Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 6.8e-170 600.5 291 100.0
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 9.3e-143 510.4 288 85.4
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 2.5e-140 502.3 288 84.7
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 2.6e-137 492.3 288 83.3
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 1.3e-136 490.0 288 83.0
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 2.9e-136 488.8 288 83.0
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 1.3e-125 453.4 288 75.7
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 1.1e-124 450.3 289 74.7
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 4.3e-124 448.4 288 75.3
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 4.0e-122 441.8 289 75.1
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 5.3e-122 441.4 288 72.9
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 6.9e-122 441.0 288 73.6
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 1.5e-121 439.9 289 73.7
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 1.7e-120 436.4 288 72.2
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 2.2e-120 436.0 288 73.6
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 1.5e-116 423.3 288 68.8
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 2.8e-115 419.1 288 69.4
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 8.2e-115 417.5 288 71.2
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 8.2e-115 417.5 287 68.6
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 2.0e-113 412.9 320 65.0
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 5.9e-113 411.4 288 67.4
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 1.4e-111 406.8 289 72.3
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 1.9e-111 406.4 288 67.7
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 5.5e-111 404.8 288 67.4
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 5.5e-111 404.8 288 69.4
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 6.1e-110 401.4 287 67.6
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 6.7e-109 397.9 285 69.1
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 1.1e-108 397.1 286 66.8
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 2.5e-108 396.0 286 65.7
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 4.3e-108 395.2 288 66.7
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 4.3e-108 395.2 287 66.2
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 5.7e-108 394.8 287 65.9
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 7.4e-108 394.4 285 68.4
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 9.7e-108 394.0 287 66.9
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 9.7e-108 394.0 287 66.9
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 9.7e-108 394.0 287 65.9
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 4.8e-107 391.7 286 65.7
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 6.3e-107 391.3 288 65.6
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 3.1e-106 389.0 287 65.5
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 4.1e-106 388.7 265 71.3
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 4.1e-106 388.7 335 58.8
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 5.3e-106 388.3 297 64.3
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 9.1e-106 387.5 287 65.5
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 2.0e-105 386.3 286 64.7
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 3.4e-105 385.6 265 70.6
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 1.0e-104 384.0 288 64.6
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 1.7e-104 383.3 289 64.7
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 3.8e-104 382.1 289 63.7
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 8.5e-104 380.9 306 59.8
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 1.4e-103 380.2 288 64.9
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 4.2e-103 378.6 287 62.7
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 5.5e-103 378.3 287 65.5
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 9.4e-103 377.5 287 64.8
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 1.2e-102 377.1 288 63.5
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 1.2e-102 377.1 288 63.9
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 1.6e-102 376.7 289 64.7
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 1.6e-102 376.7 281 66.2
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 2.7e-102 375.9 287 64.1
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 3.6e-102 375.6 288 63.5
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 7.9e-102 374.4 288 63.5
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 3.9e-101 372.1 289 63.0
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 3.9e-101 372.1 287 60.3
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 5.1e-101 371.7 289 63.0
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 6.7e-101 371.3 287 62.0
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 6.7e-101 371.3 289 62.6
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 8.8e-101 370.9 288 62.2
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 1.1e-100 370.5 287 61.7
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 4.4e-100 368.6 288 62.2
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 7.4e-100 367.9 288 62.2
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 1.3e-99 367.1 287 61.0
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 1.3e-99 367.1 288 62.5
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 1.3e-99 367.1 287 59.9
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 2.2e-99 366.3 288 61.8
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 2.2e-99 366.3 289 63.3
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 2.8e-99 365.9 287 59.9
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 4.8e-99 365.2 251 70.1
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 3.1e-98 362.5 280 60.0
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 3.1e-98 362.5 289 62.3
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 3.1e-98 362.5 289 62.3
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 7.0e-98 361.3 287 61.3
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 1.7e-96 356.7 295 57.6
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 2.2e-96 356.3 283 60.4
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 5.0e-96 355.1 283 60.8
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 1.1e-95 354.0 282 60.3
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 1.9e-95 353.2 287 61.3
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 2.7e-94 349.4 269 63.9
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 1.0e-93 347.4 256 66.4
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 1.4e-93 347.1 292 57.2
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 1.5e-92 343.6 287 58.5
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 2.8e-91 339.3 287 58.5
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 1.6e-89 333.6 263 63.1
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 1.3e-88 330.5 257 61.1
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 1.6e-86 323.6 288 55.6
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 2.6e-84 316.2 290 55.5
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 3.3e-84 315.8 284 54.6
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 7.0e-82 308.1 287 53.0
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 3.5e-81 305.8 287 55.1
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 4.5e-81 305.4 287 53.7
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 1.1e-79 300.8 290 53.4
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 1.0e-77 294.3 287 51.2
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 2.3e-77 293.1 288 50.7
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 2.3e-77 293.1 302 52.0
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 1.2e-76 290.8 284 53.9
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 2.4e-74 283.1 186 75.3
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 5.0e-72 275.4 285 49.1
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 3.3e-71 272.7 167 77.8
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 9.5e-63 244.6 287 48.4
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 6.8e-61 238.4 295 43.4
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 8.9e-61 238.0 196 59.7
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 1.2e-57 227.6 286 43.0
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 2.7e-57 226.5 280 41.8
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 1.1e-53 214.5 169 59.8
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 1.4e-53 214.2 284 39.8
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 1.3e-51 207.6 133 75.2
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 5.2e-45 185.7 123 70.7
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 1.7e-43 180.6 308 32.8
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 3.0e-40 169.9 151 53.0
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 5.1e-32 142.5 91 70.3
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 2.1e-30 137.1 112 58.0
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.3e-27 127.9 199 41.2
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 4.9e-27 125.9 119 53.8
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 2.4e-13 80.5 47 80.9
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 3.8e-11 73.2 77 49.4


User provided reference genes

Program Settings