Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 3.2e-128 461.8 248 100.0
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 1.2e-101 373.6 248 83.1
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 1.8e-91 339.7 249 77.5
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 7.0e-91 337.8 249 76.7
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 1.0e-89 334.0 258 74.8
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 9.2e-75 284.3 249 63.5
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 8.6e-73 277.7 245 64.5
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 2.5e-72 276.2 249 61.0
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 1.6e-71 273.5 253 63.2
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 2.8e-71 272.7 249 59.8
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 2.3e-70 269.6 232 64.2
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 3.1e-70 269.2 249 59.4
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 8.9e-70 267.7 229 63.3
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 3.4e-69 265.8 242 62.0
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 1.3e-68 263.8 204 68.6
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 2.9e-68 262.7 194 70.6
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 4.9e-68 261.9 248 59.7
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 1.4e-67 260.4 252 60.7
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 3.2e-67 259.2 243 61.3
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 3.2e-67 259.2 237 64.1
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 9.2e-67 257.7 235 59.6
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 2.7e-66 256.1 233 60.5
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 1.0e-65 254.2 244 61.5
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 1.3e-65 253.8 250 58.4
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 1.3e-65 253.8 249 59.0
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 3.9e-65 252.3 249 57.0
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 1.5e-64 250.4 200 65.5
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 1.2e-63 247.3 251 57.4
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 1.6e-63 246.9 251 59.0
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 1.1e-62 244.2 252 56.3
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 2.4e-62 243.0 199 65.3
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 3.1e-62 242.7 240 57.1
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 1.5e-61 240.4 249 57.8
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 2.0e-61 240.0 194 65.5
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 2.0e-61 240.0 249 54.6
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 3.4e-61 239.2 225 59.6
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 5.8e-61 238.4 251 55.4
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 1.7e-60 236.9 193 65.3
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 2.2e-60 236.5 192 65.6
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 3.2e-59 232.6 220 62.3
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 5.4e-59 231.9 244 54.1
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 1.6e-58 230.3 247 54.7
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 2.7e-58 229.6 199 62.8
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 4.6e-58 228.8 234 55.6
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 4.6e-58 228.8 247 54.3
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 6.0e-58 228.4 201 61.2
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 1.3e-57 227.3 229 56.3
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 1.7e-57 226.9 230 57.4
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 2.3e-57 226.5 216 63.0
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 3.0e-57 226.1 195 63.1
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 5.1e-57 225.3 193 64.2
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 6.6e-57 224.9 251 55.0
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 8.7e-57 224.6 231 56.7
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 1.1e-56 224.2 197 62.4
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 2.5e-56 223.0 240 55.0
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 5.6e-56 221.9 194 61.3
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 5.6e-56 221.9 213 59.2
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 5.6e-56 221.9 242 52.9
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 9.6e-56 221.1 183 61.2
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 1.6e-55 220.3 251 53.8
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 6.2e-55 218.4 193 61.7
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 1.1e-54 217.6 231 55.0
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 6.9e-54 214.9 209 56.9
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 9.0e-54 214.5 192 58.9
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 1.2e-53 214.2 193 60.6
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 1.2e-53 214.2 193 60.6
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 1.2e-53 214.2 193 59.1
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 1.5e-53 213.8 259 51.7
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 2.0e-53 213.4 246 50.8
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 2.0e-53 213.4 253 52.2
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 2.6e-53 213.0 191 61.8
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 4.4e-53 212.2 191 61.3
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 5.8e-53 211.8 193 59.6
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 5.8e-53 211.8 171 66.1
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 7.6e-53 211.5 193 60.1
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 9.9e-53 211.1 215 56.7
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 1.3e-52 210.7 163 65.6
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 1.7e-52 210.3 193 60.1
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 2.9e-52 209.5 193 59.1
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 2.8e-47 193.0 243 50.2
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 2.8e-47 193.0 193 57.0
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 1.4e-43 180.6 179 58.7
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 4.2e-43 179.1 162 58.6
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 9.3e-43 177.9 190 54.2
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 2.1e-42 176.8 241 46.1
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 2.7e-42 176.4 222 44.6
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 1.8e-41 173.7 173 53.2
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 5.1e-41 172.2 250 45.6
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 1.5e-40 170.6 224 45.1
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 2.5e-40 169.9 187 53.5
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 1.4e-38 164.1 119 70.6
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 1.1e-35 154.5 192 47.4
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 1.9e-35 153.7 185 49.7
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 1.2e-34 151.0 169 47.3
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 1.6e-31 140.6 91 81.3
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 2.1e-31 140.2 174 47.7
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 4.8e-31 139.0 187 44.9
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 2.0e-29 133.7 133 55.6
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 7.6e-29 131.7 96 69.8
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 1.6e-26 124.0 89 70.8
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 1.8e-22 110.5 118 53.4
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 5.9e-21 105.5 109 56.0
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 1.4e-19 100.9 106 54.7
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 3.6e-18 96.3 278 30.9
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 2.0e-13 80.5 54 72.2
Dinv39425 Davidia involucrata HOM05D002064 ORTHO05D002118 6.3e-07 58.9 49 65.3
Ah.05g167420 Amaranthus hybridus HOM05D007221 ORTHO05D009204 3.1e-06 56.6 42 59.5


User provided reference genes

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