Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_25039 Corchorus olitorius HOM05D006797 ORTHO05D007696 1.6e-43 179.5 124 100.0
Duzib211G0055 Durio zibethinus HOM05D006797 ORTHO05D007696 5.9e-30 134.4 100 76.0
Gohir.A06G110200 Gossypium hirsutum HOM05D006797 ORTHO05D007696 8.5e-29 130.6 100 74.0
Gorai.010G130400 Gossypium raimondii HOM05D006797 ORTHO05D007696 1.1e-28 130.2 100 74.0
Gohir.D06G114100 Gossypium hirsutum HOM05D006797 ORTHO05D007696 7.2e-28 127.5 100 73.0
RcHm_v2.0_Chr5g0021541 Rosa chinensis HOM05D006797 ORTHO05D007696 1.7e-21 106.3 102 69.6
Ciclev10017227m.g Citrus clementina HOM05D006797 ORTHO05D007696 2.2e-21 105.9 100 65.0
TPR.G27392 Trifolium pratense HOM05D006797 ORTHO05D007696 4.2e-20 101.7 99 64.6
QL11p011767 Quercus lobata HOM05D006797 ORTHO05D007696 2.1e-19 99.4 100 61.0
Prupe.4G119300 Prunus persica HOM05D006797 ORTHO05D007696 6.1e-19 97.8 100 62.0
Ca_18220_v3 Cicer arietinum L. HOM05D006797 ORTHO05D007696 1.4e-18 96.7 99 64.6
Hund23985 Selenicereus undatus HOM05D006797 ORTHO05D007696 1.4e-18 96.7 99 64.6
EL10Ac7g17249 Beta vulgaris HOM05D006797 ORTHO05D007696 1.8e-18 96.3 99 62.6
Lalb_Chr07g0188191 Lupinus albus HOM05D006797 ORTHO05D007696 1.8e-18 96.3 99 63.6
Medtr4g094782 Medicago truncatula HOM05D006797 ORTHO05D007696 3.0e-18 95.5 99 61.6
Sc24g0002860 Simmondsia chinensis HOM05D006797 ORTHO05D007696 4.0e-18 95.1 99 59.6
CiPaw.10G107100 Carya illinoinensis HOM05D006797 ORTHO05D007696 5.2e-18 94.7 106 57.5
Glyma.05G134500 Glycine max HOM05D006797 ORTHO05D007696 5.2e-18 94.7 100 61.0
Psat7g087040 Pisum sativum HOM05D006797 ORTHO05D007696 5.2e-18 94.7 99 60.6
Atru.chr10.261 Acer truncatum HOM05D006797 ORTHO05D007696 1.5e-17 93.2 104 57.7
Phvul.002G187600 Phaseolus vulgaris HOM05D006797 ORTHO05D007696 1.5e-17 93.2 99 58.6
ClCG01G025860 Citrullus lanatus HOM05D006797 ORTHO05D007696 2.0e-17 92.8 101 63.4
Cpa.g.sc30.90 Carica papaya HOM05D006797 ORTHO05D007696 2.6e-17 92.4 101 63.4
Glyma.08G089600 Glycine max HOM05D006797 ORTHO05D007696 4.4e-17 91.7 100 62.0
TWI38G0311 Tripterygium wilfordii HOM05D006797 ORTHO05D007696 5.7e-17 91.3 99 61.6
arahy.Tifrunner.gnm1.ann1.30I9D2 Arachis hypogaea HOM05D006797 ORTHO05D007696 7.5e-17 90.9 99 59.6
arahy.Tifrunner.gnm1.ann1.3X9X11 Arachis hypogaea HOM05D006797 ORTHO05D007696 7.5e-17 90.9 99 59.6
Ah.15g091850 Amaranthus hybridus HOM05D006797 ORTHO05D007696 9.8e-17 90.5 99 60.6
MD10G1226000 Malus domestica HOM05D006797 ORTHO05D007696 9.8e-17 90.5 100 60.0
CANSAT35G2044 Cannabis sativa HOM05D006797 ORTHO05D007696 1.3e-16 90.1 100 59.0
VMungo0251G2933 Vigna mungo HOM05D006797 ORTHO05D007696 1.3e-16 90.1 99 58.6
Sed0011432 Sechium edule HOM05D006797 ORTHO05D007696 1.7e-16 89.7 101 65.3
Manes.03G071800 Manihot esculenta HOM05D006797 ORTHO05D007696 2.2e-16 89.4 102 59.8
GSVIVG01012170001 Vitis vinifera HOM05D006797 ORTHO05D007696 2.2e-16 89.4 102 55.9
MELO3C007002.2 Cucumis melo HOM05D006797 ORTHO05D007696 2.8e-16 89.0 106 58.5
Cc09_g04790 Coffea canephora HOM05D006797 ORTHO05D007696 8.3e-16 87.4 99 61.6
CsaV3_6G053080 Cucumis sativus L. HOM05D006797 ORTHO05D007696 8.3e-16 87.4 100 58.0
Nn1g05854 Nelumbo nucifera HOM05D006797 ORTHO05D007696 7.0e-15 84.3 101 55.4
