Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_28844 Corchorus olitorius HOM05D002798 ORTHO05D003052 2.1e-132 475.7 246 100.0
Thecc.03G109900 Theobroma cacao HOM05D002798 ORTHO05D003052 6.3e-84 314.7 243 72.0
Duzib068G0984 Durio zibethinus HOM05D002798 ORTHO05D003052 5.4e-75 285.0 243 66.7
Gohir.D07G062900 Gossypium hirsutum HOM05D002798 ORTHO05D003052 2.8e-68 262.7 248 62.1
Gorai.001G066400 Gossypium raimondii HOM05D002798 ORTHO05D003052 1.0e-62 244.2 299 52.2
Gohir.A07G058100 Gossypium hirsutum HOM05D002798 ORTHO05D003052 2.4e-59 233.0 299 50.8
QL10p021033 Quercus lobata HOM05D002798 ORTHO05D003052 5.8e-45 185.3 249 48.2
Cfa017736 Carpinus fangiana HOM05D002798 ORTHO05D003052 4.3e-40 169.1 253 48.2
Haze_18515 Corylus avellana HOM05D002798 ORTHO05D003052 9.5e-40 167.9 249 46.6
Ciclev10019179m.g Citrus clementina HOM05D002798 ORTHO05D003052 1.5e-37 160.6 231 46.3
Dinv38632 Davidia involucrata HOM05D002798 ORTHO05D003052 1.5e-37 160.6 232 44.8
Atru.chr9.609 Acer truncatum HOM05D002798 ORTHO05D003052 2.0e-37 160.2 243 46.5
Manes.06G080200 Manihot esculenta HOM05D002798 ORTHO05D003052 2.6e-37 159.8 255 45.9
GSVIVG01008167001 Vitis vinifera HOM05D002798 ORTHO05D003052 3.8e-36 156.0 244 44.7
CSS0020816 Camellia sinensis var. sinensis HOM05D002798 ORTHO05D003052 5.4e-35 152.1 221 43.0
CiPaw.15G115500 Carya illinoinensis HOM05D002798 ORTHO05D003052 2.1e-34 150.2 252 45.2
Rhsim12G0147500 Rhododendron simsii HOM05D002798 ORTHO05D003052 1.7e-33 147.1 247 44.9
Nn4g23559 Nelumbo nucifera HOM05D002798 ORTHO05D003052 1.9e-32 143.7 169 48.5
Actinidia35054 Actinidia chinensis HOM05D002798 ORTHO05D003052 1.4e-30 137.5 252 40.5
EL10Ac5g11197 Beta vulgaris HOM05D002798 ORTHO05D003052 1.4e-30 137.5 157 50.3
Aqoxy3G03763 Aquilegia oxysepala HOM05D002798 ORTHO05D003052 1.2e-29 134.4 101 62.4
TAR629G3472 Trochodendron aralioides HOM05D002798 ORTHO05D003052 5.8e-29 132.1 254 40.6
Cpa.g.sc3.222 Carica papaya HOM05D002798 ORTHO05D003052 1.7e-28 130.6 247 41.7
MBI15_g25910_MAGBIO Magnolia biondii HOM05D002798 ORTHO05D003052 1.7e-28 130.6 237 43.0
RcHm_v2.0_Chr7g0183831 Rosa chinensis HOM05D002798 ORTHO05D003052 1.7e-28 130.6 138 53.6
Cc04_g08170 Coffea canephora HOM05D002798 ORTHO05D003052 8.4e-28 128.3 194 44.3
AUR62039663 Chenopodium quinoa HOM05D002798 ORTHO05D003052 1.4e-27 127.5 220 39.1
DCAR_014019 Daucus carota HOM05D002798 ORTHO05D003052 1.4e-27 127.5 162 48.1
Sopen06g026620 Solanum pennellii HOM05D002798 ORTHO05D003052 2.4e-27 126.7 182 45.1
Nitab4.5_0004190g0020 Nicotiana tabacum HOM05D002798 ORTHO05D003052 4.2e-27 125.9 191 38.7
Nitab4.5_0002449g0110 Nicotiana tabacum HOM05D002798 ORTHO05D003052 5.4e-27 125.6 180 41.1
