Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_26243 Corchorus olitorius HOM05D007079 ORTHO05D009006 1.8e-204 715.7 353 100.0
Thecc.08G033400 Theobroma cacao HOM05D007079 ORTHO05D009006 1.7e-167 592.8 349 83.1
Duzib093G0231 Durio zibethinus HOM05D007079 ORTHO05D009006 8.8e-164 580.5 349 81.1
Gorai.009G271700 Gossypium raimondii HOM05D007079 ORTHO05D009006 2.7e-160 568.9 353 79.0
Gohir.D05G259900 Gossypium hirsutum HOM05D007079 ORTHO05D009006 9.5e-142 507.3 312 79.5
Gohir.A05G258332 Gossypium hirsutum HOM05D007079 ORTHO05D009006 7.5e-139 497.7 312 77.6
Atru.chr13.409 Acer truncatum HOM05D007079 ORTHO05D009006 1.7e-130 469.9 347 66.9
QL02p009607 Quercus lobata HOM05D007079 ORTHO05D009006 8.4e-130 467.6 358 66.5
Sabra02G0025400 Salix brachista HOM05D007079 ORTHO05D009006 1.6e-125 453.4 338 66.3
Cfa013875 Carpinus fangiana HOM05D007079 ORTHO05D009006 1.1e-124 450.7 352 65.1
Haze_22555 Corylus avellana HOM05D007079 ORTHO05D009006 1.7e-122 443.4 372 61.6
CiPaw.07G156900 Carya illinoinensis HOM05D007079 ORTHO05D009006 8.4e-122 441.0 355 63.7
TWI56G1128 Tripterygium wilfordii HOM05D007079 ORTHO05D009006 8.4e-122 441.0 309 71.8
Potri.002G031500 Populus trichocarpa HOM05D007079 ORTHO05D009006 7.1e-121 438.0 329 66.9
Ciclev10003294m.g Citrus clementina HOM05D007079 ORTHO05D009006 1.0e-119 434.1 361 60.4
GSVIVG01009772001 Vitis vinifera HOM05D007079 ORTHO05D009006 8.7e-119 431.0 357 61.1
Hma1.2p1_0469F.1_g158910 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 1.9e-118 429.9 347 61.4
Actinidia15361 Actinidia chinensis HOM05D007079 ORTHO05D009006 6.2e-117 424.9 327 63.0
Rhsim06G0028600 Rhododendron simsii HOM05D007079 ORTHO05D009006 3.1e-116 422.5 362 60.8
CSS0042333 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D009006 2.4e-113 412.9 330 60.9
RcHm_v2.0_Chr6g0301681 Rosa chinensis HOM05D007079 ORTHO05D009006 5.4e-113 411.8 304 65.5
Lalb_Chr22g0354571 Lupinus albus HOM05D007079 ORTHO05D009006 1.6e-112 410.2 353 58.9
PGSC0003DMG400010042 Solanum tuberosum HOM05D007079 ORTHO05D009006 1.6e-112 410.2 357 56.6
Prupe.1G374300 Prunus persica HOM05D007079 ORTHO05D009006 1.0e-111 407.5 305 66.9
Ca_13380_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 1.3e-111 407.1 305 66.6
PGR031G2472 Punica granatum HOM05D007079 ORTHO05D009006 3.9e-111 405.6 359 56.8
vmacro21681 Vaccinium macrocarpon HOM05D007079 ORTHO05D009006 6.7e-111 404.8 368 57.9
FvH4_2g39320 Fragaria vesca HOM05D007079 ORTHO05D009006 1.1e-110 404.1 305 64.9
Ca_30048_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 7.4e-110 401.4 301 66.4
Lj5g0022889 Lotus japonicus HOM05D007079 ORTHO05D009006 1.3e-109 400.6 305 63.3
TPR.G30477 Trifolium pratense HOM05D007079 ORTHO05D009006 2.8e-109 399.4 319 63.3
Phvul.001G011600 Phaseolus vulgaris HOM05D007079 ORTHO05D009006 3.6e-109 399.1 308 62.3
CsaV3_2G029020 Cucumis sativus L. HOM05D007079 ORTHO05D009006 4.8e-109 398.7 298 65.4
Lj4A133T11 Lonicera japonica HOM05D007079 ORTHO05D009006 4.8e-109 398.7 297 65.7
Solyc02g089890.4 Solanum lycopersicum HOM05D002466 ORTHO05D009006 4.8e-109 398.7 329 59.0
CAN.G836.5 Capsicum annuum HOM05D007079 ORTHO05D009006 1.8e-108 396.7 299 62.5
MELO3C010968.2 Cucumis melo HOM05D007079 ORTHO05D009006 4.0e-108 395.6 298 65.1
MD08G1024600 Malus domestica HOM05D007079 ORTHO05D009006 4.0e-108 395.6 304 64.1
