Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_25087 Corchorus olitorius HOM05D005057 ORTHO05D006570 3.1e-44 181.4 91 100.0
Gohir.D06G136700 Gossypium hirsutum HOM05D005057 ORTHO05D006570 1.4e-33 146.0 74 91.9
Gorai.010G158900 Gossypium raimondii HOM05D005057 ORTHO05D006570 1.4e-33 146.0 74 91.9
Duzib160G0357 Durio zibethinus HOM05D005057 ORTHO05D006570 4.2e-33 144.4 73 91.8
Gohir.A06G130800 Gossypium hirsutum HOM05D005057 ORTHO05D006570 9.3e-33 143.3 74 90.5
Thecc.06G172400 Theobroma cacao HOM05D005057 ORTHO05D006570 9.3e-33 143.3 74 90.5
Ciclev10014965m.g Citrus clementina HOM05D005057 ORTHO05D006570 1.3e-31 139.4 74 86.5
ClCG03G007800 Citrullus lanatus HOM05D005057 ORTHO05D006570 3.9e-31 137.9 81 80.2
Sed0014368 Sechium edule HOM05D005057 ORTHO05D006570 6.7e-31 137.1 81 77.8
Actinidia16804 Actinidia chinensis HOM05D005057 ORTHO05D006570 1.5e-30 136.0 74 83.8
MD10G1281300 Malus domestica HOM05D005057 ORTHO05D006570 2.5e-30 135.2 74 83.8
Dinv04618 Davidia involucrata HOM05D005057 ORTHO05D006570 5.6e-30 134.0 74 82.4
CANSAT35G0522 Cannabis sativa HOM05D005057 ORTHO05D006570 1.3e-29 132.9 74 82.4
FAN07G2484 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.3e-29 132.9 74 82.4
FvH4_3g07940 Fragaria vesca HOM05D005057 ORTHO05D006570 1.6e-29 132.5 74 81.1
FvH4_4g20380 Fragaria vesca HOM05D005057 ORTHO05D006570 1.6e-29 132.5 74 82.4
PSO782G3653 Papaver somniferum HOM05D005057 ORTHO05D006570 1.6e-29 132.5 74 82.4
Ca_30957_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 2.1e-29 132.1 83 72.3
Haze_06250 Corylus avellana HOM05D005057 ORTHO05D006570 2.1e-29 132.1 74 81.1
Hma1.2p1_0155F.1_g068170 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 2.1e-29 132.1 74 82.4
PSO063G4235 Papaver somniferum HOM05D005057 ORTHO05D006570 2.1e-29 132.1 74 82.4
Prupe.4G059900 Prunus persica HOM05D005057 ORTHO05D006570 2.1e-29 132.1 74 81.1
Rhsim13G0191300 Rhododendron simsii HOM05D005057 ORTHO05D006570 2.8e-29 131.7 74 81.1
THA.LOC104814250 Tarenaya hassleriana HOM05D005057 ORTHO05D006570 3.7e-29 131.3 74 78.4
vmacro03932 Vaccinium macrocarpon HOM05D005057 ORTHO05D006570 3.7e-29 131.3 74 81.1
GSVIVG01021196001 Vitis vinifera HOM05D005057 ORTHO05D006570 3.7e-29 131.3 74 79.7
MELO3C002642.2 Cucumis melo HOM05D005057 ORTHO05D006570 4.8e-29 131.0 81 76.5
CsaV3_1G033430 Cucumis sativus L. HOM05D005057 ORTHO05D006570 4.8e-29 131.0 74 79.7
Aqoxy4G00443 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 6.2e-29 130.6 74 81.1
