Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_28085 Corchorus olitorius HOM05D005613 ORTHO05D006903 2.3e-139 498.8 242 100.0
Thecc.03G126700 Theobroma cacao HOM05D005613 ORTHO05D006903 8.6e-126 453.8 233 93.6
Gohir.A07G051800 Gossypium hirsutum HOM05D005613 ORTHO05D006903 1.4e-120 436.4 231 90.0
Gohir.D07G056300 Gossypium hirsutum HOM05D005613 ORTHO05D006903 7.0e-120 434.1 231 89.6
Gorai.001G059700 Gossypium raimondii HOM05D005613 ORTHO05D006903 7.0e-120 434.1 231 89.6
Duzib205G1234 Durio zibethinus HOM05D005613 ORTHO05D006903 5.9e-119 431.0 233 88.0
Potri.015G093500 Populus trichocarpa HOM05D005613 ORTHO05D006903 3.5e-111 405.2 222 85.1
arahy.Tifrunner.gnm1.ann1.LN4RIT Arachis hypogaea HOM05D005613 ORTHO05D006903 1.3e-110 403.3 224 85.3
Glyma.06G171500 Glycine max HOM05D005613 ORTHO05D006903 1.3e-110 403.3 224 84.4
Manes.14G052800 Manihot esculenta HOM05D005613 ORTHO05D006903 2.3e-110 402.5 223 84.8
Dinv11157 Davidia involucrata HOM05D005613 ORTHO05D006903 3.0e-110 402.1 222 83.3
Manes.06G118100 Manihot esculenta HOM05D005613 ORTHO05D006903 1.5e-109 399.8 223 83.9
PGR044G0561 Punica granatum HOM05D005613 ORTHO05D006903 1.9e-109 399.4 222 83.8
Ciclev10021465m.g Citrus clementina HOM05D005613 ORTHO05D006903 5.6e-109 397.9 223 83.4
TWI39G1237 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 5.6e-109 397.9 223 83.0
CSS0000406 Camellia sinensis var. sinensis HOM05D005613 ORTHO05D006903 7.3e-109 397.5 222 84.2
CANSAT80G2472 Cannabis sativa HOM05D005613 ORTHO05D006903 7.3e-109 397.5 222 82.9
Glyma.04G194500 Glycine max HOM05D005613 ORTHO05D006903 7.3e-109 397.5 224 83.0
MD06G1143700 Malus domestica HOM05D005613 ORTHO05D006903 9.5e-109 397.1 222 83.3
RcHm_v2.0_Chr7g0190451 Rosa chinensis HOM05D005613 ORTHO05D006903 9.5e-109 397.1 224 82.1
TWI23G0755 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 9.5e-109 397.1 223 83.0
TAR371G0420 Trochodendron aralioides HOM05D005613 ORTHO05D006903 1.2e-108 396.7 220 84.1
Actinidia25589 Actinidia chinensis HOM05D005613 ORTHO05D006903 1.6e-108 396.4 221 83.3
Actinidia15836 Actinidia chinensis HOM05D005613 ORTHO05D006903 2.8e-108 395.6 221 82.4
Phvul.009G167500 Phaseolus vulgaris HOM05D005613 ORTHO05D006903 2.8e-108 395.6 224 83.0
CiPaw.11G009100 Carya illinoinensis HOM05D005613 ORTHO05D006903 8.0e-108 394.0 223 83.9
Medtr3g089010 Medicago truncatula HOM05D005613 ORTHO05D006903 8.0e-108 394.0 224 81.7
Eucgr.K02737 Eucalyptus grandis HOM05D005613 ORTHO05D006903 1.1e-107 393.7 222 82.9
Prupe.5G152900 Prunus persica HOM05D005613 ORTHO05D006903 1.1e-107 393.7 221 83.7
MD14G1159000 Malus domestica HOM05D005613 ORTHO05D006903 1.4e-107 393.3 222 82.9
Lj1g0013310 Lotus japonicus HOM05D005613 ORTHO05D006903 1.8e-107 392.9 224 82.6
MELO3C002354.2 Cucumis melo HOM05D005613 ORTHO05D006903 3.1e-107 392.1 224 83.5
CsaV3_1G009570 Cucumis sativus L. HOM05D005613 ORTHO05D006903 3.1e-107 392.1 224 83.5