FAN13G0702 Fragaria x ananassa HOM05D002798 ORTHO05D003052 7.1e-27 125.2 138 51.4
AUR62032144 Chenopodium quinoa HOM05D002798 ORTHO05D003052 9.3e-27 124.8 220 39.1
FvH4_5g13310 Fragaria vesca HOM05D002798 ORTHO05D003052 9.3e-27 124.8 138 52.2
Ah.02g114320 Amaranthus hybridus HOM05D002798 ORTHO05D003052 1.2e-26 124.4 122 54.1
Solyc06g069360.3 Solanum lycopersicum HOM05D002798 ORTHO05D003052 2.1e-26 123.6 182 44.0
PGSC0003DMG400004060 Solanum tuberosum HOM05D002798 ORTHO05D003052 2.1e-26 123.6 194 41.8
FAN08G3543 Fragaria x ananassa HOM05D002798 ORTHO05D003052 3.5e-26 122.9 138 51.4
HanXRQChr09g0270521 Helianthus annuus HOM05D002798 ORTHO05D003052 4.6e-26 122.5 165 45.5
MD06G1206300 Malus domestica HOM05D002798 ORTHO05D003052 7.8e-26 121.7 142 47.2
FAN18G0550 Fragaria x ananassa HOM05D002798 ORTHO05D003052 1.0e-25 121.3 135 52.6
Sed0027849 Sechium edule HOM05D002798 ORTHO05D003052 1.0e-25 121.3 124 54.8
Prupe.5G210700 Prunus persica HOM05D002798 ORTHO05D003052 2.3e-25 120.2 242 39.7
Sc12g0006850 Simmondsia chinensis HOM05D002798 ORTHO05D003052 3.0e-25 119.8 243 39.1
ClCG04G011520 Citrullus lanatus HOM05D002798 ORTHO05D003052 5.1e-25 119.0 110 56.4
Eucgr.B00646 Eucalyptus grandis HOM05D002798 ORTHO05D003052 5.1e-25 119.0 146 47.3
Lj9C437G7 Lonicera japonica HOM05D002798 ORTHO05D003052 8.7e-25 118.2 247 36.8
Phvul.003G181800 Phaseolus vulgaris HOM05D002798 ORTHO05D003052 3.3e-24 116.3 99 61.6
Psat4g045320 Pisum sativum HOM05D002798 ORTHO05D003052 3.3e-24 116.3 137 51.8
VMungo1215G0992 Vigna mungo HOM05D002798 ORTHO05D003052 4.3e-24 115.9 179 44.1
CAN.G587.64 Capsicum annuum HOM05D002798 ORTHO05D003052 7.3e-24 115.2 172 41.3
PGR083G0612 Punica granatum HOM05D002798 ORTHO05D003052 7.3e-24 115.2 129 51.2
Migut.D01494 Erythranthe guttata HOM05D002798 ORTHO05D003052 2.8e-23 113.2 175 41.7
Peaxi162Scf00013g00839 Petunia axillaris HOM05D002798 ORTHO05D003052 4.8e-23 112.5 209 38.3
Lsat_1_v5_gn_4_112441 Lactuca sativa HOM05D002798 ORTHO05D003052 6.2e-23 112.1 115 53.9
ATR0691G105 Amborella trichopoda HOM05D002798 ORTHO05D003052 2.4e-22 110.2 129 49.6
CDE02G1860 Ceratophyllum demersum HOM05D002798 ORTHO05D003052 5.3e-22 109.0 160 45.0
Ca_21750_v3 Cicer arietinum L. HOM05D002798 ORTHO05D003052 1.5e-21 107.5 231 35.1
MELO3C002058.2 Cucumis melo HOM05D002798 ORTHO05D003052 3.4e-21 106.3 157 42.0
CsaV3_1G006290 Cucumis sativus L. HOM05D002798 ORTHO05D003052 3.4e-21 106.3 170 40.6
Glyma.17G082300 Glycine max HOM05D002798 ORTHO05D003052 4.5e-21 105.9 115 53.0
THA.LOC104819392 Tarenaya hassleriana HOM05D002798 ORTHO05D003052 7.6e-21 105.1 117 49.6
Medtr4g110090 Medicago truncatula HOM05D002798 ORTHO05D003052 2.2e-20 103.6 157 45.2