TAR626G0010 Trochodendron aralioides HOM05D006797 ORTHO05D007696 1.2e-14 83.6 101 56.4
MSTRG.8842 Avicennia marina HOM05D006797 ORTHO05D007696 2.7e-14 82.4 94 60.6
CSS0049260 Camellia sinensis var. sinensis HOM05D006797 ORTHO05D007696 3.5e-14 82.0 104 55.8
FAN16G2513 Fragaria x ananassa HOM05D006797 ORTHO05D007696 4.5e-14 81.6 100 57.0
Hma1.2p1_1220F.1_g268030 Hydrangea macrophylla HOM05D006797 ORTHO05D007696 4.5e-14 81.6 104 54.8
Rhsim13G0134800 Rhododendron simsii HOM05D006797 ORTHO05D007696 5.9e-14 81.3 104 55.8
Thecc.02G002300 Theobroma cacao HOM05D006797 ORTHO05D007696 5.9e-14 81.3 68 73.5
Migut.F00519 Erythranthe guttata HOM05D006797 ORTHO05D007696 7.7e-14 80.9 99 58.6
FAN21G4013 Fragaria x ananassa HOM05D006797 ORTHO05D007696 7.7e-14 80.9 100 57.0
Lsat_1_v5_gn_3_103300 Lactuca sativa HOM05D006797 ORTHO05D007696 7.7e-14 80.9 99 55.6
FAN25G1182 Fragaria x ananassa HOM05D006797 ORTHO05D007696 1.0e-13 80.5 100 57.0
Lj4g0013366 Lotus japonicus HOM05D006797 ORTHO05D007696 1.7e-13 79.7 99 59.6
ECA248G3234 Erigeron canadensis HOM05D006797 ORTHO05D007696 2.2e-13 79.3 99 57.6
FvH4_3g13200 Fragaria vesca HOM05D006797 ORTHO05D007696 3.8e-13 78.6 100 56.0
FAN11G3985 Fragaria x ananassa HOM05D006797 ORTHO05D007696 3.8e-13 78.6 100 56.0
MBI18_g20922_MAGBIO Magnolia biondii HOM05D006797 ORTHO05D007696 3.8e-13 78.6 100 55.0
Dinv03172 Davidia involucrata HOM05D006797 ORTHO05D007696 1.1e-12 77.0 103 54.4
PGR042G0784 Punica granatum HOM05D006797 ORTHO05D007696 1.1e-12 77.0 102 52.0
HanXRQChr12g0377351 Helianthus annuus HOM05D006797 ORTHO05D007696 1.9e-12 76.3 99 53.5
CDE05G1867 Ceratophyllum demersum HOM05D006797 ORTHO05D007696 2.5e-12 75.9 99 49.5
THA.LOC104812696 Tarenaya hassleriana HOM05D006797 ORTHO05D007696 3.2e-12 75.5 107 53.3
SGA_v2.0_scaffold60G20810 Striga asiatica HOM05D006797 ORTHO05D007696 5.5e-12 74.7 99 51.5
Aqoxy3G03581 Aquilegia oxysepala HOM05D006409 ORTHO05D008250 7.2e-12 74.3 104 47.1
HPP92_013198 Vanilla planifolia HOM05D006797 ORTHO05D007696 9.4e-12 73.9 102 52.0
CAN.G809.30 Capsicum annuum HOM05D006797 ORTHO05D007696 1.2e-11 73.6 101 60.4
Nitab4.5_0000632g0020 Nicotiana tabacum HOM05D006797 ORTHO05D007696 1.2e-11 73.6 101 58.4
SalBow3G3973 Salvia bowleyana HOM05D006797 ORTHO05D007696 1.6e-11 73.2 99 53.5
DCAR_001265 Daucus carota HOM05D006797 ORTHO05D007696 2.7e-11 72.4 99 57.6
SGA_v2.0_scaffold44G16576 Striga asiatica HOM05D001006 ORTHO05D000868 2.7e-11 72.4 99 51.5
Dinv02379 Davidia involucrata HOM05D006797 ORTHO05D007696 3.6e-11 72.0 100 54.0
Oeu036765.2 Olea europaea HOM05D006797 ORTHO05D007696 4.7e-11 71.6 105 49.5
Os04g0611300 Oryza sativa ssp. japonica HOM05D006797 ORTHO05D007696 4.7e-11 71.6 99 48.5
vmacro03563 Vaccinium macrocarpon HOM05D006797 ORTHO05D007696 4.7e-11 71.6 68 69.1
Nitab4.5_0003902g0030 Nicotiana tabacum HOM05D006797 ORTHO05D007696 8.0e-11 70.9 101 57.4
ATR0763G022 Amborella trichopoda HOM05D006797 ORTHO05D007696 1.4e-10 70.1 102 50.0
Potri.003G155400 Populus trichocarpa HOM05D006797 ORTHO05D007696 1.4e-10 70.1 101 51.5
unitig_37.g11921 Utricularia gibba HOM05D006797 ORTHO05D007696 1.4e-10 70.1 70 60.0
AUR62042807 Chenopodium quinoa HOM05D006797 ORTHO05D007696 2.3e-10 69.3 99 50.5