Lalb_Chr11g0069651 Lupinus albus HOM05D005613 ORTHO05D006903 3.1e-107 392.1 223 82.5
Cc07_g17610 Coffea canephora HOM05D005613 ORTHO05D006903 6.8e-107 391.0 219 82.6
MSTRG.17588 Avicennia marina HOM05D005613 ORTHO05D006903 8.9e-107 390.6 222 81.1
Hund02427 Selenicereus undatus HOM05D005613 ORTHO05D006903 8.9e-107 390.6 223 81.2
THA.LOC104803145 Tarenaya hassleriana HOM05D005613 ORTHO05D006903 8.9e-107 390.6 222 81.1
CAN.G767.35 Capsicum annuum HOM05D005613 ORTHO05D006903 1.5e-106 389.8 219 80.8
Aqoxy5G04126 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 2.0e-106 389.4 225 81.3
FvH4_5g07950 Fragaria vesca HOM05D005613 ORTHO05D006903 5.8e-106 387.9 221 81.0
Psat5g169720 Pisum sativum HOM05D005613 ORTHO05D006903 7.5e-106 387.5 224 80.4
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea HOM05D005613 ORTHO05D006903 1.7e-105 386.3 245 77.1
Haze_07235 Corylus avellana HOM05D005613 ORTHO05D006903 8.3e-105 384.0 258 73.3
EL10Ac5g11023 Beta vulgaris HOM05D005613 ORTHO05D006903 1.1e-104 383.6 219 81.7
PSO017G3077 Papaver somniferum HOM05D005613 ORTHO05D006903 1.1e-104 383.6 220 83.6
Cc00_g03610 Coffea canephora HOM05D005613 ORTHO05D006903 1.4e-104 383.3 221 81.9
GSVIVG01008514001 Vitis vinifera HOM05D005613 ORTHO05D006903 1.4e-104 383.3 221 82.4
QL10p004130 Quercus lobata HOM05D005613 ORTHO05D006903 1.9e-104 382.9 227 81.1
ECA232G4063 Erigeron canadensis HOM05D005613 ORTHO05D006903 2.4e-104 382.5 223 80.3
QL10p004191 Quercus lobata HOM05D005613 ORTHO05D006903 2.4e-104 382.5 227 81.1
PSO017G2706 Papaver somniferum HOM05D005613 ORTHO05D006903 3.2e-104 382.1 218 83.9
PSO675G0985 Papaver somniferum HOM05D005613 ORTHO05D006903 4.1e-104 381.7 218 83.9
Solyc12g098640.3 Solanum lycopersicum HOM05D005613 ORTHO05D006903 4.1e-104 381.7 219 79.0
Sopen12g033400 Solanum pennellii HOM05D005613 ORTHO05D006903 4.1e-104 381.7 219 79.0
PGSC0003DMG400004674 Solanum tuberosum HOM05D005613 ORTHO05D006903 4.1e-104 381.7 219 79.5
TPR.G26132 Trifolium pratense HOM05D005613 ORTHO05D006903 9.2e-104 380.6 250 73.6
PSO478G0845 Papaver somniferum HOM05D005613 ORTHO05D006903 1.2e-103 380.2 218 83.5
AUR62032039 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.6e-103 379.8 223 80.3
Sed0021273 Sechium edule HOM05D005613 ORTHO05D006903 2.1e-103 379.4 218 83.0
VMungo1309G0937 Vigna mungo HOM05D005613 ORTHO05D006903 3.5e-103 378.6 212 84.4
HanXRQChr09g0273061 Helianthus annuus HOM05D005613 ORTHO05D006903 6.0e-103 377.9 223 78.9
Peaxi162Scf00378g00519 Petunia axillaris HOM05D005613 ORTHO05D006903 6.0e-103 377.9 219 79.0
BcaC01g04807 Brassica carinata HOM05D005613 ORTHO05D006903 7.8e-103 377.5 219 79.9
BcaB01g02892 Brassica carinata HOM05D005613 ORTHO05D006903 3.9e-102 375.2 219 79.5
CARHR258110 Cardamine hirsuta HOM05D005613 ORTHO05D006903 5.1e-102 374.8 219 79.5
Nitab4.5_0007541g0020 Nicotiana tabacum HOM05D005613 ORTHO05D006903 6.6e-102 374.4 219 78.1
Nitab4.5_0011040g0030 Nicotiana tabacum HOM05D005613 ORTHO05D006903 6.6e-102 374.4 219 78.1