HanXRQChr09g0264171 Helianthus annuus HOM05D007079 ORTHO05D009006 2.0e-107 393.3 299 64.2
Medtr1g022940 Medicago truncatula HOM05D007079 ORTHO05D009006 2.0e-107 393.3 341 60.7
Sopen02g034590 Solanum pennellii HOM05D007079 ORTHO05D009006 2.0e-107 393.3 329 58.4
Glyma.17G253400 Glycine max HOM05D007079 ORTHO05D009006 3.4e-107 392.5 303 62.4
Psat6g009680 Pisum sativum HOM05D007079 ORTHO05D009006 4.5e-107 392.1 392 54.8
Nn5g29708 Nelumbo nucifera HOM05D007079 ORTHO05D009006 9.9e-107 391.0 364 57.7
THA.LOC104813812 Tarenaya hassleriana HOM05D007079 ORTHO05D009006 1.7e-106 390.2 304 62.8
Migut.K00854 Erythranthe guttata HOM05D007079 ORTHO05D009006 3.8e-106 389.0 349 57.0
Sed0004812 Sechium edule HOM05D007079 ORTHO05D009006 6.4e-106 388.3 336 58.9
VMungo0647G1101 Vigna mungo HOM05D007079 ORTHO05D009006 6.4e-106 388.3 314 59.9
Carub.0001s1923 Capsella rubella HOM05D007079 ORTHO05D009006 8.4e-106 387.9 347 55.9
ClCG08G014740 Citrullus lanatus HOM05D007079 ORTHO05D009006 1.9e-105 386.7 311 62.4
Sc02g0005670 Simmondsia chinensis HOM05D007079 ORTHO05D009006 1.9e-105 386.7 310 62.3
Hund26893 Selenicereus undatus HOM05D007079 ORTHO05D009006 4.2e-105 385.6 319 58.6
MBI16_g23831_MAGBIO Magnolia biondii HOM05D007079 ORTHO05D009006 1.2e-104 384.0 355 55.8
Manes.05G155100 Manihot esculenta HOM05D007079 ORTHO05D009006 2.1e-104 383.3 277 68.6
Cc07_g05190 Coffea canephora HOM05D007079 ORTHO05D009006 3.5e-104 382.5 316 58.9
AL1G32410 Arabidopsis lyrata HOM05D007079 ORTHO05D009006 6.0e-104 381.7 344 55.5
Aa31LG7G4270 Aethionema arabicum HOM05D007079 ORTHO05D009006 7.9e-104 381.3 343 56.9
Oeu032890.1 Olea europaea HOM05D007079 ORTHO05D009006 1.0e-103 380.9 302 61.9
Sp1g17520 Schrenkiella parvula HOM05D007079 ORTHO05D009006 1.0e-103 380.9 347 56.2
TAR376G0129 Trochodendron aralioides HOM05D007079 ORTHO05D009006 1.0e-103 380.9 333 57.7
A06p15810 Brassica napus HOM05D007079 ORTHO05D009006 1.3e-103 380.6 347 56.8
arahy.Tifrunner.gnm1.ann1.1TI5B0 Arachis hypogaea HOM05D007079 ORTHO05D009006 8.7e-103 377.9 304 64.8
Aqoxy6G01196 Aquilegia oxysepala HOM05D007079 ORTHO05D009006 2.8e-101 372.9 359 55.2
AT1G19690 Arabidopsis thaliana HOM05D007079 ORTHO05D009006 3.7e-101 372.5 343 54.5
BolC5t30520H Brassica oleracea HOM05D007079 ORTHO05D009006 3.7e-101 372.5 312 59.0
Lsat_1_v5_gn_2_87400 Lactuca sativa HOM05D007079 ORTHO05D009006 3.7e-101 372.5 356 54.5
ECA238G0935 Erigeron canadensis HOM05D007079 ORTHO05D009006 4.8e-101 372.1 361 53.2
MSTRG.15412 Avicennia marina HOM05D007079 ORTHO05D009006 6.2e-101 371.7 306 59.2
BraA06t24691Z Brassica rapa HOM05D007079 ORTHO05D009006 6.2e-101 371.7 348 55.5
Thhalv10008056m.g Eutrema salsugineum HOM05D007079 ORTHO05D009006 1.4e-100 370.5 349 55.9
C05p18130 Brassica napus HOM05D007079 ORTHO05D009006 2.4e-100 369.8 312 59.0
BcaB07g31982 Brassica carinata HOM05D007079 ORTHO05D009006 4.0e-100 369.0 304 58.9
PSO541G3287 Papaver somniferum HOM05D007079 ORTHO05D009006 1.3e-98 364.0 304 61.2
Dinv39455 Davidia involucrata HOM05D007079 ORTHO05D009006 2.2e-98 363.2 243 70.0
Peaxi162Scf00535g00126 Petunia axillaris HOM05D007079 ORTHO05D009006 4.2e-97 359.0 316 57.0
AUR62014482 Chenopodium quinoa HOM05D007079 ORTHO05D009006 1.2e-96 357.5 300 58.3
Glyma.14G071200 Glycine max HOM05D007079 ORTHO05D009006 1.0e-95 354.4 308 58.4
SGA_v2.0_scaffold34G13653 Striga asiatica HOM05D007079 ORTHO05D009006 3.0e-95 352.8 314 57.6