PSO675G1942 Papaver somniferum HOM05D006797 ORTHO05D007696 3.0e-10 68.9 99 52.5
Zm00001eb071100 Zea mays HOM05D006797 ORTHO05D007696 3.0e-10 68.9 105 47.6
Haze_05201 Corylus avellana HOM05D000001 ORTHO05D010268 4.0e-10 68.6 53 75.5
Haze_15747 Corylus avellana HOM05D006797 ORTHO05D007696 4.0e-10 68.6 52 76.9
Zm00001eb430680 Zea mays HOM05D006797 ORTHO05D007696 5.2e-10 68.2 99 48.5
Zm00001eb442340 Zea mays HOM05D006797 ORTHO05D007696 5.2e-10 68.2 99 48.5
PSO541G4265 Papaver somniferum HOM05D006797 ORTHO05D007696 8.8e-10 67.4 99 51.5
Sabra03G0112800 Salix brachista HOM05D006797 ORTHO05D007696 1.2e-09 67.0 58 74.1
Solyc02g082020.3 Solanum lycopersicum HOM05D006797 ORTHO05D007696 1.2e-09 67.0 102 56.9
Aa31LG6G12300 Aethionema arabicum HOM05D006797 ORTHO05D007696 3.4e-09 65.5 103 51.5
BcaB07g32754 Brassica carinata HOM05D006797 ORTHO05D007696 3.4e-09 65.5 104 51.9
Sopen02g026660 Solanum pennellii HOM05D006797 ORTHO05D007696 3.4e-09 65.5 102 54.9
Peaxi162Scf00036g02019 Petunia axillaris HOM05D006797 ORTHO05D007696 4.4e-09 65.1 96 55.2
BcaC05g27127 Brassica carinata HOM05D006797 ORTHO05D007696 5.7e-09 64.7 104 51.0
C05p30120 Brassica napus HOM05D006797 ORTHO05D007696 5.7e-09 64.7 104 51.0
BcaC07g37796 Brassica carinata HOM05D006797 ORTHO05D007696 9.8e-09 63.9 101 50.5
A08p10910 Brassica napus HOM05D006797 ORTHO05D007696 9.8e-09 63.9 101 50.5
PGSC0003DMG400007337 Solanum tuberosum HOM05D006797 ORTHO05D007696 9.8e-09 63.9 101 54.5
AL1G45170 Arabidopsis lyrata HOM05D006797 ORTHO05D007696 1.7e-08 63.2 103 51.5
AT1G30880 Arabidopsis thaliana HOM05D006797 ORTHO05D007696 1.7e-08 63.2 104 54.8
A07p09570 Brassica napus HOM05D006797 ORTHO05D007696 1.7e-08 63.2 101 51.5
BraA07t28751Z Brassica rapa HOM05D006797 ORTHO05D007696 1.7e-08 63.2 101 51.5
Carub.0001s2922 Capsella rubella HOM05D006797 ORTHO05D007696 1.7e-08 63.2 102 52.0
A09p35270 Brassica napus HOM05D006797 ORTHO05D007696 2.8e-08 62.4 101 49.5
Thhalv10009126m.g Eutrema salsugineum HOM05D006797 ORTHO05D007696 2.8e-08 62.4 103 51.5
BolC8t48187H Brassica oleracea HOM05D006797 ORTHO05D007696 3.7e-08 62.0 102 49.0
Sp1g26780 Schrenkiella parvula HOM05D006797 ORTHO05D007696 8.3e-08 60.8 101 47.5
BolC7t41975H Brassica oleracea HOM05D006797 ORTHO05D007696 1.4e-07 60.1 103 48.5
BraA08t33088Z Brassica rapa HOM05D006797 ORTHO05D007696 1.4e-07 60.1 102 49.0
BraA09t39054Z Brassica rapa HOM05D006797 ORTHO05D007696 1.4e-07 60.1 102 49.0
C07p14730 Brassica napus HOM05D006797 ORTHO05D007696 1.8e-07 59.7 103 48.5
CARHR030370 Cardamine hirsuta HOM05D006797 ORTHO05D007696 2.4e-07 59.3 105 52.4
BolC5t31749H Brassica oleracea HOM05D006797 ORTHO05D007696 3.1e-07 58.9 109 48.6
BcaB04g18200 Brassica carinata HOM05D006797 ORTHO05D007696 4.1e-07 58.5 106 51.9
Pp3c24_14860 Physcomitrium patens HOM05D006797 ORTHO05D007696 4.1e-07 58.5 104 41.3
Hma1.2p1_0747F.1_g212490 Hydrangea macrophylla HOM05D006797 ORTHO05D007696 2.7e-06 55.8 82 48.8
SMO167G0044 Selaginella moellendorffii HOM05D006797 ORTHO05D007696 2.7e-06 55.8 55 58.2
Haze_24216 Corylus avellana HOM05D006797 ORTHO05D007696 7.7e-06 54.3 111 42.3


User provided reference genes

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