C03p33570 Brassica napus HOM05D005613 ORTHO05D006903 1.1e-101 373.6 221 79.6
Aa31LG3G6910 Aethionema arabicum HOM05D005613 ORTHO05D006903 1.5e-101 373.2 221 80.1
AL8G24500 Arabidopsis lyrata HOM05D005613 ORTHO05D006903 2.5e-101 372.5 219 79.0
AT5G50375 Arabidopsis thaliana HOM05D005613 ORTHO05D006903 3.3e-101 372.1 219 79.0
AUR62036512 Chenopodium quinoa HOM05D005613 ORTHO05D006903 3.3e-101 372.1 219 79.9
BolC3t15677H Brassica oleracea HOM05D005613 ORTHO05D006903 5.6e-101 371.3 227 77.5
Carub.0008s1047 Capsella rubella HOM05D005613 ORTHO05D006903 5.6e-101 371.3 219 78.1
ClCG03G003690 Citrullus lanatus HOM05D005613 ORTHO05D006903 7.3e-101 370.9 267 70.0
Thhalv10014300m.g Eutrema salsugineum HOM05D005613 ORTHO05D006903 7.3e-101 370.9 219 79.0
A03p27830 Brassica napus HOM05D005613 ORTHO05D006903 9.5e-101 370.5 226 77.4
Sed0001462 Sechium edule HOM05D005613 ORTHO05D006903 1.6e-100 369.8 221 81.0
BraA03t11994Z Brassica rapa HOM05D005613 ORTHO05D006903 2.1e-100 369.4 232 75.4
Migut.N02308 Erythranthe guttata HOM05D005613 ORTHO05D006903 3.6e-100 368.6 222 77.5
SalBow7G2516 Salvia bowleyana HOM05D005613 ORTHO05D006903 8.1e-100 367.5 224 77.7
SpUn0050_0040 Schrenkiella parvula HOM05D005613 ORTHO05D006903 8.1e-100 367.5 219 78.5
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea HOM05D005613 ORTHO05D006903 2.3e-99 365.9 224 79.9
Lsat_1_v5_gn_4_76740 Lactuca sativa HOM05D005613 ORTHO05D006903 3.1e-99 365.5 223 77.6
FAN13G2894 Fragaria x ananassa HOM05D005613 ORTHO05D006903 6.8e-99 364.4 224 75.4
Lj9C477T8 Lonicera japonica HOM05D005613 ORTHO05D006903 3.4e-98 362.1 221 78.3
Aqoxy22s001 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 2.2e-97 359.4 204 82.8
Rhsim08G0188600 Rhododendron simsii HOM05D005613 ORTHO05D006903 3.7e-97 358.6 207 83.1
Zm00001eb265520 Zea mays HOM05D005613 ORTHO05D006903 3.7e-97 358.6 217 79.7
Sabra15G0115100 Salix brachista HOM05D005613 ORTHO05D006903 2.4e-96 355.9 237 74.3
Nn4g22373 Nelumbo nucifera HOM05D005613 ORTHO05D006903 4.1e-96 355.1 206 80.1
SpUn0508_0010 Schrenkiella parvula HOM05D005613 ORTHO05D006903 5.4e-96 354.8 211 79.1
A09p55960 Brassica napus HOM05D005613 ORTHO05D006903 4.6e-95 351.7 221 74.7
BraA09t40998Z Brassica rapa HOM05D005613 ORTHO05D006903 4.6e-95 351.7 221 74.7
CiPaw.12G041000 Carya illinoinensis HOM05D005613 ORTHO05D006903 1.7e-94 349.7 196 83.2
SEGI_09495 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 3.0e-94 349.0 218 73.4
CDE02G3999 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 3.9e-94 348.6 220 74.5
vmacro19214 Vaccinium macrocarpon HOM05D005613 ORTHO05D006903 5.1e-94 348.2 195 83.6
FAN18G4059 Fragaria x ananassa HOM05D005613 ORTHO05D006903 8.6e-94 347.4 261 65.5
DCAR_016405 Daucus carota HOM05D005613 ORTHO05D006903 1.1e-93 347.1 221 74.2
unitig_27.g24986 Utricularia gibba HOM05D005613 ORTHO05D006903 1.5e-93 346.7 218 73.4