ECA232G3190 Erigeron canadensis HOM05D002798 ORTHO05D003052 1.1e-19 101.3 149 41.6
Lalb_Chr12g0197411 Lupinus albus HOM05D002798 ORTHO05D003052 1.1e-19 101.3 242 36.8
PSO782G1189 Papaver somniferum HOM05D002798 ORTHO05D003052 1.1e-19 101.3 204 37.3
Aa31LG11G2470 Aethionema arabicum HOM05D002798 ORTHO05D003052 4.6e-18 95.9 146 45.2
Hund09971 Selenicereus undatus HOM05D002798 ORTHO05D003052 1.3e-17 94.4 82 56.1
TPR.G2027 Trifolium pratense HOM05D002798 ORTHO05D003052 5.6e-16 89.0 192 34.9
unitig_22.g6640 Utricularia gibba HOM05D002798 ORTHO05D003052 2.1e-15 87.0 142 35.2
TWI56G0232 Tripterygium wilfordii HOM05D002798 ORTHO05D003052 2.8e-15 86.7 94 48.9
Potri.013G011400 Populus trichocarpa HOM05D002798 ORTHO05D003052 8.1e-15 85.1 96 46.9
Manes.08G113500 Manihot esculenta HOM05D002798 ORTHO05D003052 2.4e-14 83.6 95 47.4
Ciclev10000286m.g Citrus clementina HOM05D002798 ORTHO05D003052 5.3e-14 82.4 104 46.2
Eucgr.H03278 Eucalyptus grandis HOM05D002798 ORTHO05D003052 6.9e-14 82.0 151 37.1
PGR031G0203 Punica granatum HOM05D002798 ORTHO05D003052 1.5e-13 80.9 99 46.5
Sabra13G0010000 Salix brachista HOM05D002798 ORTHO05D003052 2.0e-13 80.5 96 43.8
TAR633G0751 Trochodendron aralioides HOM05D002798 ORTHO05D003052 2.0e-13 80.5 101 45.5
GSVIVG01031198001 Vitis vinifera HOM05D002798 ORTHO05D003052 2.0e-13 80.5 98 43.9
SEGI_23768 Sequoiadendron giganteum HOM05D002798 ORTHO05D003052 3.4e-13 79.7 186 33.9
Medtr7g112410 Medicago truncatula HOM05D002798 ORTHO05D003052 4.5e-13 79.3 220 32.7
TWI12G0598 Tripterygium wilfordii HOM05D002798 ORTHO05D003052 4.5e-13 79.3 94 44.7
DCAR_010182 Daucus carota HOM05D002798 ORTHO05D003052 5.8e-13 79.0 71 53.5
Zm00001eb380630 Zea mays HOM05D002798 ORTHO05D003052 5.8e-13 79.0 90 50.0
Psat3g013760 Pisum sativum HOM05D002798 ORTHO05D003052 1.3e-12 77.8 102 45.1
DCAR_010179 Daucus carota HOM05D002798 ORTHO05D003052 1.7e-12 77.4 71 53.5
DCAR_010180 Daucus carota HOM05D002798 ORTHO05D003052 1.7e-12 77.4 71 53.5
DCAR_010183 Daucus carota HOM05D002798 ORTHO05D003052 1.7e-12 77.4 71 53.5
DCAR_010184 Daucus carota HOM05D002798 ORTHO05D003052 1.7e-12 77.4 71 53.5
Oeu020897.2 Olea europaea HOM05D002798 ORTHO05D003052 1.7e-12 77.4 94 43.6
Os06g0283200 Oryza sativa ssp. japonica HOM05D002798 ORTHO05D003052 2.2e-12 77.0 136 34.6
Lj4g0005091 Lotus japonicus HOM05D002798 ORTHO05D003052 2.9e-12 76.6 248 31.0
Potri.005G021000 Populus trichocarpa HOM05D002798 ORTHO05D003052 2.9e-12 76.6 101 42.6
Cfa006676 Carpinus fangiana HOM05D002798 ORTHO05D003052 3.8e-12 76.3 98 45.9
Haze_04095 Corylus avellana HOM05D002798 ORTHO05D003052 3.8e-12 76.3 95 46.3
