Peaxi162Scf00828g00016 Petunia axillaris HOM05D007021 ORTHO05D008916 1.5e-30 137.1 86 86.0
AUR62025165 Chenopodium quinoa HOM05D007021 ORTHO05D008916 1.9e-30 136.7 143 57.3
CBR_g48186 Chara braunii HOM05D007021 ORTHO05D008916 4.3e-30 135.6 106 63.2
AUR62029014 Chenopodium quinoa HOM05D007021 ORTHO05D008916 1.6e-29 133.7 86 81.4
Cre01.g000850 Chlamydomonas reinhardtii HOM05D007021 ORTHO05D008916 3.2e-25 119.4 120 50.8
MD14G1237400 Malus domestica HOM05D007021 ORTHO05D008916 6.9e-20 101.7 67 76.1
Oeu010907.1 Olea europaea HOM05D007021 ORTHO05D008916 6.9e-20 101.7 128 49.2
MCO16G182 Micromonas commoda HOM05D007021 ORTHO05D008916 2.9e-18 96.3 86 57.0
PRCOL_00000692 Prasinoderma coloniale HOM05D007021 ORTHO05D008916 4.6e-16 89.0 104 47.1


User provided reference genes

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