Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_27711 Corchorus olitorius HOM05D007398 ORTHO05D004912 6.2e-61 237.3 120 100.0
Thecc.02G314700 Theobroma cacao HOM05D007398 ORTHO05D004912 1.0e-47 193.4 120 81.7
Duzib251G0280 Durio zibethinus HOM05D007398 ORTHO05D004912 2.8e-45 185.3 120 78.3
Duzib248G0799 Durio zibethinus HOM05D007398 ORTHO05D004912 6.9e-44 180.6 120 76.7
Gorai.008G173500 Gossypium raimondii HOM05D007398 ORTHO05D004912 1.5e-43 179.5 120 77.5
Gohir.A12G157600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 7.7e-43 177.2 120 75.8
Gohir.D12G159800 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.0e-42 176.8 120 76.7
Gohir.A04G144600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 6.1e-40 167.5 120 71.7
Gohir.D04G189100 Gossypium hirsutum HOM05D007398 ORTHO05D004912 3.9e-39 164.9 120 70.8
Gorai.012G184400 Gossypium raimondii HOM05D007398 ORTHO05D004912 1.7e-37 159.5 120 70.0
RcHm_v2.0_Chr2g0159281 Rosa chinensis HOM05D007398 ORTHO05D004912 5.3e-28 127.9 123 53.7
FvH4_6g43180 Fragaria vesca HOM05D007398 ORTHO05D004912 4.5e-27 124.8 124 53.2
FAN02G4350 Fragaria x ananassa HOM05D007398 ORTHO05D004912 4.5e-27 124.8 124 52.4
FAN10G4171 Fragaria x ananassa HOM05D007398 ORTHO05D004912 4.5e-27 124.8 124 53.2
FAN05G1963 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.7e-26 122.9 124 52.4
FAN14G0586 Fragaria x ananassa HOM05D007398 ORTHO05D004912 2.2e-26 122.5 124 53.2
Prupe.3G217200 Prunus persica HOM05D007398 ORTHO05D004912 2.2e-26 122.5 124 53.2
Ciclev10017196m.g Citrus clementina HOM05D007398 ORTHO05D004912 2.9e-26 122.1 121 57.0
CANSAT64G0797 Cannabis sativa HOM05D007398 ORTHO05D004912 8.5e-26 120.6 123 55.3
Atru.chr6.3184 Acer truncatum HOM05D007398 ORTHO05D004912 9.4e-25 117.1 128 53.1
Atru.chr6.3183 Acer truncatum HOM05D007398 ORTHO05D004912 1.2e-24 116.7 128 53.1
FAN09G1954 Fragaria x ananassa HOM05D007398 ORTHO05D004912 2.1e-24 115.9 124 50.0
MD17G1096900 Malus domestica HOM05D007398 ORTHO05D004912 6.1e-24 114.4 124 50.8
MD09G1108900 Malus domestica HOM05D007398 ORTHO05D004912 2.6e-22 109.0 123 47.2
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 9.7e-22 107.1 135 49.6
TWI75G1275 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 1.3e-21 106.7 124 50.8
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 3.7e-21 105.1 139 45.3
Actinidia30523 Actinidia chinensis HOM05D007398 ORTHO05D004912 1.8e-20 102.8 122 49.2
TAR626G0532 Trochodendron aralioides HOM05D007398 ORTHO05D004912 4.1e-20 101.7 132 45.5
TWI18G0787 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 9.1e-20 100.5 127 47.2
Hma1.2p1_0328F.1_g126925 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 1.6e-19 99.8 130 47.7
Hma1.2p1_0328F.1_g126930 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 1.6e-19 99.8 130 47.7
CSS0017183 Camellia sinensis var. sinensis HOM05D007398 ORTHO05D004912 2.0e-19 99.4 124 46.8
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 4.5e-19 98.2 138 48.6
Glyma.13G308800 Glycine max HOM05D007398 ORTHO05D004912 1.0e-18 97.1 124 53.2
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 1.3e-18 96.7 137 47.4
TAR627G0987 Trochodendron aralioides HOM05D007398 ORTHO05D004912 8.5e-18 94.0 132 45.5
Nn1g03511 Nelumbo nucifera HOM05D007398 ORTHO05D004912 1.5e-17 93.2 127 45.7
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 1.9e-17 92.8 106 51.9
Manes.13G070200 Manihot esculenta HOM05D007398 ORTHO05D004912 4.2e-17 91.7 90 56.7
