Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 1.7e-246 855.5 419 100.0
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 1.4e-195 686.4 421 78.9
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 2.0e-194 682.6 421 78.4
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 9.7e-194 680.2 421 78.6
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 2.4e-176 622.5 422 73.2
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 1.7e-158 563.1 425 65.6
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 3.6e-156 555.4 420 63.3
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 2.0e-154 549.7 407 67.6
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 2.9e-153 545.8 412 67.2
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 6.4e-153 544.7 418 63.6
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 4.6e-151 538.5 419 64.2
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 3.0e-150 535.8 424 63.4
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 3.3e-149 532.3 410 63.2
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 5.6e-149 531.6 422 61.4
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 5.6e-149 531.6 428 61.4
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 3.6e-148 528.9 422 61.8
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 8.9e-147 524.2 421 61.5
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 9.9e-146 520.8 428 62.1
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 1.6e-143 513.5 415 59.8
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 4.6e-143 511.9 423 59.1
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 1.3e-142 510.4 446 58.1
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 1.7e-142 510.0 414 61.8
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 3.3e-141 505.8 424 60.8
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 5.6e-141 505.0 411 60.8
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 9.6e-141 504.2 409 61.9
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 2.8e-140 502.7 419 58.0
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 3.6e-140 502.3 421 60.8
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 1.1e-139 500.7 422 58.5
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 2.4e-139 499.6 417 60.7
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 2.4e-139 499.6 417 61.4
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 5.2e-139 498.4 419 59.9
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 6.9e-139 498.0 420 59.5
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 1.2e-138 497.3 411 59.4
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 1.5e-138 496.9 425 58.8
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 2.0e-138 496.5 416 58.2
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 2.6e-138 496.1 471 53.7
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 7.6e-138 494.6 430 60.9
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 7.6e-138 494.6 421 58.9
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 9.9e-138 494.2 416 58.7
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 2.2e-137 493.0 542 50.0
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 2.2e-137 493.0 426 58.7
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 2.9e-137 492.7 423 57.9
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 3.8e-137 492.3 413 60.5
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 6.4e-137 491.5 413 59.1
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 6.4e-137 491.5 411 60.3
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 1.1e-136 490.7 435 58.2
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 2.1e-135 486.5 411 58.4
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 2.7e-135 486.1 411 58.2
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 6.0e-135 485.0 411 59.6
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 6.0e-135 485.0 425 57.9
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 1.0e-134 484.2 408 59.3
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 1.0e-134 484.2 413 59.1
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 1.0e-134 484.2 415 57.3
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 3.0e-134 482.6 444 56.8
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 5.1e-134 481.9 422 58.5
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 6.6e-134 481.5 441 56.0
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 6.6e-134 481.5 441 56.0
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 1.1e-133 480.7 427 58.3
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 2.5e-133 479.6 423 58.9
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 4.3e-133 478.8 411 58.6
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 9.6e-133 477.6 420 56.7
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 3.6e-132 475.7 407 59.7
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 6.2e-132 474.9 422 56.2
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 1.4e-131 473.8 431 57.8
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 1.8e-131 473.4 423 58.4
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 2.4e-131 473.0 367 66.2
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 1.5e-130 470.3 463 52.7
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 2.0e-130 469.9 414 57.0
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 5.4e-128 461.8 404 56.9
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 7.9e-127 458.0 434 53.2
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 3.9e-126 455.7 419 56.1
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 5.1e-126 455.3 438 54.1
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 1.9e-125 453.4 425 54.6
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 4.0e-123 445.7 416 55.0
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 1.1e-120 437.6 416 54.6
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 4.2e-120 435.6 423 55.1
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 6.2e-116 421.8 373 55.2
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 5.3e-115 418.7 363 59.0
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 6.9e-115 418.3 387 56.3
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 8.4e-113 411.4 420 48.1
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 8.4e-113 411.4 377 57.0
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 2.7e-111 406.4 337 60.8
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 1.0e-110 404.4 451 50.3
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 1.9e-109 400.2 438 49.8
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 7.4e-109 398.3 399 50.9
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 1.4e-107 394.0 356 59.0
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 1.4e-107 394.0 438 49.5
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 2.2e-105 386.7 380 52.9
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 2.5e-104 383.3 419 46.5
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 1.6e-103 380.6 349 55.3
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 3.7e-92 342.8 225 76.9
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 1.8e-91 340.5 435 43.7
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 1.2e-90 337.8 426 42.3
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 2.9e-89 333.2 406 46.8
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 6.1e-87 325.5 332 52.1
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 2.0e-82 310.5 344 45.9
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 2.6e-82 310.1 286 50.7
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 4.2e-80 302.8 347 47.8
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 8.6e-65 251.9 161 71.4
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 6.1e-63 245.7 291 44.7
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 1.8e-54 217.6 190 52.1
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 3.7e-52 209.9 391 33.2
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 3.2e-51 206.8 227 49.8
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 5.6e-48 196.1 167 65.9
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 3.6e-47 193.4 220 43.6
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 2.4e-35 154.1 151 54.3
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 7.1e-27 125.9 82 70.7
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 9.2e-27 125.6 159 45.9
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 3.1e-14 84.0 64 59.4
Cfa025491 Carpinus fangiana HOM05D007089 ORTHO05D008959 4.9e-12 76.6 220 25.9
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 1.4e-11 75.1 92 46.7
CDE01G0194 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 7.1e-11 72.8 53 64.2


User provided reference genes

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