Ca_00428_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 6.2e-29 130.6 80 76.2
Lj6g0017686 Lotus japonicus HOM05D005057 ORTHO05D006570 6.2e-29 130.6 76 77.6
PGR004G2757 Punica granatum HOM05D005057 ORTHO05D006570 6.2e-29 130.6 74 81.1
Lalb_Chr15g0089481 Lupinus albus HOM05D005057 ORTHO05D006570 8.2e-29 130.2 74 79.7
Lj2A297G103 Lonicera japonica HOM05D005057 ORTHO05D006570 1.1e-28 129.8 74 79.7
RcHm_v2.0_Chr5g0010551 Rosa chinensis HOM05D005057 ORTHO05D006570 1.4e-28 129.4 74 78.4
Atru.chr10.1683 Acer truncatum HOM05D005057 ORTHO05D006570 1.8e-28 129.0 74 77.0
BcaB02g10615 Brassica carinata HOM05D005057 ORTHO05D006570 1.8e-28 129.0 74 78.4
Cpa.g.sc7.56 Carica papaya HOM05D005057 ORTHO05D006570 1.8e-28 129.0 74 79.7
CDE10G0488 Ceratophyllum demersum HOM05D005057 ORTHO05D006570 1.8e-28 129.0 79 75.9
Nitab4.5_0003322g0070 Nicotiana tabacum HOM05D005057 ORTHO05D006570 1.8e-28 129.0 74 78.4
Sp4g16440 Schrenkiella parvula HOM05D005057 ORTHO05D006570 1.8e-28 129.0 74 78.4
A05p11560 Brassica napus HOM05D005057 ORTHO05D006570 2.4e-28 128.6 74 78.4
C04p15030 Brassica napus HOM05D005057 ORTHO05D006570 2.4e-28 128.6 74 78.4
BraA05t20104Z Brassica rapa HOM05D005057 ORTHO05D006570 2.4e-28 128.6 74 78.4
Os01g0613900 Oryza sativa ssp. japonica HOM05D005057 ORTHO05D006570 2.4e-28 128.6 74 77.0
TPR.G30010 Trifolium pratense HOM05D005057 ORTHO05D006570 2.4e-28 128.6 80 75.0
AL4G30000 Arabidopsis lyrata HOM05D005057 ORTHO05D006570 3.1e-28 128.3 74 78.4
AT2G34090 Arabidopsis thaliana HOM05D005057 ORTHO05D006570 3.1e-28 128.3 74 78.4
MSTRG.13217 Avicennia marina HOM05D005057 ORTHO05D006570 3.1e-28 128.3 74 78.4
Nitab4.5_0000681g0230 Nicotiana tabacum HOM05D005057 ORTHO05D006570 3.1e-28 128.3 74 78.4
Ah.09g233650 Amaranthus hybridus HOM05D005057 ORTHO05D006570 4.0e-28 127.9 74 77.0
EL10Ac8g20510 Beta vulgaris HOM05D005057 ORTHO05D006570 4.0e-28 127.9 74 77.0
CiPaw.09G069000 Carya illinoinensis HOM05D005057 ORTHO05D006570 4.0e-28 127.9 74 79.7
Migut.H01447 Erythranthe guttata HOM05D005057 ORTHO05D006570 4.0e-28 127.9 74 78.4
Thhalv10016658m.g Eutrema salsugineum HOM05D005057 ORTHO05D006570 4.0e-28 127.9 74 78.4
Manes.16G037800 Manihot esculenta HOM05D005057 ORTHO05D006570 4.0e-28 127.9 74 78.4
Eucgr.D00512 Eucalyptus grandis HOM05D005057 ORTHO05D006570 5.3e-28 127.5 74 77.0
Nn1g09100 Nelumbo nucifera HOM05D005057 ORTHO05D006570 5.3e-28 127.5 74 79.7
Medtr2g015860 Medicago truncatula HOM05D005057 ORTHO05D006570 6.9e-28 127.1 80 75.0
Carub.0004s1572 Capsella rubella HOM05D005057 ORTHO05D006570 9.0e-28 126.7 74 77.0