TAR629G1636 Trochodendron aralioides HOM05D007398 ORTHO05D004912 5.5e-17 91.3 132 44.7
arahy.Tifrunner.gnm1.ann1.TIC55L Arachis hypogaea HOM05D007398 ORTHO05D004912 9.4e-17 90.5 134 45.5
Eucgr.K00797 Eucalyptus grandis HOM05D007398 ORTHO05D004912 9.4e-17 90.5 121 48.8
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 1.6e-16 89.7 125 46.4
Phvul.005G115200 Phaseolus vulgaris HOM05D007398 ORTHO05D004912 3.6e-16 88.6 129 48.1
Cc05_g04620 Coffea canephora HOM05D007398 ORTHO05D004912 4.7e-16 88.2 118 51.7
Glyma.12G193700 Glycine max HOM05D007398 ORTHO05D004912 4.7e-16 88.2 126 50.0
Rhsim06G0162600 Rhododendron simsii HOM05D007398 ORTHO05D004912 6.1e-16 87.8 118 44.9
Dinv39711 Davidia involucrata HOM05D007398 ORTHO05D004912 1.0e-15 87.0 125 46.4
Medtr2g088320 Medicago truncatula HOM05D007398 ORTHO05D004912 1.0e-15 87.0 116 47.4
VMungo1080G0246 Vigna mungo HOM05D007398 ORTHO05D004912 1.0e-15 87.0 124 49.2
Sed0017095 Sechium edule HOM05D007398 ORTHO05D004912 1.4e-15 86.7 128 43.8
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 3.0e-15 85.5 107 48.6
arahy.Tifrunner.gnm1.ann1.X0QM4L Arachis hypogaea HOM05D007398 ORTHO05D004912 8.8e-15 84.0 134 44.8
TPR.G4189 Trifolium pratense HOM05D007398 ORTHO05D004912 8.8e-15 84.0 102 50.0
Lalb_Chr19g0135871 Lupinus albus HOM05D007398 ORTHO05D004912 1.5e-14 83.2 116 46.6
Oeu041920.1 Olea europaea HOM05D007398 ORTHO05D004912 2.0e-14 82.8 125 44.0
Psat5g264000 Pisum sativum HOM05D007398 ORTHO05D004912 5.7e-14 81.3 112 47.3
ClCG00G003290 Citrullus lanatus HOM05D007398 ORTHO05D004912 7.5e-14 80.9 127 43.3
ClCG02G001930 Citrullus lanatus HOM05D007398 ORTHO05D004912 7.5e-14 80.9 127 43.3
Sed0010410 Sechium edule HOM05D007398 ORTHO05D004912 9.8e-14 80.5 129 44.2
Lsat_1_v5_gn_7_92201 Lactuca sativa HOM05D007398 ORTHO05D004912 2.2e-13 79.3 143 40.6
ECA236G3422 Erigeron canadensis HOM05D007398 ORTHO05D004912 3.7e-13 78.6 129 41.1
Sed0017131 Sechium edule HOM05D007398 ORTHO05D004912 4.8e-13 78.2 125 47.2
HanXRQChr03g0069481 Helianthus annuus HOM05D007398 ORTHO05D004912 8.3e-13 77.4 128 41.4
Lalb_Chr24g0393181 Lupinus albus HOM05D007398 ORTHO05D004912 1.8e-12 76.3 117 46.2
MELO3C018817.2 Cucumis melo HOM05D007398 ORTHO05D004912 7.0e-12 74.3 122 42.6
CsaV3_7G003580 Cucumis sativus L. HOM05D007398 ORTHO05D004912 9.1e-12 73.9 121 42.1
Manes.15G071300 Manihot esculenta HOM05D007398 ORTHO05D004912 4.5e-11 71.6 98 44.9
CDE01G0169 Ceratophyllum demersum HOM05D001264 ORTHO05D001167 1.3e-10 70.1 125 40.8
ClCG02G008700 Citrullus lanatus HOM05D007398 ORTHO05D004912 1.3e-10 70.1 129 40.3
Manes.03G130000 Manihot esculenta HOM05D007398 ORTHO05D004912 5.0e-10 68.2 100 40.0
PSO541G0095 Papaver somniferum HOM05D007398 ORTHO05D004912 8.6e-10 67.4 113 38.9
MBI02_g21879_MAGBIO Magnolia biondii HOM05D007398 ORTHO05D004912 1.1e-09 67.0 102 41.2
VMungo0647G2151 Vigna mungo HOM05D011727 ORTHO05D004912 1.5e-09 66.6 82 41.5
BcaC01g06332 Brassica carinata HOM05D009587 ORTHO05D004912 2.5e-09 65.9 104 35.6
Thecc.07G035100 Theobroma cacao HOM05D007398 ORTHO05D004912 2.5e-09 65.9 94 45.7
BraA03t10733Z Brassica rapa HOM05D009587 ORTHO05D004912 5.5e-09 64.7 99 35.4
Aqoxy1G02145 Aquilegia oxysepala HOM05D007398 ORTHO05D004912 7.2e-09 64.3 130 37.7
Zm00001eb273730 Zea mays HOM05D007398 ORTHO05D004912 7.2e-09 64.3 105 42.9
Lsat_1_v5_gn_9_106500 Lactuca sativa HOM05D007398 ORTHO05D004912 9.5e-09 63.9 140 37.9