vmacro16472 Vaccinium macrocarpon HOM05D002798 ORTHO05D003052 3.8e-12 76.3 214 35.0
arahy.Tifrunner.gnm1.ann1.PTHF6B Arachis hypogaea HOM05D002798 ORTHO05D003052 8.4e-12 75.1 97 41.2
arahy.Tifrunner.gnm1.ann1.X25DG1 Arachis hypogaea HOM05D002798 ORTHO05D003052 8.4e-12 75.1 97 41.2
Atru.chr2.129 Acer truncatum HOM05D002798 ORTHO05D003052 1.1e-11 74.7 96 45.8
Lj1g0017235 Lotus japonicus HOM05D002798 ORTHO05D003052 1.1e-11 74.7 95 42.1
QL03p017951 Quercus lobata HOM05D002798 ORTHO05D003052 1.1e-11 74.7 98 44.9
Sabra05G0027000 Salix brachista HOM05D002798 ORTHO05D003052 1.1e-11 74.7 120 40.0
Manes.08G113700 Manihot esculenta HOM05D002798 ORTHO05D003052 1.9e-11 73.9 133 36.8
TPR.G1632 Trifolium pratense HOM05D002798 ORTHO05D003052 1.9e-11 73.9 220 30.5
SEGI_34081 Sequoiadendron giganteum HOM05D002798 ORTHO05D003052 4.2e-11 72.8 99 37.4
HPP92_001068 Vanilla planifolia HOM05D002798 ORTHO05D003052 9.3e-11 71.6 96 38.5
Lalb_Chr18g0045961 Lupinus albus HOM05D002798 ORTHO05D003052 1.2e-10 71.2 95 44.2
Thecc.05G319200 Theobroma cacao HOM05D002798 ORTHO05D003052 1.2e-10 71.2 93 41.9
Cpa.g.sc3064.2 Carica papaya HOM05D002798 ORTHO05D003052 2.1e-10 70.5 106 40.6
CDE02G0549 Ceratophyllum demersum HOM05D002798 ORTHO05D003052 2.7e-10 70.1 95 43.2
Duzib106G1156 Durio zibethinus HOM05D002798 ORTHO05D003052 2.7e-10 70.1 134 34.3
MBI18_g05915_MAGBIO Magnolia biondii HOM05D002798 ORTHO05D003052 2.7e-10 70.1 96 43.8
HPP92_018239 Vanilla planifolia HOM05D002798 ORTHO05D003052 3.5e-10 69.7 129 38.8
Lj5A342T76 Lonicera japonica HOM05D002798 ORTHO05D003052 4.6e-10 69.3 173 28.9
Aa31LG5G16080 Aethionema arabicum HOM05D002798 ORTHO05D003052 6.0e-10 68.9 92 42.4
Rhsim12G0147800 Rhododendron simsii HOM05D000812 ORTHO05D000672 6.0e-10 68.9 160 36.2
Gohir.A13G174880 Gossypium hirsutum HOM05D002798 ORTHO05D003052 7.9e-10 68.6 94 41.5
Gohir.D13G180700 Gossypium hirsutum HOM05D002798 ORTHO05D003052 7.9e-10 68.6 94 41.5
Gorai.013G206200 Gossypium raimondii HOM05D002798 ORTHO05D003052 7.9e-10 68.6 94 41.5
Gohir.D11G281300 Gossypium hirsutum HOM05D002798 ORTHO05D003052 1.0e-09 68.2 101 41.6
Gorai.007G303700 Gossypium raimondii HOM05D002798 ORTHO05D003052 1.0e-09 68.2 101 41.6
ATR0706G010 Amborella trichopoda HOM05D002798 ORTHO05D003052 3.9e-09 66.2 92 43.5
Ca_09324_v3 Cicer arietinum L. HOM05D002798 ORTHO05D003052 3.9e-09 66.2 64 54.7
Cc02_g34580 Coffea canephora HOM05D002798 ORTHO05D003052 3.9e-09 66.2 163 31.3
Glyma.10G149400 Glycine max HOM05D002798 ORTHO05D003052 3.9e-09 66.2 94 42.6
Lj5g0008592 Lotus japonicus HOM05D002798 ORTHO05D003052 3.9e-09 66.2 95 41.1
Duzib128G0304 Durio zibethinus HOM05D002798 ORTHO05D003052 5.1e-09 65.9 101 39.6
