Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_24960 Corchorus olitorius HOM05D003640 ORTHO05D004439 4.3e-47 191.0 101 100.0
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.7e-31 137.5 114 72.8
Duzib068G1167 Durio zibethinus HOM05D003640 ORTHO05D004439 2.8e-30 135.2 113 69.0
Thecc.03G206700 Theobroma cacao HOM05D003640 ORTHO05D004439 6.3e-30 134.0 113 68.1
Duzib084G0116 Durio zibethinus HOM05D003640 ORTHO05D004439 3.1e-29 131.7 113 65.5
Gorai.008G265800 Gossypium raimondii HOM05D003640 ORTHO05D004439 3.3e-23 111.7 113 57.5
Gohir.D12G247700 Gossypium hirsutum HOM05D003640 ORTHO05D004439 4.3e-23 111.3 113 57.5
Gohir.A08G103800 Gossypium hirsutum HOM05D003640 ORTHO05D004439 2.2e-22 109.0 113 61.1
Gohir.D08G115200 Gossypium hirsutum HOM05D003640 ORTHO05D004439 2.2e-22 109.0 113 61.1
Gorai.004G124100 Gossypium raimondii HOM05D003640 ORTHO05D004439 2.2e-22 109.0 113 61.1
Duzib205G1657 Durio zibethinus HOM05D003640 ORTHO05D004439 1.1e-21 106.7 112 58.0
COL.COLO4_14351 Corchorus olitorius HOM05D003640 ORTHO05D004439 1.4e-21 106.3 80 72.5
Gohir.A12G247000 Gossypium hirsutum HOM05D003640 ORTHO05D004439 6.9e-21 104.0 113 54.9
QL09p007408 Quercus lobata HOM05D003640 ORTHO05D004439 5.0e-19 97.8 97 62.9
QL93p0214_0013 Quercus lobata HOM05D003640 ORTHO05D004439 5.0e-19 97.8 97 62.9
Atru.chr12.2367 Acer truncatum HOM05D003640 ORTHO05D004439 8.5e-19 97.1 99 64.6
Cpa.g.sc3.144 Carica papaya HOM05D003640 ORTHO05D004439 1.2e-17 93.2 107 57.0
Haze_00277 Corylus avellana HOM05D003640 ORTHO05D004439 2.1e-17 92.4 112 52.7
Manes.01G041300 Manihot esculenta HOM05D003640 ORTHO05D004439 4.7e-17 91.3 97 60.8
Gohir.A09G186400 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.4e-16 89.7 101 58.4
Actinidia28276 Actinidia chinensis HOM05D003640 ORTHO05D004439 6.7e-16 87.4 113 56.6
Dinv29226 Davidia involucrata HOM05D003640 ORTHO05D004439 8.8e-16 87.0 112 51.8
Gohir.D09G181300 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.5e-15 86.3 104 54.8
Nn3g18833 Nelumbo nucifera HOM05D003640 ORTHO05D004439 2.6e-15 85.5 108 53.7
RcHm_v2.0_Chr1g0382611 Rosa chinensis HOM05D003640 ORTHO05D004439 2.6e-15 85.5 100 58.0
Dinv35374 Davidia involucrata HOM05D003640 ORTHO05D004439 5.7e-15 84.3 112 50.9
Potri.012G023200 Populus trichocarpa HOM05D003640 ORTHO05D004439 5.7e-15 84.3 96 57.3
Lj1C1026T8 Lonicera japonica HOM05D003640 ORTHO05D004439 7.4e-15 84.0 100 56.0
vmacro06427 Vaccinium macrocarpon HOM05D003640 ORTHO05D004439 7.4e-15 84.0 98 58.2
arahy.Tifrunner.gnm1.ann1.1EDB5Y Arachis hypogaea HOM05D003640 ORTHO05D004439 1.3e-14 83.2 113 51.3
Gorai.006G203300 Gossypium raimondii HOM05D003640 ORTHO05D004439 1.3e-14 83.2 104 54.8
Sabra12G0010700 Salix brachista HOM05D003640 ORTHO05D004439 1.3e-14 83.2 97 54.6
CiPaw.05G202900 Carya illinoinensis HOM05D003640 ORTHO05D004439 2.8e-14 82.0 111 49.5
CiPaw.06G042300 Carya illinoinensis HOM05D003640 ORTHO05D004439 2.8e-14 82.0 111 50.5
Prupe.2G317300 Prunus persica HOM05D003640 ORTHO05D004439 4.8e-14 81.3 100 55.0
TWI39G1295 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 8.2e-14 80.5 113 49.6
CSS0041088 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 1.4e-13 79.7 99 55.6
PGR142G2086 Punica granatum HOM05D003640 ORTHO05D004439 1.4e-13 79.7 104 53.8
