Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 7.7e-92 340.5 176 100.0
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 6.1e-65 251.1 180 75.0
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 1.5e-63 246.5 185 74.6
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 5.7e-63 244.6 183 73.2
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 9.2e-61 237.3 184 71.2
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 1.4e-53 213.4 173 65.9
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 2.4e-53 212.6 169 64.5
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 2.7e-52 209.1 156 68.6
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 5.0e-51 204.9 150 70.7
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 6.6e-51 204.5 131 77.1
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 7.3e-50 201.1 163 66.3
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 9.5e-50 200.7 174 59.8
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 9.5e-50 200.7 133 74.4
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 1.2e-49 200.3 153 69.3
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 1.6e-49 199.9 164 64.0
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 2.8e-49 199.1 157 68.2
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 3.6e-49 198.7 135 71.1
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 4.7e-49 198.4 174 62.6
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 4.7e-49 198.4 133 73.7
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 4.7e-49 198.4 129 79.1
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 6.2e-49 198.0 143 74.8
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 8.0e-49 197.6 155 64.5
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 1.1e-48 197.2 158 66.5
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 2.3e-48 196.1 168 62.5
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 2.3e-48 196.1 173 59.5
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 3.1e-48 195.7 183 62.8
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 3.1e-48 195.7 149 71.8
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 3.1e-48 195.7 137 73.0
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 6.8e-48 194.5 173 62.4
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 2.0e-47 193.0 138 72.5
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 2.0e-47 193.0 127 73.2
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 4.4e-47 191.8 144 68.8
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 5.8e-47 191.4 148 68.2
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 9.8e-47 190.7 176 59.7
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 1.7e-46 189.9 176 58.0
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 1.7e-46 189.9 172 59.9
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 2.2e-46 189.5 172 60.5
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 2.2e-46 189.5 162 62.3
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 2.2e-46 189.5 148 66.9
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 2.9e-46 189.1 176 59.7
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 2.9e-46 189.1 174 62.1
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 3.7e-46 188.7 138 70.3
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 3.7e-46 188.7 138 70.3
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 3.7e-46 188.7 138 70.3
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 4.9e-46 188.3 177 59.3
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 6.4e-46 188.0 140 66.4
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 8.3e-46 187.6 138 69.6
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 8.3e-46 187.6 168 60.7
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 8.3e-46 187.6 131 71.8
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 8.3e-46 187.6 176 57.4
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.1e-45 187.2 130 73.1
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.1e-45 187.2 130 73.1
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 1.1e-45 187.2 138 68.8
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 1.1e-45 187.2 172 60.5
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 1.9e-45 186.4 176 59.7
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 1.9e-45 186.4 146 65.1
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 4.1e-45 185.3 155 63.2
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 5.4e-45 184.9 140 65.0
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 5.4e-45 184.9 162 60.5
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 9.2e-45 184.1 176 59.1
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 1.2e-44 183.7 139 65.5
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 2.0e-44 183.0 132 70.5
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 2.0e-44 183.0 130 72.3
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 2.0e-44 183.0 176 59.1
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 2.7e-44 182.6 171 59.1
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 2.7e-44 182.6 135 68.1
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 2.7e-44 182.6 130 71.5
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 3.5e-44 182.2 163 58.3
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 4.6e-44 181.8 153 62.1
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 4.6e-44 181.8 126 69.8
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 4.6e-44 181.8 152 61.8
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 6.0e-44 181.4 147 64.6
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 7.8e-44 181.0 175 58.9
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 1.0e-43 180.6 191 56.0
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 1.0e-43 180.6 145 64.8
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 3.9e-43 178.7 124 72.6
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 3.9e-43 178.7 131 68.7
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 5.0e-43 178.3 154 61.7
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 6.6e-43 177.9 142 62.7
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 1.5e-42 176.8 158 57.6
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 1.5e-42 176.8 109 78.0
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 2.5e-42 176.0 195 52.3
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 2.5e-42 176.0 104 79.8
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 3.3e-42 175.6 131 67.2
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 3.3e-42 175.6 145 62.8
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 3.3e-42 175.6 145 62.8
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 3.3e-42 175.6 145 62.8
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 3.3e-42 175.6 128 71.9
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 3.3e-42 175.6 175 56.0
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 4.3e-42 175.3 132 66.7
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 4.3e-42 175.3 137 65.0
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 9.5e-42 174.1 123 69.1
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 9.5e-42 174.1 167 55.1
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 8.1e-41 171.0 154 60.4
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 1.1e-40 170.6 123 68.3
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 2.6e-39 166.0 133 65.4
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 7.1e-37 157.9 118 63.6
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 4.6e-36 155.2 121 60.3
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 7.8e-36 154.5 143 65.0
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 6.6e-35 151.4 117 63.2
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 1.1e-34 150.6 121 64.5
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 1.1e-34 150.6 121 64.5
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 1.1e-34 150.6 121 64.5
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 1.3e-30 137.1 106 63.2
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 1.2e-25 120.6 121 48.8
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 3.6e-25 119.0 117 59.0
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 5.2e-24 115.2 94 56.4
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 3.4e-23 112.5 133 43.6
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 2.2e-22 109.8 121 47.9
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 3.8e-22 109.0 124 47.6
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.8e-16 90.1 72 66.7
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 9.0e-16 87.8 99 40.4
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.9e-13 80.1 46 71.7
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 1.4e-08 63.9 106 42.5
Os03g0210700 Oryza sativa ssp. japonica HOM05D006961 ORTHO05D008809 6.4e-06 55.1 65 44.6


User provided reference genes

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