VMungo0720G0572 Vigna mungo HOM05D002798 ORTHO05D003052 5.1e-09 65.9 94 41.5
THA.LOC104802783 Tarenaya hassleriana HOM05D002798 ORTHO05D003052 6.7e-09 65.5 102 37.3
Prupe.6G316500 Prunus persica HOM05D002798 ORTHO05D003052 8.7e-09 65.1 97 41.2
RcHm_v2.0_Chr3g0456661 Rosa chinensis HOM05D002798 ORTHO05D003052 1.1e-08 64.7 112 42.0
Lalb_Chr15g0077581 Lupinus albus HOM05D002798 ORTHO05D003052 1.5e-08 64.3 68 50.0
Phvul.007G199500 Phaseolus vulgaris HOM05D002798 ORTHO05D003052 1.9e-08 63.9 94 40.4
BolC3t16446H Brassica oleracea HOM05D002798 ORTHO05D003052 2.5e-08 63.5 92 39.1
AUR62000702 Chenopodium quinoa HOM05D002798 ORTHO05D003052 3.3e-08 63.2 94 35.1
AUR62005253 Chenopodium quinoa HOM05D002798 ORTHO05D003052 3.3e-08 63.2 94 35.1
Lalb_Chr06g0167561 Lupinus albus HOM05D002798 ORTHO05D003052 3.3e-08 63.2 120 32.5
FvH4_6g07080 Fragaria vesca HOM05D002798 ORTHO05D003052 7.4e-08 62.0 99 43.4
FAN14G2831 Fragaria x ananassa HOM05D002798 ORTHO05D003052 7.4e-08 62.0 99 43.4
C03p41660 Brassica napus HOM05D002798 ORTHO05D003052 1.6e-07 60.8 93 37.6
MELO3C015274.2 Cucumis melo HOM05D002798 ORTHO05D003052 2.1e-07 60.5 93 37.6
BraA03t12599Z Brassica rapa HOM05D002798 ORTHO05D003052 2.8e-07 60.1 99 37.4
BraA05t22950Z Brassica rapa HOM05D002798 ORTHO05D003052 2.8e-07 60.1 99 35.4
FAN09G4433 Fragaria x ananassa HOM05D002798 ORTHO05D003052 3.7e-07 59.7 99 40.4
ClCG03G017550 Citrullus lanatus HOM05D002798 ORTHO05D003052 6.2e-07 58.9 95 34.7
FAN05G2011 Fragaria x ananassa HOM05D002798 ORTHO05D003052 6.2e-07 58.9 99 41.4
A03p34250 Brassica napus HOM05D002798 ORTHO05D003052 8.1e-07 58.5 100 35.0
Ah.06g189100 Amaranthus hybridus HOM05D002798 ORTHO05D003052 1.1e-06 58.2 105 34.3
BcaC05g29788 Brassica carinata HOM05D002798 ORTHO05D003052 1.1e-06 58.2 99 34.3
BcaC05g30098 Brassica carinata HOM05D002798 ORTHO05D003052 1.1e-06 58.2 98 34.7
BcaC05g30102 Brassica carinata HOM05D002798 ORTHO05D003052 1.1e-06 58.2 98 34.7
BolC5t34812H Brassica oleracea HOM05D002798 ORTHO05D003052 1.1e-06 58.2 98 34.7
HPP92_006898 Vanilla planifolia HOM05D002798 ORTHO05D003052 1.1e-06 58.2 120 35.0
BcaB04g19250 Brassica carinata HOM05D002798 ORTHO05D003052 1.4e-06 57.8 91 38.5
CsaV3_1G038480 Cucumis sativus L. HOM05D002798 ORTHO05D003052 1.4e-06 57.8 93 36.6
MD12G1209300 Malus domestica HOM05D002798 ORTHO05D003052 1.8e-06 57.4 131 32.8
CARHR080110 Cardamine hirsuta HOM05D002798 ORTHO05D003052 2.4e-06 57.0 99 35.4
Rhsim11G0092600 Rhododendron simsii HOM05D002798 ORTHO05D003052 2.4e-06 57.0 72 43.1
Gorai.013G127600 Gossypium raimondii HOM05D002798 ORTHO05D003052 9.0e-06 55.1 85 38.8


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