PSO675G2324 Papaver somniferum HOM05D007079 ORTHO05D009006 5.1e-95 352.1 354 53.4
CANSAT78G0946 Cannabis sativa HOM05D007079 ORTHO05D009006 6.7e-95 351.7 284 63.4
Eucgr.F01861 Eucalyptus grandis HOM05D007079 ORTHO05D009006 6.7e-95 351.7 342 51.5
FAN27G2216 Fragaria x ananassa HOM05D007079 ORTHO05D009006 1.5e-94 350.5 304 59.2
Cpa.g.sc2827.1 Carica papaya HOM05D007079 ORTHO05D009006 6.3e-93 345.1 248 66.9
Ah.05g180850 Amaranthus hybridus HOM05D007079 ORTHO05D009006 1.1e-92 344.4 317 53.6
CARHR020210 Cardamine hirsuta HOM05D007079 ORTHO05D009006 3.2e-89 332.8 278 57.9
FAN26G1347 Fragaria x ananassa HOM05D007079 ORTHO05D009006 2.7e-88 329.7 247 65.2
FAN15G1571 Fragaria x ananassa HOM05D007079 ORTHO05D009006 3.6e-88 329.3 247 64.8
Zm00001eb128420 Zea mays HOM05D007079 ORTHO05D009006 6.1e-88 328.6 301 53.2
ATR1158G010 Amborella trichopoda HOM05D007079 ORTHO05D009006 7.9e-88 328.2 311 53.1
arahy.Tifrunner.gnm1.ann1.GTY6RX Arachis hypogaea HOM05D007079 ORTHO05D009006 1.8e-87 327.0 241 68.9
SalBow1G2109 Salvia bowleyana HOM05D007079 ORTHO05D009006 6.3e-85 318.5 278 57.6
EL10Ac1g00614 Beta vulgaris HOM05D007079 ORTHO05D009006 1.0e-82 311.2 389 44.2
Nitab4.5_0002108g0010 Nicotiana tabacum HOM05D002466 ORTHO05D002668 1.0e-82 311.2 288 53.5
CDE05G2112 Ceratophyllum demersum HOM05D007079 ORTHO05D009006 2.6e-78 296.6 304 51.0
Nitab4.5_0005754g0040 Nicotiana tabacum HOM05D007079 ORTHO05D009006 5.3e-76 288.9 314 48.1
arahy.Tifrunner.gnm1.ann1.6FY89R Arachis hypogaea HOM05D000259 ORTHO05D000155 2.0e-75 287.0 312 52.9
Hma1.2p1_0469F.1_g158920 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 2.6e-70 270.0 190 67.4
Cpa.g.sc140.8 Carica papaya HOM05D007079 ORTHO05D009006 5.3e-60 235.7 279 47.0
AagrBONN_evm.TU.Sc2ySwM_344.2117 Anthoceros agrestis HOM05D007079 ORTHO05D009006 2.7e-56 223.4 316 41.8
DCAR_026263 Daucus carota HOM05D007079 ORTHO05D009006 2.7e-56 223.4 235 48.9
Mapoly0043s0142 Marchantia polymorpha HOM05D007079 ORTHO05D009006 2.7e-56 223.4 312 42.3
Pp3c24_15610 Physcomitrium patens HOM05D007079 ORTHO05D009006 1.8e-55 220.7 310 41.6
SMO266G0019 Selaginella moellendorffii HOM05D007079 ORTHO05D009006 8.6e-50 201.8 302 40.7
AUR62034519 Chenopodium quinoa HOM05D007079 ORTHO05D009006 9.5e-49 198.4 169 58.6
Cre14.g628500 Chlamydomonas reinhardtii HOM05D007079 ORTHO05D009006 4.9e-45 186.0 372 35.5
CBR_g1049 Chara braunii HOM05D007079 ORTHO05D009006 1.2e-40 171.4 393 31.6
Actinidia22515 Actinidia chinensis HOM05D007079 ORTHO05D009006 3.9e-34 149.8 190 43.2
SEGI_24775 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 1.0e-26 125.2 107 56.1
Os01g0261500 Oryza sativa ssp. japonica HOM05D007079 ORTHO05D009006 1.5e-25 121.3 106 52.8
MCO16G171 Micromonas commoda HOM05D007079 ORTHO05D009006 1.9e-25 120.9 215 34.9
PRCOL_00000559 Prasinoderma coloniale HOM05D007079 ORTHO05D009006 3.6e-24 116.7 324 30.2
FAN20G1265 Fragaria x ananassa HOM05D007079 ORTHO05D009006 1.5e-22 111.3 123 47.2
SEGI_21203 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 1.4e-20 104.8 126 44.4
CSS0043977 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D043334 1.1e-15 88.6 101 48.5
COL.COLO4_19820 Corchorus olitorius HOM05D001041 ORTHO05D000846 1.2e-14 85.1 58 74.1


User provided reference genes

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