Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_26443 Corchorus olitorius HOM05D006182 ORTHO05D007236 0.0e+00 2050.0 1034 100.0
Thecc.08G014800 Theobroma cacao HOM05D006182 ORTHO05D007236 0.0e+00 1297.0 1347 56.2
Duzib093G2194 Durio zibethinus HOM05D006182 ORTHO05D007236 0.0e+00 1151.3 1358 51.4
Gohir.D05G017700 Gossypium hirsutum HOM05D006182 ORTHO05D007236 1.4e-289 1000.0 1293 46.6
Gorai.009G018100 Gossypium raimondii HOM05D006182 ORTHO05D007236 4.3e-283 978.4 1340 45.0
Gohir.A05G016750 Gossypium hirsutum HOM05D006182 ORTHO05D007236 1.4e-281 973.4 1340 44.8
Atru.chr13.613 Acer truncatum HOM05D006182 ORTHO05D007236 6.7e-228 795.0 1019 47.1
Potri.002G129000 Populus trichocarpa HOM05D006182 ORTHO05D007236 5.5e-214 748.8 1023 44.0
Manes.05G170000 Manihot esculenta HOM05D006182 ORTHO05D007236 1.5e-203 714.1 1017 43.8
Cfa018501 Carpinus fangiana HOM05D006182 ORTHO05D007236 3.5e-200 703.0 1023 42.4
Sabra02G0101100 Salix brachista HOM05D006182 ORTHO05D007236 1.5e-198 697.6 1065 40.8
CiPaw.15G064200 Carya illinoinensis HOM05D006182 ORTHO05D007236 3.2e-198 696.4 1017 42.8
Prupe.1G390200 Prunus persica HOM05D006182 ORTHO05D007236 8.0e-197 691.8 1035 42.7
QL02p006174 Quercus lobata HOM05D006182 ORTHO05D007236 8.5e-191 671.8 1046 40.6
TWI56G0571 Tripterygium wilfordii HOM05D006182 ORTHO05D007236 1.4e-188 664.5 990 42.1
Haze_17575 Corylus avellana HOM05D006182 ORTHO05D007236 5.0e-183 646.0 1083 39.2
RcHm_v2.0_Chr7g0224651 Rosa chinensis HOM05D006182 ORTHO05D007236 1.9e-182 644.0 1027 40.9
Actinidia22605 Actinidia chinensis HOM05D006182 ORTHO05D007236 3.0e-180 636.7 1043 39.1
MD08G1060500 Malus domestica HOM05D006182 ORTHO05D007236 1.2e-179 634.8 1019 39.9
FAN08G0368 Fragaria x ananassa HOM05D006182 ORTHO05D007236 2.7e-176 623.6 1024 39.5
FvH4_5g30300 Fragaria vesca HOM05D006182 ORTHO05D007236 3.5e-176 623.2 1018 39.2
vmacro21568 Vaccinium macrocarpon HOM05D006182 ORTHO05D007236 4.6e-168 596.3 1041 37.5
FAN18G2601 Fragaria x ananassa HOM05D006182 ORTHO05D007236 2.8e-165 587.0 1048 37.5
Dinv35991 Davidia involucrata HOM05D006182 ORTHO05D007236 2.2e-162 577.4 854 42.0
PGR031G1311 Punica granatum HOM05D006182 ORTHO05D007236 2.8e-157 560.5 1016 37.6
CsaV3_4G034020 Cucumis sativus L. HOM05D006182 ORTHO05D007236 3.5e-152 543.5 1015 36.3
Nn6g32369 Nelumbo nucifera HOM05D006182 ORTHO05D007236 7.3e-150 535.8 1027 36.9
Psat4g135680 Pisum sativum HOM05D006182 ORTHO05D007236 7.3e-150 535.8 1033 36.5
Ciclev10003312m.g Citrus clementina HOM05D006182 ORTHO05D007236 2.1e-149 534.3 827 42.1
