Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 1.0e-74 283.5 158 100.0
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 2.7e-64 248.8 158 91.1
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 4.7e-64 248.1 158 89.9
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 7.9e-64 247.3 158 89.2
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 5.1e-63 244.6 158 88.6
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 5.1e-63 244.6 158 89.2
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 3.3e-62 241.9 160 87.5
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 3.8e-58 228.4 162 82.7
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 1.5e-57 226.5 161 80.7
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 7.2e-57 224.2 160 83.1
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 2.1e-56 222.6 160 77.5
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 3.6e-56 221.9 160 81.9
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 1.4e-55 219.9 159 82.4
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 2.3e-55 219.2 162 80.9
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 4.0e-55 218.4 161 78.3
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 5.2e-55 218.0 166 79.5
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 6.7e-55 217.6 151 81.5
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 8.8e-55 217.2 159 80.5
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 2.0e-54 216.1 161 78.3
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 5.7e-54 214.5 169 76.3
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 7.5e-54 214.2 158 79.1
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 9.7e-54 213.8 167 75.4
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 1.7e-53 213.0 162 79.0
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 4.8e-53 211.5 160 79.4
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 4.8e-53 211.5 161 77.0
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 2.4e-52 209.1 151 80.1
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 2.4e-52 209.1 159 76.7
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 1.6e-51 206.5 158 75.9
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 3.5e-51 205.3 159 74.8
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 4.5e-51 204.9 160 76.9
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 5.9e-51 204.5 163 78.5
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 1.0e-50 203.8 157 77.1
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 1.3e-50 203.4 159 74.8
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 2.2e-50 202.6 152 79.6
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 2.9e-50 202.2 157 75.8
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 5.0e-50 201.4 197 64.5
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 8.5e-50 200.7 159 78.0
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 1.5e-49 199.9 162 78.4
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 1.5e-49 199.9 149 78.5
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 1.5e-49 199.9 158 73.4
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 3.2e-49 198.7 159 74.2
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 1.6e-48 196.4 157 74.5
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 8.8e-47 190.7 158 72.2
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 2.0e-46 189.5 152 76.3
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 3.4e-46 188.7 161 70.8
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 7.5e-46 187.6 169 72.2
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 1.3e-45 186.8 154 76.6
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 1.3e-45 186.8 151 75.5
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 2.2e-45 186.0 161 70.2
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 2.8e-45 185.7 152 72.4
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 2.8e-45 185.7 164 71.3
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 1.1e-44 183.7 159 69.2
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 1.1e-44 183.7 154 72.7
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 3.1e-44 182.2 159 69.2
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 5.4e-44 181.4 155 72.9
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 7.0e-44 181.0 160 69.4
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 7.0e-44 181.0 161 70.2
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 1.6e-43 179.9 150 76.0
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 2.7e-43 179.1 124 81.5
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 4.5e-43 178.3 161 69.6
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 7.7e-43 177.6 159 67.9
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 1.0e-42 177.2 198 58.1
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 2.9e-42 175.6 152 68.4
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 3.8e-42 175.3 159 67.9
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 3.8e-42 175.3 149 71.8
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 8.5e-42 174.1 159 70.4
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 8.5e-42 174.1 166 67.5
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 1.5e-41 173.3 159 67.3
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 1.9e-41 172.9 149 71.1
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 7.2e-41 171.0 161 65.2
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 1.2e-40 170.2 158 67.7
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 2.7e-40 169.1 160 66.2
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 4.7e-40 168.3 161 70.2
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 1.8e-39 166.4 194 47.9
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 3.0e-39 165.6 156 70.5
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 8.8e-39 164.1 160 66.2
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 1.5e-38 163.3 186 50.5
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 3.4e-38 162.2 118 80.5
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 7.5e-38 161.0 175 56.0
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 9.8e-38 160.6 154 66.9
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 9.8e-38 160.6 154 64.3
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 9.8e-38 160.6 154 65.6
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 1.3e-37 160.2 153 66.0
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 1.7e-37 159.8 152 65.1
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 2.8e-37 159.1 152 65.1
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 2.8e-37 159.1 151 68.9
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 3.7e-37 158.7 153 65.4
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 8.3e-37 157.5 170 64.7
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 1.8e-36 156.4 154 64.9
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 7.7e-35 151.0 150 66.0
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 2.5e-33 146.0 124 67.7
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 5.6e-33 144.8 124 68.5
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 4.7e-32 141.7 134 65.7
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 1.0e-31 140.6 103 72.8
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 1.4e-31 140.2 154 61.7
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 5.2e-31 138.3 119 71.4
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 2.6e-30 136.0 109 67.0
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 7.5e-30 134.4 155 47.7
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 1.3e-29 133.7 122 57.4
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 5.9e-27 124.8 148 49.3
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 5.0e-26 121.7 124 62.9
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 1.6e-24 116.7 100 64.0
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 9.2e-20 100.9 91 61.5
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 4.3e-17 92.0 155 40.0
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 1.2e-16 90.5 94 52.1
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 6.8e-15 84.7 57 75.4
FAN27G0088 Fragaria x ananassa HOM05D007166 ORTHO05D009039 1.6e-11 73.6 56 67.9
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 5.1e-10 68.6 60 53.3
EL10Ac4g08279 Beta vulgaris HOM05D007166 ORTHO05D009039 5.6e-09 65.1 67 56.7
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 1.2e-08 63.9 96 37.5


User provided reference genes

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