Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_24973 Corchorus olitorius HOM05D007061 ORTHO05D009017 2.4e-187 658.7 336 100.0
Gohir.A07G044000 Gossypium hirsutum HOM05D007061 ORTHO05D009017 6.1e-146 521.2 402 69.4
Duzib213G0730 Durio zibethinus HOM05D007061 ORTHO05D009017 1.0e-145 520.4 451 64.5
Potri.010G173800 Populus trichocarpa HOM05D007061 ORTHO05D009017 8.5e-140 500.7 448 62.9
Gorai.001G051600 Gossypium raimondii HOM05D007061 ORTHO05D009017 1.9e-139 499.6 448 61.8
Gohir.D07G048400 Gossypium hirsutum HOM05D007061 ORTHO05D009017 9.4e-139 497.3 448 61.8
FAN25G0842 Fragaria x ananassa HOM05D007061 ORTHO05D009017 7.9e-138 494.2 383 68.1
Sabra10G0133700 Salix brachista HOM05D007061 ORTHO05D009017 7.9e-138 494.2 454 61.5
QL04p093744 Quercus lobata HOM05D007061 ORTHO05D009017 1.2e-133 480.3 475 56.6
Nitab4.5_0000029g0190 Nicotiana tabacum HOM05D007061 ORTHO05D009017 8.5e-132 474.2 398 64.6
THA.LOC104810275 Tarenaya hassleriana HOM05D007061 ORTHO05D009017 7.2e-131 471.1 446 57.6
FvH4_3g14100 Fragaria vesca HOM05D007061 ORTHO05D009017 2.7e-130 469.2 446 58.3
Ciclev10004974m.g Citrus clementina HOM05D007061 ORTHO05D009017 3.0e-129 465.7 450 57.6
RcHm_v2.0_Chr5g0023411 Rosa chinensis HOM05D007061 ORTHO05D009017 1.5e-128 463.4 446 58.1
Hma1.2p1_0151F.1_g067030 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 2.0e-128 463.0 443 58.7
Peaxi162Scf00452g00232 Petunia axillaris HOM05D007061 ORTHO05D009017 2.0e-128 463.0 393 62.1
TAR627G0473 Trochodendron aralioides HOM05D007061 ORTHO05D009017 2.0e-128 463.0 444 57.4
CsaV3_6G013460 Cucumis sativus L. HOM05D007061 ORTHO05D009017 3.3e-128 462.2 446 57.0
MD10G1216400 Malus domestica HOM05D007061 ORTHO05D009017 3.3e-128 462.2 440 58.6
Glyma.08G234700 Glycine max HOM05D007061 ORTHO05D009017 4.8e-127 458.4 445 56.9
Ca_23083_v3 Cicer arietinum L. HOM05D007061 ORTHO05D009017 6.3e-127 458.0 437 57.4
Lsat_1_v5_gn_7_70001 Lactuca sativa HOM05D007061 ORTHO05D009017 8.2e-127 457.6 429 58.0
PSO675G3863 Papaver somniferum HOM05D007061 ORTHO05D009017 8.2e-127 457.6 421 58.2
CiPaw.11G057200 Carya illinoinensis HOM05D007061 ORTHO05D009017 1.4e-126 456.8 446 56.5
Aqoxy2G00253 Aquilegia oxysepala HOM05D007061 ORTHO05D009017 5.3e-126 454.9 444 56.5
Nn7g38366 Nelumbo nucifera HOM05D007061 ORTHO05D009017 5.3e-126 454.9 444 58.6
PSO675G0660 Papaver somniferum HOM05D007061 ORTHO05D009017 7.0e-126 454.5 436 56.4
PGR044G2241 Punica granatum HOM05D007061 ORTHO05D009017 9.1e-126 454.1 441 56.5
Psat4g170560 Pisum sativum HOM05D007061 ORTHO05D009017 1.2e-125 453.8 438 57.1
Eucgr.K03462 Eucalyptus grandis HOM05D007061 ORTHO05D009017 1.6e-125 453.4 446 55.2
Lalb_Chr03g0031881 Lupinus albus HOM05D007061 ORTHO05D009017 1.6e-125 453.4 446 56.5
ECA240G0752 Erigeron canadensis HOM05D007061 ORTHO05D009017 2.0e-125 453.0 430 57.9
CANSAT35G1572 Cannabis sativa HOM05D007061 ORTHO05D009017 4.5e-125 451.8 446 57.2
TPR.G9404 Trifolium pratense HOM05D007061 ORTHO05D009017 4.5e-125 451.8 437 57.0
Prupe.4G128300 Prunus persica HOM05D007061 ORTHO05D009017 5.9e-125 451.4 413 59.6
ClCG02G018710 Citrullus lanatus HOM05D007061 ORTHO05D009017 1.7e-124 449.9 458 54.8
Lj3g0003258 Lotus japonicus HOM05D007061 ORTHO05D009017 1.7e-124 449.9 438 56.4