Rhsim06G0045000 Rhododendron simsii HOM05D006182 ORTHO05D007236 8.1e-149 532.3 1037 35.9
CANSAT64G1322 Cannabis sativa HOM05D006182 ORTHO05D007236 2.4e-145 520.8 1001 36.6
Sed0017871 Sechium edule HOM05D006182 ORTHO05D007236 2.4e-145 520.8 1014 35.1
Lj4A50G37 Lonicera japonica HOM05D006182 ORTHO05D007236 1.7e-143 514.6 1028 35.4
Hma1.2p1_0951F.1_g240770 Hydrangea macrophylla HOM05D006182 ORTHO05D007236 3.9e-143 513.5 956 37.4
Lj3g0019378 Lotus japonicus HOM05D006182 ORTHO05D007236 2.5e-142 510.8 1035 36.4
Cc00_g16120 Coffea canephora HOM05D006182 ORTHO05D007236 6.9e-140 502.7 1024 34.6
DCAR_012766 Daucus carota HOM05D006182 ORTHO05D007236 9.9e-139 498.8 1020 33.5
ClCG05G019560 Citrullus lanatus HOM05D006182 ORTHO05D007236 8.4e-138 495.7 956 34.5
TPR.G9412 Trifolium pratense HOM05D006182 ORTHO05D007236 1.9e-137 494.6 1038 35.7
MBI16_g27588_MAGBIO Magnolia biondii HOM05D006182 ORTHO05D007236 5.4e-137 493.0 996 36.2
MSTRG.25113 Avicennia marina HOM05D006182 ORTHO05D007236 9.3e-137 492.3 1018 35.5
arahy.Tifrunner.gnm1.ann1.903WAW Arachis hypogaea HOM05D006182 ORTHO05D007236 3.0e-135 487.3 1027 35.4
arahy.Tifrunner.gnm1.ann1.I266YZ Arachis hypogaea HOM05D006182 ORTHO05D007236 3.0e-135 487.3 1028 35.5
CAN.G210.12 Capsicum annuum HOM05D006182 ORTHO05D007236 1.1e-132 478.8 1039 33.3
Phvul.011G175100 Phaseolus vulgaris HOM05D006182 ORTHO05D007236 6.9e-132 476.1 1033 34.5
Aqoxy2G01750 Aquilegia oxysepala HOM05D006182 ORTHO05D007236 9.0e-132 475.7 1046 33.1
Sopen12g025610 Solanum pennellii HOM05D006182 ORTHO05D007236 3.8e-130 470.3 1035 34.2
Solyc12g062480.3 Solanum lycopersicum HOM05D006182 ORTHO05D007236 5.5e-129 466.5 1036 33.9
Sopen07g009980 Solanum pennellii HOM05D006182 ORTHO05D007236 9.3e-129 465.7 1018 34.0
PGSC0003DMG400031482 Solanum tuberosum HOM05D006182 ORTHO05D007236 1.6e-128 464.9 1044 33.7
MELO3C032401.2 Cucumis melo HOM05D006182 ORTHO05D007236 6.0e-128 463.0 1015 33.8
SGA_v2.0_scaffold217G42430 Striga asiatica HOM05D006182 ORTHO05D007236 3.7e-125 453.8 1023 33.5
Glyma.08G236800 Glycine max HOM05D006182 ORTHO05D007236 2.6e-123 447.6 974 34.1
PSO541G3468 Papaver somniferum HOM05D006182 ORTHO05D007236 1.7e-122 444.9 1046 33.5
THA.LOC104816122 Tarenaya hassleriana HOM05D006182 ORTHO05D007236 7.1e-121 439.5 1001 34.3
ECA232G1194 Erigeron canadensis HOM05D006182 ORTHO05D007236 8.7e-119 432.6 1018 31.4
Sc15g0006450 Simmondsia chinensis HOM05D006182 ORTHO05D007236 2.5e-118 431.0 936 34.8
HanXRQChr09g0268131 Helianthus annuus HOM05D006182 ORTHO05D007236 1.2e-115 422.2 1018 31.8
EL10Ac1g01812 Beta vulgaris HOM05D006182 ORTHO05D007236 5.0e-114 416.8 994 32.1