CARHR128190 Cardamine hirsuta HOM05D005057 ORTHO05D006570 9.0e-28 126.7 74 77.0
Zm00001eb162010 Zea mays HOM05D005057 ORTHO05D006570 9.0e-28 126.7 74 74.3
Glyma.13G230500 Glycine max HOM05D005057 ORTHO05D006570 1.2e-27 126.3 74 77.0
QL05p046461 Quercus lobata HOM05D005057 ORTHO05D006570 1.2e-27 126.3 74 77.0
Aa31LG9G13900 Aethionema arabicum HOM05D005057 ORTHO05D006570 1.5e-27 125.9 74 77.0
arahy.Tifrunner.gnm1.ann1.9TM733 Arachis hypogaea HOM05D005057 ORTHO05D006570 1.5e-27 125.9 74 74.3
arahy.Tifrunner.gnm1.ann1.E17GNY Arachis hypogaea HOM05D005057 ORTHO05D006570 1.5e-27 125.9 74 74.3
MBI06_g25988_MAGBIO Magnolia biondii HOM05D005057 ORTHO05D006570 1.5e-27 125.9 83 74.7
Sopen02g021880 Solanum pennellii HOM05D005057 ORTHO05D006570 1.5e-27 125.9 74 77.0
Psat1g199000 Pisum sativum HOM05D005057 ORTHO05D006570 2.0e-27 125.6 80 75.0
Potri.011G065000 Populus trichocarpa HOM05D005057 ORTHO05D006570 2.6e-27 125.2 74 74.3
Sabra11G0046800 Salix brachista HOM05D005057 ORTHO05D006570 2.6e-27 125.2 74 74.3
ATR0602G189 Amborella trichopoda HOM05D005057 ORTHO05D006570 3.4e-27 124.8 83 73.5
CAN.G370.63 Capsicum annuum HOM05D005057 ORTHO05D006570 3.4e-27 124.8 74 77.0
VMungo0540G0206 Vigna mungo HOM05D005057 ORTHO05D006570 4.5e-27 124.4 74 75.7
Cc02_g14710 Coffea canephora HOM05D005057 ORTHO05D006570 7.6e-27 123.6 74 75.7
Lalb_Chr18g0059151 Lupinus albus HOM05D005057 ORTHO05D006570 7.6e-27 123.6 74 77.0
Oeu041787.3 Olea europaea HOM05D005057 ORTHO05D006570 7.6e-27 123.6 74 78.4
Sc12g0008060 Simmondsia chinensis HOM05D005057 ORTHO05D006570 7.6e-27 123.6 74 75.7
Phvul.006G176700 Phaseolus vulgaris HOM05D005057 ORTHO05D006570 1.3e-26 122.9 74 75.7
SalBow7G0088 Salvia bowleyana HOM05D005057 ORTHO05D006570 1.7e-26 122.5 74 75.7
ECA236G3111 Erigeron canadensis HOM05D005057 ORTHO05D006570 2.2e-26 122.1 74 77.0
TWI38G0714 Tripterygium wilfordii HOM05D005057 ORTHO05D006570 2.2e-26 122.1 82 74.4
AUR62031175 Chenopodium quinoa HOM05D005057 ORTHO05D006570 2.9e-26 121.7 74 75.7
HanXRQChr13g0397391 Helianthus annuus HOM05D005057 ORTHO05D006570 8.4e-26 120.2 74 74.3
Solyc02g076950.2 Solanum lycopersicum HOM05D005057 ORTHO05D006570 8.4e-26 120.2 74 74.3
DCAR_004016 Daucus carota HOM05D005057 ORTHO05D006570 2.5e-25 118.6 81 70.4
Mapoly0152s0011 Marchantia polymorpha HOM05D005057 ORTHO05D006570 2.5e-25 118.6 74 71.6
SGA_v2.0_scaffold307G48045 Striga asiatica HOM05D005057 ORTHO05D006570 2.5e-25 118.6 84 67.9
AagrBONN_evm.TU.Sc2ySwM_344.2851 Anthoceros agrestis HOM05D005057 ORTHO05D006570 3.2e-25 118.2 74 71.6
