Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 7.1e-198 693.7 351 100.0
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 3.6e-173 611.7 343 89.5
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 3.8e-167 591.7 352 85.2
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 2.2e-162 575.9 343 86.0
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 8.2e-162 573.9 345 84.6
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 4.2e-142 508.4 343 73.8
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 3.2e-137 492.3 343 72.0
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 4.5e-136 488.4 344 72.4
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 8.6e-135 484.2 345 70.1
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 1.2e-133 480.3 342 69.3
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 6.8e-132 474.6 342 71.3
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 4.4e-131 471.9 279 86.0
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 6.4e-130 468.0 342 69.9
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 9.2e-129 464.2 343 68.5
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 1.2e-128 463.8 342 69.9
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 2.7e-128 462.6 342 66.4
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 3.5e-128 462.2 344 67.4
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 4.6e-128 461.8 342 67.3
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 1.3e-127 460.3 340 70.9
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 3.9e-127 458.8 344 68.0
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 5.0e-127 458.4 344 67.4
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 1.1e-126 457.2 344 66.9
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 9.5e-126 454.1 340 65.6
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 1.2e-125 453.8 343 67.3
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 1.1e-124 450.7 349 66.2
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 1.4e-124 450.3 342 68.1
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 5.2e-124 448.4 343 67.9
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 4.4e-123 445.3 340 70.0
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 1.3e-122 443.7 340 65.3
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.3e-122 443.7 342 64.6
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.3e-122 443.7 344 64.2
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 6.4e-122 441.4 344 64.8
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 7.1e-121 438.0 343 65.9
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 1.3e-119 433.7 343 63.8
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.3e-119 433.7 356 62.9
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 1.3e-119 433.7 347 62.5
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 1.1e-118 430.6 345 66.4
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 4.3e-118 428.7 344 65.4
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 7.3e-118 427.9 341 64.2
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 1.2e-117 427.2 277 73.6
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 1.6e-117 426.8 344 61.3
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 4.0e-116 422.2 343 63.6
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 5.2e-116 421.8 344 64.0
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 5.2e-116 421.8 343 62.1
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 6.8e-116 421.4 344 65.1
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 6.8e-116 421.4 346 64.5
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 6.8e-116 421.4 344 64.2
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 1.3e-111 407.1 344 61.9
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 1.5e-110 403.7 344 61.3
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 7.3e-110 401.4 426 52.1
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 9.6e-110 401.0 341 61.0
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.2e-109 400.6 342 63.5
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 1.2e-109 400.6 345 62.0
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 2.1e-109 399.8 342 63.5
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 1.1e-108 397.5 341 60.4
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 1.1e-108 397.5 342 61.4
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 5.2e-108 395.2 339 60.2
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 5.2e-108 395.2 342 59.6
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 8.9e-108 394.4 342 61.1
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 4.4e-107 392.1 338 61.8
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 4.9e-106 388.7 347 59.9
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 9.3e-105 384.4 346 59.8
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 2.1e-104 383.3 338 58.3
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 2.7e-104 382.9 356 58.7
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 3.5e-104 382.5 351 59.5
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 4.6e-104 382.1 343 57.1
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 7.8e-104 381.3 345 60.0
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 1.5e-102 377.1 355 57.5
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 1.9e-102 376.7 380 55.0
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 5.6e-102 375.2 344 57.6
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 1.1e-100 370.9 341 58.1
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 4.0e-100 369.0 345 56.5
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 6.9e-100 368.2 343 56.6
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 2.7e-96 356.3 334 56.0
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 4.6e-96 355.5 342 57.3
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 4.6e-96 355.5 310 59.7
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 1.3e-95 354.0 339 56.9
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 1.5e-94 350.5 338 56.2
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 1.3e-93 347.4 349 53.0
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 1.1e-92 344.4 343 55.4
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 2.0e-91 340.1 349 51.6
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 3.8e-90 335.9 277 60.3
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 1.9e-89 333.6 352 52.6
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 2.7e-88 329.7 284 61.3
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 3.0e-87 326.2 340 53.5
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 5.6e-86 322.0 335 52.8
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 7.6e-83 311.6 343 51.6
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 1.1e-81 307.8 210 72.4
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 2.8e-77 293.1 210 68.6
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 3.7e-77 292.7 303 50.5
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 1.4e-63 247.7 246 54.5
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 5.3e-52 209.1 176 62.5
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 5.3e-52 209.1 298 44.0
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 5.0e-50 202.6 334 37.4
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 6.5e-50 202.2 175 59.4
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 4.7e-40 169.5 187 51.3
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 2.4e-36 157.1 291 36.8
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 1.0e-34 151.8 199 46.7
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 6.5e-34 149.1 269 34.9
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 2.5e-33 147.1 341 33.4
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 3.0e-31 140.2 167 48.5
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 1.2e-27 128.3 131 53.4
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 1.6e-27 127.9 88 71.6
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 8.6e-26 122.1 181 39.8
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 1.9e-25 120.9 128 49.2
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 1.6e-24 117.9 174 43.1
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 6.1e-24 115.9 123 52.8
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 1.2e-22 111.7 110 54.5
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 1.2e-19 101.7 118 49.2
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 1.5e-14 84.7 108 38.9
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 2.9e-13 80.5 84 54.8
Nn5g30604 Nelumbo nucifera HOM05D006958 ORTHO05D008814 9.5e-09 65.5 72 50.0
Ah.09g227430 Amaranthus hybridus HOM05D006958 ORTHO05D008814 1.4e-07 61.6 69 52.2
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 5.2e-07 59.7 50 56.0
HPP92_009560 Vanilla planifolia HOM05D001084 ORTHO05D001275 9.8e-06 55.5 52 55.8


User provided reference genes

Program Settings