Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 5.1e-76 287.7 152 100.0
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 1.5e-72 276.2 152 93.4
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 2.7e-69 265.4 152 88.2
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 6.0e-69 264.2 152 87.5
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 1.0e-68 263.5 152 88.2
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 3.1e-65 251.9 152 84.9
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 5.3e-65 251.1 151 82.1
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 4.5e-64 248.1 151 82.1
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 4.5e-64 248.1 152 80.9
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 1.0e-63 246.9 152 80.3
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 1.7e-63 246.1 152 80.3
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 1.7e-63 246.1 152 81.6
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 2.2e-63 245.7 152 82.2
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 3.8e-63 245.0 148 85.8
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 6.5e-63 244.2 152 80.9
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 8.5e-63 243.8 152 81.6
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 1.4e-62 243.0 152 79.6
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 1.9e-62 242.7 152 82.2
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 4.2e-62 241.5 152 80.3
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 7.2e-62 240.7 152 82.2
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 9.3e-62 240.4 151 80.1
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 1.2e-61 240.0 153 81.7
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 1.6e-61 239.6 143 83.9
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 1.6e-61 239.6 152 78.3
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 1.6e-61 239.6 152 78.3
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 2.1e-61 239.2 151 79.5
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 4.6e-61 238.0 152 80.3
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 6.1e-61 237.7 152 78.3
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 7.9e-61 237.3 153 80.4
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 1.3e-60 236.5 152 79.6
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 2.3e-60 235.7 152 78.3
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 2.3e-60 235.7 152 79.6
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 3.0e-60 235.3 145 82.1
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 6.7e-60 234.2 143 81.8
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 6.7e-60 234.2 152 78.9
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 8.7e-60 233.8 144 81.2
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 1.1e-59 233.4 152 81.6
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 1.5e-59 233.0 152 77.6
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 7.4e-59 230.7 144 77.8
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 1.3e-58 229.9 143 81.1
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 1.6e-58 229.6 144 75.7
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 6.3e-58 227.6 143 77.6
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 6.3e-58 227.6 141 79.4
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 8.2e-58 227.3 143 76.9
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 8.2e-58 227.3 143 78.3
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 1.1e-57 226.9 141 79.4
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 1.1e-57 226.9 152 77.6
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 1.4e-57 226.5 140 81.4
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 2.4e-57 225.7 141 78.0
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 4.1e-57 224.9 143 78.3
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 6.9e-57 224.2 152 74.3
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 1.5e-56 223.0 142 78.9
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 2.6e-56 222.2 146 75.3
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 3.4e-56 221.9 161 72.7
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 5.9e-56 221.1 151 74.8
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 1.3e-55 219.9 140 77.9
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 1.7e-55 219.5 141 78.0
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 2.2e-55 219.2 141 77.3
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 2.9e-55 218.8 159 71.7
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 2.9e-55 218.8 152 70.4
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 6.5e-55 217.6 142 76.8
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 5.5e-54 214.5 151 72.2
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.2e-53 213.4 140 73.6
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.2e-53 213.4 140 73.6
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 1.6e-53 213.0 153 73.2
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 4.6e-53 211.5 142 73.2
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 1.0e-52 210.3 131 80.9
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 3.9e-52 208.4 143 74.8
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 2.0e-51 206.1 137 75.9
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 5.7e-51 204.5 143 73.4
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 2.8e-50 202.2 129 79.8
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 4.8e-50 201.4 157 68.2
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 8.2e-50 200.7 190 60.0
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 1.1e-49 200.3 143 72.0
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 1.1e-49 200.3 152 68.4
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 1.8e-49 199.5 130 76.9
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 4.5e-48 194.9 139 71.9
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 2.2e-47 192.6 148 69.6
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 2.9e-47 192.2 111 86.5
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 4.2e-46 188.3 142 66.9
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 1.4e-44 183.3 132 75.0
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 3.0e-44 182.2 140 66.4
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 9.7e-43 177.2 111 74.8
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 8.2e-42 174.1 156 59.6
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 1.4e-41 173.3 152 57.9
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 2.4e-41 172.6 141 61.7
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 4.1e-41 171.8 109 77.1
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 9.1e-41 170.6 145 60.7
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 3.8e-39 165.2 149 57.0
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 6.5e-39 164.5 126 67.5
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 1.9e-38 162.9 133 62.4
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 5.5e-38 161.4 152 54.6
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 1.6e-37 159.8 149 55.0
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 2.1e-37 159.5 143 56.6
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 2.1e-37 159.5 149 55.0
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 2.7e-37 159.1 143 56.6
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 3.6e-37 158.7 143 56.6
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 3.6e-37 158.7 116 70.7
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 4.7e-37 158.3 149 54.4
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 1.0e-36 157.1 149 53.7
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 1.0e-36 157.1 149 53.7
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 1.0e-36 157.1 141 61.7
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 5.2e-36 154.8 149 53.7
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 5.2e-36 154.8 149 53.7
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 5.2e-36 154.8 143 54.5
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 1.2e-35 153.7 139 54.0
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 1.1e-33 147.1 111 68.5
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 1.1e-33 147.1 116 66.4
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 2.1e-29 132.9 147 55.8
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 2.7e-29 132.5 141 51.1
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 1.0e-28 130.6 77 81.8
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 1.2e-27 127.1 143 50.3
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 1.4e-25 120.2 81 72.8
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 2.8e-21 105.9 65 76.9
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 9.2e-17 90.9 75 61.3
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 1.3e-15 87.0 155 40.6
Sabra10G0124400 Salix brachista HOM05D006937 ORTHO05D008747 1.6e-13 80.1 108 45.4
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 2.3e-12 76.3 61 60.7
Cpa.g.sc1.69 Carica papaya HOM05D006937 ORTHO05D008747 2.6e-11 72.8 42 88.1
COL.COLO4_21409 Corchorus olitorius HOM05D005191 ORTHO05D016248 2.3e-07 59.7 31 96.8
PRCOL_00006274 Prasinoderma coloniale HOM05D006937 ORTHO05D008747 5.0e-07 58.5 147 31.3
Cc00_g19610 Coffea canephora HOM05D000421 ORTHO05D013979 1.9e-06 56.6 34 79.4
Cc08_g04320 Coffea canephora HOM05D006937 ORTHO05D013979 1.9e-06 56.6 34 79.4


User provided reference genes

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