PSO675G0403 Papaver somniferum HOM05D006182 ORTHO05D007236 9.3e-113 412.5 1012 32.3
Carub.0006s2813 Capsella rubella HOM05D006182 ORTHO05D007236 5.3e-108 396.7 998 31.8
Hund17608 Selenicereus undatus HOM05D006182 ORTHO05D007236 4.5e-107 393.7 954 32.5
Thhalv10029299m.g Eutrema salsugineum HOM05D006182 ORTHO05D007236 2.2e-106 391.3 1000 31.4
SalBow7G1322 Salvia bowleyana HOM05D006182 ORTHO05D007236 2.5e-105 387.9 1011 31.5
AL6G43320 Arabidopsis lyrata HOM05D006182 ORTHO05D007236 7.2e-105 386.3 997 31.3
Aa31LG9G14980 Aethionema arabicum HOM05D006182 ORTHO05D007236 1.6e-104 385.2 999 30.8
C09p37620 Brassica napus HOM05D006182 ORTHO05D007236 6.1e-104 383.3 999 32.2
BcaC04g20947 Brassica carinata HOM05D006182 ORTHO05D007236 1.0e-103 382.5 1003 32.1
A09p29430 Brassica napus HOM05D006182 ORTHO05D007236 1.8e-103 381.7 993 32.7
BcaB01g01419 Brassica carinata HOM05D006182 ORTHO05D007236 2.3e-103 381.3 998 31.7
Ah.05g168900 Amaranthus hybridus HOM05D006182 ORTHO05D007236 3.9e-103 380.6 972 32.0
Peaxi162Scf00929g00711 Petunia axillaris HOM05D006182 ORTHO05D007236 8.8e-103 379.4 781 35.0
BolC9t56593H Brassica oleracea HOM05D006182 ORTHO05D007236 3.3e-102 377.5 1003 32.1
BraA09t38510Z Brassica rapa HOM05D006182 ORTHO05D007236 3.3e-102 377.5 1009 32.2
Lsat_1_v5_gn_4_124380 Lactuca sativa HOM05D006182 ORTHO05D007236 1.0e-98 365.9 990 29.8
Cpa.g.sc376.1 Carica papaya HOM05D006182 ORTHO05D007236 5.0e-98 363.6 631 38.7
Oeu033637.2 Olea europaea HOM05D006182 ORTHO05D007236 4.2e-97 360.5 817 33.8
Sp6g07920 Schrenkiella parvula HOM05D006182 ORTHO05D007236 7.2e-97 359.8 997 30.2
ATR0225G007 Amborella trichopoda HOM05D006182 ORTHO05D007236 8.8e-95 352.8 1057 29.9
Nitab4.5_0003237g0020 Nicotiana tabacum HOM05D006182 ORTHO05D007236 1.7e-93 348.6 826 32.8
AUR62031379 Chenopodium quinoa HOM05D006182 ORTHO05D007236 1.2e-86 325.9 1247 25.7
AT4G09680 Arabidopsis thaliana HOM05D006182 ORTHO05D007236 4.5e-83 313.9 835 32.3
Nitab4.5_0001611g0150 Nicotiana tabacum HOM05D006182 ORTHO05D007236 1.8e-76 292.0 928 28.2
Solyc07g021120.3 Solanum lycopersicum HOM05D006182 ORTHO05D007236 1.0e-74 286.2 721 32.5
Migut.C00612 Erythranthe guttata HOM05D006182 ORTHO05D007236 2.3e-74 285.0 699 32.3
Zm00001eb311480 Zea mays HOM05D006182 ORTHO05D007236 1.0e-58 233.0 1002 26.1
unitig_8.g5014 Utricularia gibba HOM05D006182 ORTHO05D007236 1.9e-57 228.8 999 23.7
GSVIVG01009571001 Vitis vinifera HOM05D006182 ORTHO05D007236 7.3e-57 226.9 270 49.6
Lalb_Chr04g0264191 Lupinus albus HOM05D006182 ORTHO05D007236 2.6e-46 191.8 411 35.8