CAN.G943.59 Capsicum annuum HOM05D007061 ORTHO05D009017 6.5e-124 448.0 399 62.2
Sp1g41850 Schrenkiella parvula HOM05D007061 ORTHO05D009017 1.1e-123 447.2 424 56.6
SGA_v2.0_scaffold186G40180 Striga asiatica HOM05D007061 ORTHO05D009017 1.9e-123 446.4 409 58.9
HanXRQChr03g0080291 Helianthus annuus HOM05D007061 ORTHO05D009017 7.2e-123 444.5 426 56.6
CSS0041382 Camellia sinensis var. sinensis HOM05D007061 ORTHO05D009017 1.6e-122 443.4 414 58.7
Manes.16G047900 Manihot esculenta HOM05D007061 ORTHO05D009017 1.0e-121 440.7 432 58.1
Aa31LG10G30 Aethionema arabicum HOM05D007061 ORTHO05D009017 1.8e-121 439.9 423 55.8
FAN16G1770 Fragaria x ananassa HOM05D007061 ORTHO05D009017 1.8e-121 439.9 451 56.5
AL1G64530 Arabidopsis lyrata HOM05D007061 ORTHO05D009017 2.6e-120 436.0 435 54.5
Thhalv10011478m.g Eutrema salsugineum HOM05D007061 ORTHO05D009017 3.3e-120 435.6 434 55.3
BcaB02g10820 Brassica carinata HOM05D007061 ORTHO05D009017 1.3e-119 433.7 428 54.7
Actinidia24658 Actinidia chinensis HOM05D007061 ORTHO05D009017 2.2e-119 433.0 439 54.9
CARHR045980 Cardamine hirsuta HOM05D007061 ORTHO05D009017 6.3e-119 431.4 435 54.3
arahy.Tifrunner.gnm1.ann1.69KP4R Arachis hypogaea HOM05D007061 ORTHO05D009017 1.1e-118 430.6 432 55.1
ATR0763G190 Amborella trichopoda HOM05D007061 ORTHO05D009017 7.0e-118 427.9 446 52.9
A05p26620 Brassica napus HOM05D007061 ORTHO05D009017 9.1e-118 427.6 422 55.2
BraA05t21537Z Brassica rapa HOM05D007061 ORTHO05D009017 9.1e-118 427.6 422 55.2
C05p41210 Brassica napus HOM05D007061 ORTHO05D009017 7.7e-117 424.5 426 54.0
Atru.chr1.57 Acer truncatum HOM05D007061 ORTHO05D009017 1.7e-116 423.3 363 63.6
Lj2A10G39 Lonicera japonica HOM05D007061 ORTHO05D009017 1.9e-115 419.9 430 54.4
FAN11G3441 Fragaria x ananassa HOM05D007061 ORTHO05D009017 9.4e-115 417.5 364 61.8
GSVIVG01036723001 Vitis vinifera HOM05D007061 ORTHO05D009017 1.2e-114 417.2 388 57.7
vmacro11681 Vaccinium macrocarpon HOM05D007061 ORTHO05D009017 3.0e-113 412.5 457 51.0
unitig_37.g12195 Utricularia gibba HOM05D007061 ORTHO05D009017 5.2e-113 411.8 431 50.6
MELO3C019630.2 Cucumis melo HOM05D007061 ORTHO05D009017 2.6e-112 409.5 358 61.2
Dinv42463 Davidia involucrata HOM05D007061 ORTHO05D009017 2.6e-112 409.5 339 64.6
Zm00001eb233280 Zea mays HOM05D007061 ORTHO05D009017 1.7e-111 406.8 415 53.5
SalBow8G1251 Salvia bowleyana HOM05D007061 ORTHO05D009017 2.8e-111 406.0 543 44.2
SalBow8G1458 Salvia bowleyana HOM05D007061 ORTHO05D009017 8.3e-111 404.4 554 43.5
Phvul.011G179100 Phaseolus vulgaris HOM05D007061 ORTHO05D009017 4.1e-110 402.1 386 55.2
Nitab4.5_0002862g0050 Nicotiana tabacum HOM05D007061 ORTHO05D009017 4.5e-109 398.7 440 53.9
Cc05_g16540 Coffea canephora HOM05D007061 ORTHO05D009017 1.9e-107 393.3 349 60.5
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 8.9e-105 384.4 396 54.5
Carub.0001s4486 Capsella rubella HOM05D007061 ORTHO05D009017 2.0e-104 383.3 388 52.6
AUR62037650 Chenopodium quinoa HOM05D007061 ORTHO05D009017 1.0e-100 370.9 318 60.1
arahy.Tifrunner.gnm1.ann1.RLLR5G Arachis hypogaea HOM05D007061 ORTHO05D009017 1.5e-99 367.1 643 37.5
Thecc.07G189200 Theobroma cacao HOM05D007061 ORTHO05D009017 1.4e-97 360.5 317 63.7
BcaC05g28094 Brassica carinata HOM05D007061 ORTHO05D009017 2.9e-95 352.8 437 48.5
