Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 2.4e-75 285.4 145 100.0
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 2.1e-50 202.6 214 56.1
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 7.8e-42 174.1 213 50.2
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.0e-41 173.7 213 50.2
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 3.0e-41 172.2 213 49.3
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 7.6e-37 157.5 208 49.5
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.7e-36 156.4 208 49.5
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 3.2e-35 152.1 208 48.1
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 3.5e-34 148.7 206 41.7
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 3.0e-33 145.6 216 44.4
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 6.7e-33 144.4 207 40.6
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 3.3e-32 142.1 209 42.6
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 3.3e-32 142.1 211 41.2
Duzib093G2157 Durio zibethinus HOM05D006157 ORTHO05D007826 2.8e-31 139.0 108 72.2
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 6.2e-31 137.9 203 41.9
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 8.1e-31 137.5 206 42.2
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 1.5e-29 133.3 204 39.7
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 1.5e-29 133.3 204 39.7
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 3.8e-28 128.6 207 38.2
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 6.4e-28 127.9 205 41.5
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 8.4e-28 127.5 223 36.3
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 8.4e-28 127.5 203 37.9
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 1.1e-27 127.1 205 40.5
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 3.2e-27 125.6 206 39.3
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 5.5e-27 124.8 205 39.5
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 7.1e-27 124.4 201 39.8
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 1.6e-26 123.2 205 41.0
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 1.8e-25 119.8 205 38.0
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 3.0e-25 119.0 208 38.0
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 5.1e-25 118.2 160 46.2
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 6.7e-25 117.9 209 38.3
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 1.9e-24 116.3 208 37.0
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 1.9e-24 116.3 208 37.0
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 3.3e-24 115.5 209 38.3
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 5.6e-24 114.8 202 36.6
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 7.4e-24 114.4 217 37.8
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 1.3e-23 113.6 206 36.4
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 2.8e-23 112.5 214 39.3
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 2.8e-23 112.5 211 36.5
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 2.8e-23 112.5 210 38.1
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 2.8e-23 112.5 200 38.5
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 3.7e-23 112.1 213 38.0
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 3.7e-23 112.1 207 37.7
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 6.2e-23 111.3 198 36.4
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.1e-22 110.5 210 37.6
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 1.4e-22 110.2 213 36.2
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 1.8e-22 109.8 210 37.1
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 2.4e-22 109.4 202 34.7
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 3.1e-22 109.0 200 37.0
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 3.1e-22 109.0 200 40.0
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 5.3e-22 108.2 193 38.3
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 9.0e-22 107.5 205 35.1
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 2.0e-21 106.3 117 50.4
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 2.0e-21 106.3 201 37.8
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 7.6e-21 104.4 196 36.7
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 1.3e-20 103.6 202 36.1
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 2.9e-20 102.4 205 33.7
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 8.4e-20 100.9 206 34.5
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 8.4e-20 100.9 196 34.7
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 8.4e-20 100.9 200 31.5
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 1.4e-19 100.1 196 30.6
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 5.5e-19 98.2 209 33.5
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 2.1e-18 96.3 200 31.5
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 2.1e-18 96.3 199 32.2
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 2.7e-18 95.9 198 34.3
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 4.6e-18 95.1 195 36.4
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 6.0e-18 94.7 205 33.2
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 1.3e-17 93.6 208 32.2
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 2.3e-17 92.8 205 33.7
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 2.3e-17 92.8 206 34.5
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 3.0e-17 92.4 232 31.5
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 3.0e-17 92.4 204 32.8
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 3.0e-17 92.4 197 30.5
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 6.7e-17 91.3 203 30.5
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 3.3e-16 89.0 176 34.7
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 4.3e-16 88.6 199 32.7
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 1.6e-15 86.7 230 31.3
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 1.1e-14 84.0 112 46.4
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 1.1e-14 84.0 208 30.8
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.4e-14 83.6 220 31.4
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 1.4e-14 83.6 207 32.9
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 1.8e-14 83.2 187 34.8
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 9.0e-14 80.9 217 28.6
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 2.6e-13 79.3 208 29.3
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 5.9e-13 78.2 205 30.7
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 2.9e-12 75.9 113 42.5
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 8.5e-12 74.3 194 26.8
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 1.4e-11 73.6 213 31.0
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 3.2e-11 72.4 218 27.5
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 4.2e-11 72.0 121 39.7
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 1.1e-08 63.9 183 32.8
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 1.5e-08 63.5 191 29.3
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 3.3e-08 62.4 207 28.0
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 7.4e-08 61.2 186 28.5
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 9.7e-08 60.8 186 28.5
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 1.3e-07 60.5 168 28.6
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 3.7e-07 58.9 187 28.9
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 4.8e-07 58.5 134 27.6
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 3.1e-06 55.8 186 27.4
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 3.1e-06 55.8 186 27.4
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 6.9e-06 54.7 188 31.4
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 9.1e-06 54.3 187 28.3
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 9.1e-06 54.3 190 30.0


User provided reference genes

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