CDE02G1449 Ceratophyllum demersum HOM05D006182 ORTHO05D007236 1.9e-41 175.6 1021 24.4
Lalb_Chr04g0264181 Lupinus albus HOM05D006182 ORTHO05D007236 7.6e-38 163.7 280 42.9
VMungo1127G0903 Vigna mungo HOM05D006182 ORTHO05D007236 4.9e-37 161.0 311 32.5
Oeu032242.1 Olea europaea HOM05D006182 ORTHO05D007236 5.4e-36 157.5 215 42.3
CARHR260630 Cardamine hirsuta HOM05D006182 ORTHO05D007236 1.6e-35 156.0 542 30.4
Nitab4.5_0001611g0140 Nicotiana tabacum HOM05D006182 ORTHO05D007236 1.4e-28 132.9 209 37.3
Nitab4.5_0003237g0010 Nicotiana tabacum HOM05D006182 ORTHO05D007236 3.5e-27 128.3 180 40.0
Ca_05108_v3 Cicer arietinum L. HOM05D006182 ORTHO05D007236 1.1e-25 123.2 172 44.2
FAN10G2690 Fragaria x ananassa HOM05D006182 ORTHO05D007236 9.6e-25 120.2 150 44.0
HPP92_010557 Vanilla planifolia HOM05D006182 ORTHO05D007236 1.8e-23 115.9 332 27.1
HPP92_010556 Vanilla planifolia HOM05D006182 ORTHO05D007236 6.9e-23 114.0 219 32.9
GSVIVG01009572001 Vitis vinifera HOM05D006182 ORTHO05D007236 2.6e-22 112.1 146 47.9
COL.COLO4_32853 Corchorus olitorius HOM05D043206 ORTHO05D007236 2.2e-21 109.0 77 71.4
Pp3c12_3560 Physcomitrium patens HOM05D006182 ORTHO05D007236 5.4e-20 104.4 270 29.3
Lalb_Chr04g0264231 Lupinus albus HOM05D006182 ORTHO05D007236 9.3e-20 103.6 65 72.3
FAN19G3122 Fragaria x ananassa HOM05D006182 ORTHO05D007236 3.9e-18 98.2 66 68.2
SHI08237 Sapria himalayana HOM05D006182 ORTHO05D007236 1.9e-17 95.9 253 31.6
Lalb_Chr04g0264211 Lupinus albus HOM05D006182 ORTHO05D007236 3.7e-16 91.7 119 43.7
SEGI_19792 Sequoiadendron giganteum HOM05D006182 ORTHO05D007236 1.2e-14 86.7 299 28.1
Sc15g0006460 Simmondsia chinensis HOM05D006182 ORTHO05D007236 7.6e-14 84.0 66 60.6
unitig_19.g30005 Utricularia gibba HOM05D006182 ORTHO05D007236 2.9e-13 82.0 232 28.0
FAN16G1533 Fragaria x ananassa HOM05D006182 ORTHO05D007236 2.7e-11 75.5 129 34.1
Mapoly0037s0065 Marchantia polymorpha HOM05D006182 ORTHO05D007236 6.0e-11 74.3 273 25.3
TWI36G0305 Tripterygium wilfordii HOM05D006182 ORTHO05D007236 6.0e-11 74.3 40 80.0
Cpa.g.c37201 Carica papaya HOM05D006182 ORTHO05D007236 3.0e-10 72.0 39 79.5
Psat2g076400 Pisum sativum HOM05D002050 ORTHO05D001949 5.1e-10 71.2 55 56.4
SEGI_35767 Sequoiadendron giganteum HOM05D006182 ORTHO05D007236 3.3e-09 68.6 166 28.3
unitig_19.g30006 Utricularia gibba HOM05D006182 ORTHO05D007236 9.0e-07 60.5 155 27.1
FAN17G1630 Fragaria x ananassa HOM05D006182 ORTHO05D007236 4.5e-06 58.2 50 52.0
SEGI_31096 Sequoiadendron giganteum HOM05D006182 ORTHO05D007236 5.8e-06 57.8 125 30.4


User provided reference genes

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