Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 1.2e-211 739.6 373 100.0
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 2.6e-182 642.1 373 85.8
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 1.1e-177 626.7 375 83.2
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 7.2e-164 580.9 389 76.1
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 1.1e-161 573.5 406 72.9
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 1.5e-153 546.6 373 75.3
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 7.7e-150 534.3 374 73.3
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 2.9e-149 532.3 378 72.5
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 2.9e-149 532.3 378 72.5
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 2.9e-149 532.3 373 71.8
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 5.5e-148 528.1 378 70.6
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 1.2e-147 526.9 378 70.6
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 2.1e-147 526.2 377 70.8
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 5.2e-146 521.5 373 71.6
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 4.4e-145 518.5 366 71.9
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 7.4e-145 517.7 372 69.9
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 1.3e-144 516.9 375 69.6
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 6.3e-144 514.6 374 70.3
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 1.1e-143 513.8 355 71.5
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 1.1e-143 513.8 357 72.3
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 4.1e-143 511.9 372 69.4
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 9.1e-143 510.8 373 70.0
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 1.2e-142 510.4 379 69.9
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 1.6e-142 510.0 366 69.7
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 2.6e-142 509.2 357 71.4
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 3.5e-142 508.8 373 69.4
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 7.7e-142 507.7 341 73.9
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 1.7e-141 506.5 373 69.4
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 1.7e-141 506.5 365 69.9
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 5.0e-141 505.0 365 69.3
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 1.9e-140 503.1 374 67.9
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 4.2e-140 501.9 372 67.7
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 7.2e-140 501.1 372 67.7
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 7.2e-140 501.1 365 69.0
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 1.6e-139 500.0 363 69.1
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 1.0e-138 497.3 311 76.8
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 1.8e-138 496.5 375 66.9
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 3.0e-138 495.7 376 66.8
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 4.0e-138 495.4 368 68.5
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 1.2e-137 493.8 373 67.0
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 3.3e-137 492.3 372 67.2
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 9.7e-137 490.7 372 67.2
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 2.8e-136 489.2 372 66.9
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 2.8e-136 489.2 373 67.0
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 3.7e-136 488.8 363 68.3
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 6.3e-136 488.0 365 66.8
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 1.1e-135 487.3 372 66.9
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 1.1e-135 487.3 371 66.8
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 1.4e-135 486.9 373 66.5
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 3.1e-135 485.7 377 69.5
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 7.0e-135 484.6 372 66.9
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 9.1e-135 484.2 313 75.4
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 9.1e-135 484.2 313 75.4
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 1.6e-134 483.4 344 68.6
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 2.0e-134 483.0 372 65.6
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.7e-134 482.6 420 61.4
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 2.7e-134 482.6 371 67.1
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 3.5e-134 482.3 372 66.7
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 3.5e-134 482.3 374 66.3
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 5.9e-134 481.5 374 66.6
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 7.7e-134 481.1 370 66.2
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 7.7e-134 481.1 370 66.2
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 1.7e-133 479.9 372 66.7
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 1.7e-133 479.9 370 66.2
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 1.7e-133 479.9 373 66.0
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 3.2e-132 475.7 369 64.5
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 4.2e-132 475.3 358 67.6
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 7.2e-132 474.6 338 69.5
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 9.4e-132 474.2 378 65.9
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 2.3e-130 469.5 311 72.7
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 4.0e-130 468.8 376 64.6
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 1.7e-128 463.4 379 65.2
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 2.8e-128 462.6 377 63.9
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 2.8e-128 462.6 383 63.7
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 8.3e-128 461.1 378 63.8
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 2.0e-126 456.4 355 66.2
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.7e-126 456.1 297 74.1
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 2.7e-126 456.1 295 74.6
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 7.7e-126 454.5 336 66.4
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 1.3e-125 453.8 372 62.6
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 2.9e-125 452.6 358 65.9
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 2.3e-122 443.0 282 75.2
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 6.8e-122 441.4 280 76.4
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 5.7e-121 438.3 363 59.2
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 5.4e-119 431.8 340 61.8
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 3.8e-117 425.6 330 62.7
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 1.5e-116 423.7 280 73.2
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 1.9e-116 423.3 371 60.9
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 3.2e-111 406.0 472 49.4
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 3.3e-108 396.0 232 84.5
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 7.8e-102 374.8 352 56.5
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 8.6e-101 371.3 249 73.5
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 8.3e-96 354.8 267 64.4
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 4.0e-90 335.9 364 49.2
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 4.0e-90 335.9 364 49.2
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 1.5e-89 334.0 206 79.1
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 2.9e-88 329.7 333 49.5
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 1.6e-86 323.9 262 61.1
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 3.5e-86 322.8 275 57.8
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 2.4e-82 310.1 255 59.6
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.7e-56 224.2 192 57.8
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 5.0e-48 196.1 162 61.1
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 9.4e-47 191.8 175 59.4
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 2.5e-39 167.2 125 70.4
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 4.4e-36 156.4 189 42.9
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 1.2e-33 148.3 150 54.7
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 1.9e-31 141.0 138 56.5
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 6.3e-27 125.9 85 72.9
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 1.3e-24 118.2 96 51.0
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 4.8e-19 99.8 133 44.4
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 7.0e-18 95.9 86 59.3
A07p29310 Brassica napus HOM05D006971 ORTHO05D041645 2.1e-06 57.8 48 62.5
BraA07t30570Z Brassica rapa HOM05D006971 ORTHO05D041645 2.1e-06 57.8 48 62.5


User provided reference genes

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