Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 0.0e+00 1546.9 794 100.0
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 0.0e+00 1091.6 800 74.2
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 7.3e-299 1030.4 808 71.0
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 1.1e-267 926.8 723 71.8
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 7.1e-153 545.4 803 46.6
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 2.4e-145 520.4 811 45.1
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 1.3e-143 514.6 810 43.7
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 1.3e-141 508.1 804 44.4
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 4.8e-141 506.1 813 44.5
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 8.1e-141 505.4 415 67.5
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 3.2e-137 493.4 812 44.2
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 4.3e-126 456.4 816 41.3
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 3.7e-125 453.4 777 42.2
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 6.9e-124 449.1 812 41.1
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 3.4e-123 446.8 812 43.0
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 8.8e-119 432.2 760 42.4
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 4.3e-118 429.9 840 40.0
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.1e-116 425.2 836 38.6
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 2.4e-116 424.1 812 40.9
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 1.2e-115 421.8 716 43.6
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 4.5e-115 419.9 646 45.7
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 4.7e-112 409.8 685 43.8
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 9.7e-110 402.1 784 40.6
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 1.8e-108 397.9 831 40.1
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 2.2e-106 391.0 755 40.8
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 8.5e-106 389.0 693 41.0
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 1.1e-105 388.7 312 69.2
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 7.2e-105 386.0 793 40.2
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 2.6e-102 377.5 824 39.7
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 7.0e-100 369.4 803 38.9
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 1.6e-99 368.2 585 45.6
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.7e-98 364.8 837 37.6
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.2e-93 347.8 845 36.8
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 3.5e-91 340.5 741 38.9
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 5.9e-91 339.7 747 37.6
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 2.5e-89 334.3 685 38.7
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 1.5e-86 325.1 683 39.1
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 3.4e-86 323.9 812 35.8
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 2.1e-80 304.7 806 35.4
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 5.7e-78 296.6 721 36.6
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 5.4e-76 290.0 775 36.4
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 9.2e-76 289.3 769 35.4
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 1.2e-75 288.9 773 36.0
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 2.7e-75 287.7 773 34.8
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 2.9e-74 284.3 799 32.7
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 1.8e-71 275.0 815 34.5
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 5.2e-71 273.5 743 35.8
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 8.9e-71 272.7 824 34.6
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 2.0e-70 271.6 772 34.1
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 1.7e-69 268.5 773 33.8
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 4.1e-68 263.8 819 33.7
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 7.0e-68 263.1 742 34.5
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 2.7e-67 261.2 690 34.6
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 3.0e-66 257.7 802 32.2
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 9.5e-65 252.7 797 33.5
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 9.5e-65 252.7 760 32.9
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.4e-63 248.8 764 31.9
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 1.8e-63 248.4 728 32.8
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 1.7e-61 241.9 738 33.2
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 1.9e-60 238.4 683 34.0
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 2.1e-59 235.0 787 31.6
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 1.5e-57 228.8 682 33.0
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 4.0e-55 220.7 684 32.5
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 2.6e-54 218.0 679 32.1
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.3e-53 215.7 628 34.2
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 2.2e-53 214.9 748 32.4
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 1.1e-52 212.6 685 33.0
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 1.9e-52 211.8 708 29.8
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 1.9e-52 211.8 696 30.7
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 9.2e-52 209.5 758 30.2
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 2.7e-51 208.0 680 31.6
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 1.0e-50 206.1 688 31.5
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 2.1e-48 198.4 571 35.6
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 2.8e-48 198.0 712 31.7
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 4.7e-48 197.2 696 30.7
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 4.7e-48 197.2 778 28.1
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 8.1e-48 196.4 673 32.4
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 1.5e-46 192.2 630 31.1
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 5.4e-44 183.7 443 36.3
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 1.6e-40 172.2 748 28.3
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 2.4e-39 168.3 588 31.6
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 1.1e-36 159.5 635 29.4
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 3.2e-36 157.9 640 29.5
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 9.3e-36 156.4 644 29.3
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 4.6e-35 154.1 327 40.4
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 5.6e-33 147.1 605 29.8
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 8.1e-32 143.3 364 37.4
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 1.2e-30 139.4 681 27.2
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 4.5e-30 137.5 755 27.8
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 1.3e-29 136.0 679 29.3
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 1.1e-28 132.9 228 39.9
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 1.2e-27 129.4 697 28.6
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 8.7e-26 123.2 678 28.0
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 2.4e-23 115.2 555 27.7
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 4.0e-23 114.4 646 26.3
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 2.6e-22 111.7 696 27.4
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 1.1e-20 106.3 715 26.7
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 3.0e-18 98.2 288 33.0
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 8.7e-18 96.7 565 26.5
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 1.1e-17 96.3 269 31.6
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 2.8e-16 91.7 708 24.7
Atru.chr13.298 Acer truncatum HOM05D007378 ORTHO05D007577 2.0e-14 85.5 104 48.1
ATR0152G004 Amborella trichopoda HOM05D007378 ORTHO05D007577 3.8e-13 81.3 404 27.7
Atru.chr13.297 Acer truncatum HOM05D007378 ORTHO05D007577 1.2e-11 76.3 98 49.0
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 1.6e-11 75.9 142 40.8
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 2.7e-11 75.1 213 33.8
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 3.9e-10 71.2 182 35.7
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 3.9e-10 71.2 143 39.2
Lsat_1_v5_gn_2_9361 Lactuca sativa HOM05D037282 ORTHO05D035104 5.1e-10 70.9 125 38.4
BcaC08g47058 Brassica carinata HOM05D010473 ORTHO05D007577 3.3e-09 68.2 180 37.8
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 2.8e-08 65.1 245 31.4
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 4.8e-08 64.3 198 34.3
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 8.2e-08 63.5 200 34.5
A07p41260 Brassica napus HOM05D010473 ORTHO05D007577 5.3e-07 60.8 555 24.5
CSS0034917 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 6.9e-07 60.5 151 35.1
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 9.0e-07 60.1 200 34.0
SGA_v2.0_scaffold11G05915 Striga asiatica HOM05D007378 ORTHO05D007577 1.5e-06 59.3 619 23.9
BolC6t40007H Brassica oleracea HOM05D010473 ORTHO05D007577 2.0e-06 58.9 530 24.9
ECA238G3204 Erigeron canadensis HOM05D037282 ORTHO05D035104 7.7e-06 57.0 152 31.6


User provided reference genes

Program Settings