BcaB08g35134 Brassica carinata HOM05D005613 ORTHO05D006903 1.9e-93 346.3 219 74.0
BolC8t51467H Brassica oleracea HOM05D005613 ORTHO05D006903 7.3e-93 344.4 219 73.1
C08p38940 Brassica napus HOM05D005613 ORTHO05D006903 2.1e-92 342.8 219 72.6
ATR0680G053 Amborella trichopoda HOM05D005613 ORTHO05D006903 2.8e-92 342.4 215 73.5
DCAR_021614 Daucus carota HOM05D005613 ORTHO05D006903 1.4e-91 340.1 220 71.8
Dinv04871 Davidia involucrata HOM05D005613 ORTHO05D006903 9.3e-88 327.4 223 72.6
FAN08G1682 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.2e-87 327.0 252 65.5
CDE09G1331 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 1.7e-86 323.2 207 74.4
BcaC07g40897 Brassica carinata HOM05D005613 ORTHO05D006903 2.5e-85 319.3 223 67.7
SHI39270 Sapria himalayana HOM05D005613 ORTHO05D006903 4.3e-85 318.5 189 78.3
SHI42710 Sapria himalayana HOM05D005613 ORTHO05D006903 4.3e-85 318.5 189 78.3
unitig_699.g19129 Utricularia gibba HOM05D005613 ORTHO05D006903 9.9e-82 307.4 219 67.6
AUR62032713 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.3e-78 297.0 220 70.5
BcaB05g24059 Brassica carinata HOM05D005613 ORTHO05D006903 9.6e-77 290.8 230 64.3
Cpa.g.sc13.142 Carica papaya HOM05D005613 ORTHO05D006903 4.8e-76 288.5 161 84.5
SMO180G0005 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 6.2e-76 288.1 222 59.5
AagrBONN_evm.TU.Sc2ySwM_362.2466 Anthoceros agrestis HOM05D005613 ORTHO05D006903 4.5e-74 282.0 221 61.1
Aqoxy1G01617 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 5.8e-74 281.6 162 82.1
Mapoly0019s0004 Marchantia polymorpha HOM05D005613 ORTHO05D006903 1.6e-68 263.5 221 56.6
Pp3c14_22450 Physcomitrium patens HOM05D005613 ORTHO05D006903 6.2e-68 261.5 230 55.2
HPP92_006202 Vanilla planifolia HOM05D005613 ORTHO05D006903 2.5e-64 249.6 156 78.2
SGA_v2.0_scaffold115G32075 Striga asiatica HOM05D005613 ORTHO05D006903 3.5e-63 245.7 155 72.3
Cre16.g657300 Chlamydomonas reinhardtii HOM05D005613 ORTHO05D006903 3.7e-60 235.7 220 55.0
CBR_g48821 Chara braunii HOM05D005613 ORTHO05D006903 1.0e-57 227.6 212 50.9
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 9.3e-56 221.1 131 80.2
SGA_v2.0_scaffold115G32072 Striga asiatica HOM05D000001 ORTHO05D000003 7.9e-47 191.4 187 51.3
SGA_v2.0_scaffold42G16110 Striga asiatica HOM05D005613 ORTHO05D006903 2.4e-43 179.9 243 44.4
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis HOM05D005613 ORTHO05D006903 2.0e-37 160.2 130 56.9
MCO03G530 Micromonas commoda HOM05D005613 ORTHO05D006903 4.4e-37 159.1 163 48.5
SMO353G0009 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 2.8e-36 156.4 181 47.5
PRCOL_00007276 Prasinoderma coloniale HOM05D005613 ORTHO05D006903 9.1e-35 151.4 229 40.6
HPP92_006201 Vanilla planifolia HOM05D005613 ORTHO05D006903 5.9e-10 68.9 43 67.4
arahy.Tifrunner.gnm1.ann1.W1BQBA Arachis hypogaea HOM05D005613 ORTHO05D006903 2.1e-07 60.5 29 86.2


User provided reference genes

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