Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 2.9e-137 491.9 250 100.0
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 3.9e-113 411.8 286 77.3
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 1.7e-105 386.3 292 74.3
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 5.6e-104 381.3 292 71.9
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 4.7e-103 378.3 292 70.9
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 2.4e-99 365.9 285 70.5
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 1.4e-83 313.5 292 62.7
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 3.2e-83 312.4 306 61.1
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 5.4e-83 311.6 297 61.6
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 7.1e-83 311.2 291 60.1
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 9.3e-83 310.8 291 60.1
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 2.1e-82 309.7 289 59.9
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 3.5e-82 308.9 291 64.3
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 2.3e-81 306.2 286 59.1
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 3.0e-81 305.8 295 62.4
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 8.7e-81 304.3 288 59.0
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 1.5e-80 303.5 294 60.2
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 9.6e-80 300.8 291 60.5
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 1.6e-79 300.1 315 58.1
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 1.6e-79 300.1 284 62.3
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 3.6e-79 298.9 301 59.8
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 3.6e-79 298.9 287 61.3
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 4.8e-79 298.5 285 60.7
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 8.1e-79 297.7 254 63.8
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 6.9e-78 294.7 255 63.1
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 1.5e-77 293.5 285 59.6
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 1.5e-77 293.5 286 60.1
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 1.5e-77 293.5 257 63.8
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 4.5e-77 292.0 286 60.1
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 4.5e-77 292.0 286 59.8
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 9.9e-77 290.8 286 56.6
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 2.2e-76 289.7 258 62.0
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 3.8e-76 288.9 278 59.4
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 4.9e-76 288.5 273 60.8
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 6.4e-76 288.1 287 60.3
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 6.4e-76 288.1 283 60.4
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 8.4e-76 287.7 286 57.3
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 1.4e-75 287.0 289 59.9
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 1.4e-75 287.0 279 58.4
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 1.4e-75 287.0 284 57.7
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 5.4e-75 285.0 281 60.5
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 1.6e-74 283.5 156 89.1
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 3.5e-74 282.3 281 59.8
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 4.6e-74 282.0 159 84.9
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 6.0e-74 281.6 286 56.6
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 2.3e-73 279.6 289 58.1
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 6.7e-73 278.1 295 58.3
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 6.7e-73 278.1 288 58.7
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 1.1e-72 277.3 277 59.2
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 1.9e-72 276.6 288 58.0
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 3.3e-72 275.8 284 56.7
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 7.4e-72 274.6 265 58.9
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 3.6e-71 272.3 323 50.8
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 8.1e-71 271.2 286 55.9
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 1.8e-70 270.0 273 58.6
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 1.8e-70 270.0 275 56.7
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 9.0e-70 267.7 288 56.6
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 2.0e-69 266.5 280 56.1
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 2.6e-69 266.2 284 56.7
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 2.6e-69 266.2 280 58.9
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 4.5e-69 265.4 275 57.1
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 2.9e-68 262.7 276 56.2
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 3.8e-68 262.3 159 81.1
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 1.4e-67 260.4 300 55.7
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 3.2e-67 259.2 302 50.7
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 7.1e-67 258.1 256 60.5
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 1.2e-66 257.3 297 55.6
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.6e-66 256.9 154 79.9
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 4.6e-66 255.4 286 54.2
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 7.9e-66 254.6 286 55.6
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 3.9e-65 252.3 286 52.1
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 1.5e-64 250.4 216 63.4
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 1.5e-64 250.4 352 46.3
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 5.6e-64 248.4 296 53.4
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 9.6e-64 247.7 290 52.8
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 2.1e-63 246.5 224 59.8
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 4.8e-63 245.4 278 56.5
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 2.4e-62 243.0 310 49.7
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 3.1e-62 242.7 284 52.8
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 9.0e-62 241.1 289 52.2
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 1.5e-61 240.4 286 53.1
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 2.6e-61 239.6 289 53.6
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 1.1e-59 234.2 287 50.5
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 1.9e-59 233.4 175 67.4
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 6.0e-58 228.4 263 52.1
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 1.3e-57 227.3 325 45.5
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 1.8e-57 226.9 154 74.7
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 5.1e-57 225.3 251 52.2
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 5.1e-57 225.3 131 86.3
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 5.1e-57 225.3 156 71.8
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 6.7e-57 224.9 197 61.9
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 1.1e-56 224.2 210 56.7
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 3.7e-55 219.2 305 46.2
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 6.3e-55 218.4 245 52.7
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 6.9e-54 214.9 280 48.2
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 3.8e-52 209.1 133 80.5
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 7.4e-48 194.9 235 51.9
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 4.8e-47 192.2 256 48.8
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 1.4e-46 190.7 156 64.7
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 1.2e-45 187.6 181 55.2
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 3.4e-45 186.0 250 50.0
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 1.8e-38 163.7 210 47.1
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 9.1e-38 161.4 198 49.5
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 8.8e-33 144.8 199 47.2
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 1.8e-30 137.1 79 81.0
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 3.2e-27 126.3 80 72.5
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 9.4e-27 124.8 96 65.6
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 3.3e-24 116.3 75 76.0
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 2.7e-21 106.7 177 45.8
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 5.0e-20 102.4 108 52.8
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 2.8e-15 86.7 109 47.7
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 5.0e-12 75.9 256 32.8
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.9e-11 73.9 61 60.7
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 2.1e-10 70.5 183 30.6
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 1.4e-09 67.8 225 30.7


User provided reference genes

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