Cpa.g.sc12.298 Carica papaya HOM05D007398 ORTHO05D004912 1.2e-08 63.5 116 38.8
Migut.H01572 Erythranthe guttata HOM05D011575 ORTHO05D004912 1.2e-08 63.5 113 42.5
Duzib213G1052 Durio zibethinus HOM05D007398 ORTHO05D004912 2.1e-08 62.8 95 46.3
HanXRQChr16g0504931 Helianthus annuus HOM05D007398 ORTHO05D004912 2.1e-08 62.8 109 45.9
A03p14360 Brassica napus HOM05D009587 ORTHO05D004912 2.8e-08 62.4 117 35.0
Glyma.14G163600 Glycine max HOM05D011727 ORTHO05D004912 2.8e-08 62.4 95 41.1
Migut.M01320 Erythranthe guttata HOM05D011575 ORTHO05D004912 4.7e-08 61.6 110 40.9
QL05p073125 Quercus lobata HOM05D007398 ORTHO05D004912 4.7e-08 61.6 90 44.4
MSTRG.7209 Avicennia marina HOM05D011575 ORTHO05D004912 6.1e-08 61.2 98 41.8
QL05p073115 Quercus lobata HOM05D007398 ORTHO05D004912 6.1e-08 61.2 88 44.3
Sed0025347 Sechium edule HOM05D007398 ORTHO05D004912 8.0e-08 60.8 129 38.0
unitig_744.g24521 Utricularia gibba HOM05D011575 ORTHO05D004912 8.0e-08 60.8 80 45.0
Gohir.D01G067500 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.4e-07 60.1 99 44.4
Gorai.002G089400 Gossypium raimondii HOM05D007398 ORTHO05D004912 1.4e-07 60.1 99 44.4
AT4G26960 Arabidopsis thaliana HOM05D009587 ORTHO05D004912 1.8e-07 59.7 108 35.2
Lj1g0009560 Lotus japonicus HOM05D011727 ORTHO05D004912 1.8e-07 59.7 77 49.4
Gohir.A01G080300 Gossypium hirsutum HOM05D007398 ORTHO05D004912 2.3e-07 59.3 99 44.4
Glyma.13G082350 Glycine max HOM05D011727 ORTHO05D004912 3.0e-07 58.9 85 38.8
THA.LOC104813425 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 3.0e-07 58.9 105 36.2
Sc16g0005970 Simmondsia chinensis HOM05D007398 ORTHO05D004912 4.0e-07 58.5 83 42.2
C03p16740 Brassica napus HOM05D009587 ORTHO05D004912 5.2e-07 58.2 102 35.3
Thhalv10015018m.g Eutrema salsugineum HOM05D009587 ORTHO05D004912 6.8e-07 57.8 120 33.3
Lj4g0016348 Lotus japonicus HOM05D007398 ORTHO05D004912 8.9e-07 57.4 110 37.3
Zm00001eb431260 Zea mays HOM05D007398 ORTHO05D004912 8.9e-07 57.4 130 30.0
Potri.006G052300 Populus trichocarpa HOM05D007398 ORTHO05D004912 1.2e-06 57.0 112 38.4
Zm00001eb070220 Zea mays HOM05D007398 ORTHO05D004912 1.2e-06 57.0 126 31.7
Sp6g16920 Schrenkiella parvula HOM05D009587 ORTHO05D004912 1.5e-06 56.6 125 32.0
SGA_v2.0_scaffold7G03838 Striga asiatica HOM05D011575 ORTHO05D004912 1.5e-06 56.6 103 42.7
unitig_0.g942 Utricularia gibba HOM05D011575 ORTHO05D004912 1.5e-06 56.6 82 46.3
BraA08t34019Z Brassica rapa HOM05D009587 ORTHO05D004912 2.0e-06 56.2 111 36.9
Carub.0007s1391 Capsella rubella HOM05D009587 ORTHO05D004912 2.0e-06 56.2 113 31.9
THA.LOC104817668 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 2.0e-06 56.2 111 38.7
AT5G54970 Arabidopsis thaliana HOM05D009587 ORTHO05D004912 2.6e-06 55.8 120 31.7
Phvul.008G166200 Phaseolus vulgaris HOM05D011727 ORTHO05D004912 2.6e-06 55.8 82 39.0
SGA_v2.0_scaffold4G01914 Striga asiatica HOM05D011575 ORTHO05D004912 2.6e-06 55.8 100 41.0
BolC3t14094H Brassica oleracea HOM05D009587 ORTHO05D004912 3.4e-06 55.5 102 34.3
Zm00001eb207520 Zea mays HOM05D067159 ORTHO05D050012 3.4e-06 55.5 105 40.0
SEGI_01426 Sequoiadendron giganteum HOM05D007398 ORTHO05D004912 4.4e-06 55.1 108 43.5
AL7G25880 Arabidopsis lyrata HOM05D009587 ORTHO05D004912 5.7e-06 54.7 112 36.6
Carub.0008s1526 Capsella rubella HOM05D009587 ORTHO05D004912 5.7e-06 54.7 124 31.5
AUR62020433 Chenopodium quinoa HOM05D007398 ORTHO05D004912 9.8e-06 53.9 98 46.9


User provided reference genes

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