BolC4t23078H Brassica oleracea HOM05D005057 ORTHO05D006570 3.2e-25 118.2 79 73.4
SMO142G0032 Selaginella moellendorffii HOM05D005057 ORTHO05D006570 3.2e-25 118.2 72 75.0
Aqoxy12s001 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 7.9e-24 113.6 66 80.3
Pp3c16_13000 Physcomitrium patens HOM05D005057 ORTHO05D006570 1.5e-22 109.4 74 67.6
Cre01.g033700 Chlamydomonas reinhardtii HOM05D005057 ORTHO05D006570 2.6e-19 98.6 77 62.3
MD16G1033100 Malus domestica HOM05D005057 ORTHO05D006570 5.0e-18 94.4 57 77.2
MCO11G641 Micromonas commoda HOM05D005057 ORTHO05D006570 6.5e-18 94.0 78 55.1
PRCOL_00006187 Prasinoderma coloniale HOM05D005057 ORTHO05D006570 1.1e-17 93.2 75 58.7
MD05G1302500 Malus domestica HOM05D005057 ORTHO05D006570 1.2e-16 89.7 57 73.7
BcaC04g22954 Brassica carinata HOM05D005057 ORTHO05D006570 7.9e-16 87.0 73 63.0
C09p55570 Brassica napus HOM05D005057 ORTHO05D006570 7.9e-16 87.0 73 63.0
BolC9t54241H Brassica oleracea HOM05D005057 ORTHO05D006570 7.9e-16 87.0 73 63.0
HPP92_020166 Vanilla planifolia HOM05D005057 ORTHO05D006570 1.5e-14 82.8 78 57.7
BcaC01g03610 Brassica carinata HOM05D005057 ORTHO05D019871 5.3e-12 74.3 47 70.2
TAR626G0988 Trochodendron aralioides HOM05D005057 ORTHO05D006570 5.3e-12 74.3 44 79.5
FAN11G1223 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.2e-11 73.2 46 76.1
Lsat_1_v5_gn_7_23040 Lactuca sativa HOM05D005057 ORTHO05D006570 4.5e-11 71.2 46 71.7
FAN25G1331 Fragaria x ananassa HOM05D005057 ORTHO05D006570 3.8e-10 68.2 46 69.6
COL.COLO4_31315 Corchorus olitorius HOM05D005057 ORTHO05D006570 1.1e-09 66.6 49 63.3
unitig_22.g6756 Utricularia gibba HOM05D005057 ORTHO05D006570 4.2e-09 64.7 41 70.7
AUR62036592 Chenopodium quinoa HOM05D005057 ORTHO05D006570 5.5e-09 64.3 40 75.0
BcaC01g06160 Brassica carinata HOM05D005057 ORTHO05D006570 1.2e-08 63.2 79 50.6
Hma1.2p1_0155F.1_g068180 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 2.1e-08 62.4 49 59.2
Hund21184 Selenicereus undatus HOM05D005057 ORTHO05D006570 2.1e-08 62.4 40 70.0
Glyma.14G170500 Glycine max HOM05D005057 ORTHO05D006570 6.1e-08 60.8 44 61.4
BolC4t26729H Brassica oleracea HOM05D005057 ORTHO05D006570 1.8e-07 59.3 32 87.5
BolC7t41970H Brassica oleracea HOM05D005057 ORTHO05D006570 1.8e-07 59.3 32 87.5
FAN16G2413 Fragaria x ananassa HOM05D005057 ORTHO05D006570 5.7e-06 54.3 59 50.8
BolC8t49834H Brassica oleracea HOM05D005057 ORTHO05D019871 9.7e-06 53.5 32 75.0


User provided reference genes

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