Migut.M01505 Erythranthe guttata HOM05D007061 ORTHO05D009017 1.3e-92 344.0 430 49.8
AagrBONN_evm.TU.Sc2ySwM_228.3482 Anthoceros agrestis HOM05D007061 ORTHO05D009017 6.6e-92 341.7 429 45.0
Pp3c22_13410 Physcomitrium patens HOM05D007061 ORTHO05D009017 1.1e-91 340.9 408 46.1
DCAR_009658 Daucus carota HOM05D007061 ORTHO05D009017 1.5e-91 340.5 306 59.5
Os02g0173700 Oryza sativa ssp. japonica HOM05D007061 ORTHO05D009017 3.3e-91 339.3 366 51.1
Mapoly0013s0085 Marchantia polymorpha HOM05D007061 ORTHO05D009017 3.6e-90 335.9 427 44.3
SMO145G0248 Selaginella moellendorffii HOM05D007061 ORTHO05D009017 2.6e-88 329.7 411 44.8
Cpa.g.sc32.92 Carica papaya HOM05D007061 ORTHO05D009017 2.5e-83 313.2 347 50.4
Sed0001021 Sechium edule HOM05D007061 ORTHO05D009017 2.1e-82 310.1 296 58.4
TWI59G0237 Tripterygium wilfordii HOM05D007061 ORTHO05D009017 2.1e-82 310.1 296 56.8
VMungo1127G1118 Vigna mungo HOM05D007061 ORTHO05D009017 5.2e-81 305.4 300 55.7
Sc03g0005020 Simmondsia chinensis HOM05D007061 ORTHO05D009017 2.7e-77 293.1 290 56.9
Haze_07765 Corylus avellana HOM05D007061 ORTHO05D009017 6.6e-68 261.9 261 57.9
BolC5t32863H Brassica oleracea HOM05D007061 ORTHO05D009017 9.6e-67 258.1 258 54.3
Rhsim06G0244100 Rhododendron simsii HOM05D007061 ORTHO05D009017 6.9e-65 251.9 201 61.7
Cre16.g649400 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 1.9e-59 233.8 441 35.6
Actinidia26210 Actinidia chinensis HOM05D007061 ORTHO05D009017 5.6e-59 232.3 163 71.2
arahy.Tifrunner.gnm1.ann1.R5CYRF Arachis hypogaea HOM05D007061 ORTHO05D009017 3.6e-58 229.6 161 75.2
AT1G54310 Arabidopsis thaliana HOM05D007061 ORTHO05D009017 2.2e-55 220.3 149 72.5
PRCOL_00003223 Prasinoderma coloniale HOM05D007061 ORTHO05D009017 5.4e-54 215.7 427 33.7
Rhsim06G0244000 Rhododendron simsii HOM05D007061 ORTHO05D009017 1.6e-53 214.2 175 66.3
SEGI_33801 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 7.6e-48 195.3 121 73.6
MD05G1238000 Malus domestica HOM05D007061 ORTHO05D009017 3.8e-47 193.0 124 75.8
MCO09G574 Micromonas commoda HOM05D007061 ORTHO05D009017 3.0e-44 183.3 456 29.4
SEGI_31810 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 3.9e-44 183.0 130 65.4
Hma1.2p1_0151F.1_g067050 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 3.7e-42 176.4 101 86.1
SGA_v2.0_scaffold112G31643 Striga asiatica HOM05D007061 ORTHO05D009017 4.2e-38 162.9 91 86.8
SGA_v2.0_scaffold60G20904 Striga asiatica HOM05D007061 ORTHO05D009017 4.2e-38 162.9 91 86.8
HPP92_028076 Vanilla planifolia HOM05D007061 ORTHO05D009017 7.9e-37 158.7 105 77.1
RcHm_v2.0_Chr1g0324361 Rosa chinensis HOM05D007061 ORTHO05D009017 1.4e-33 147.9 93 77.4
Cre09.g407900 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 5.1e-28 129.4 343 29.2
HPP92_028078 Vanilla planifolia HOM05D007061 ORTHO05D009017 7.7e-16 89.0 115 43.5
arahy.Tifrunner.gnm1.ann1.4L0SCR Arachis hypogaea HOM05D007061 ORTHO05D009017 7.2e-14 82.4 104 45.2
Lsat_1_v5_gn_4_131100 Lactuca sativa HOM05D007061 ORTHO05D004266 1.0e-12 78.6 51 68.6
MCO14G211 Micromonas commoda HOM05D027329 ORTHO05D268215 2.8e-10 70.5 118 31.4
MD05G1238100 Malus domestica HOM05D007061 ORTHO05D009017 1.2e-08 65.1 43 74.4


User provided reference genes

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