arahy.Tifrunner.gnm1.ann1.BT3HV7 Arachis hypogaea HOM05D003640 ORTHO05D004439 7.0e-13 77.4 113 47.8
GSVIVG01038625001 Vitis vinifera HOM05D003640 ORTHO05D004439 7.0e-13 77.4 90 57.8
CSS0045837 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 9.1e-13 77.0 106 51.9
PSO135G0929 Papaver somniferum HOM05D003640 ORTHO05D004439 1.2e-12 76.6 101 51.5
Nn1g00405 Nelumbo nucifera HOM05D003640 ORTHO05D004439 1.6e-12 76.3 109 51.4
TAR375G0550 Trochodendron aralioides HOM05D003640 ORTHO05D004439 2.6e-12 75.5 107 52.3
TAR636G3562 Trochodendron aralioides HOM05D003640 ORTHO05D004439 3.5e-12 75.1 108 50.0
Rhsim03G0214000 Rhododendron simsii HOM05D003640 ORTHO05D004439 5.9e-12 74.3 98 54.1
Aqoxy7G00014 Aquilegia oxysepala HOM05D003640 ORTHO05D004439 1.3e-11 73.2 108 51.9
RcHm_v2.0_Chr1g0382521 Rosa chinensis HOM05D003640 ORTHO05D004439 1.3e-11 73.2 100 52.0
Actinidia34257 Actinidia chinensis HOM05D003640 ORTHO05D004439 1.1e-10 70.1 115 45.2
Cc02_g00960 Coffea canephora HOM05D003640 ORTHO05D004439 1.5e-10 69.7 96 44.8
Ah.07g204850 Amaranthus hybridus HOM05D003640 ORTHO05D004439 1.9e-10 69.3 100 47.0
ClCG01G000140 Citrullus lanatus HOM05D003640 ORTHO05D004439 4.2e-10 68.2 104 46.2
EL10Ac3g05201 Beta vulgaris HOM05D003640 ORTHO05D004439 7.2e-10 67.4 100 47.0
MD01G1227300 Malus domestica HOM05D003640 ORTHO05D004439 9.4e-10 67.0 98 46.9
Psat0s2807g0080 Pisum sativum HOM05D003640 ORTHO05D004439 9.4e-10 67.0 104 47.1
MBI12_g23004_MAGBIO Magnolia biondii HOM05D003640 ORTHO05D004439 1.2e-09 66.6 111 45.0
Hund21040 Selenicereus undatus HOM05D003640 ORTHO05D004439 2.7e-09 65.5 83 44.6
TAR629G0154 Trochodendron aralioides HOM05D003640 ORTHO05D004439 3.6e-09 65.1 106 47.2
MELO3C005925.2 Cucumis melo HOM05D003640 ORTHO05D004439 4.7e-09 64.7 104 45.2
Lalb_Chr08g0239801 Lupinus albus HOM05D003640 ORTHO05D004439 4.7e-09 64.7 91 49.5
Glyma.06G134300 Glycine max HOM05D003640 ORTHO05D004439 6.1e-09 64.3 103 44.7
Oeu037965.1 Olea europaea HOM05D003640 ORTHO05D004439 8.0e-09 63.9 111 46.8
Lj1g0027227 Lotus japonicus HOM05D003640 ORTHO05D004439 1.0e-08 63.5 109 42.2
PSO384G0385 Papaver somniferum HOM05D003640 ORTHO05D004439 1.0e-08 63.5 101 45.5
Sc19g0000670 Simmondsia chinensis HOM05D003640 ORTHO05D004439 1.4e-08 63.2 98 50.0
CsaV3_5G000020 Cucumis sativus L. HOM05D003640 ORTHO05D004439 1.8e-08 62.8 104 44.2
Ca_16756_v3 Cicer arietinum L. HOM05D003640 ORTHO05D004439 3.0e-08 62.0 97 47.4
Hma1.2p1_0094F.1_g047240 Hydrangea macrophylla HOM05D003640 ORTHO05D004439 3.0e-08 62.0 113 42.5
MD07G1297600 Malus domestica HOM05D003640 ORTHO05D004439 4.0e-08 61.6 96 47.9
Migut.F00997 Erythranthe guttata HOM05D003640 ORTHO05D004439 8.8e-08 60.5 89 43.8
Oeu061023.1 Olea europaea HOM05D003640 ORTHO05D004439 8.8e-08 60.5 96 51.0
Lalb_Chr23g0271841 Lupinus albus HOM05D003640 ORTHO05D004439 1.5e-07 59.7 92 46.7
AUR62006022 Chenopodium quinoa HOM05D003640 ORTHO05D004439 2.6e-07 58.9 97 45.4
Sed0021595 Sechium edule HOM05D003640 ORTHO05D004439 3.3e-07 58.5 95 45.3
Hund09700 Selenicereus undatus HOM05D003640 ORTHO05D004439 5.7e-07 57.8 73 47.9
SalBow2G2490 Salvia bowleyana HOM05D003640 ORTHO05D004439 1.7e-06 56.2 110 40.9
AUR62035604 Chenopodium quinoa HOM05D003640 ORTHO05D004439 2.2e-06 55.8 97 44.3
Sed0000635 Sechium edule HOM05D003640 ORTHO05D004439 2.8e-06 55.5 101 41.6
VMungo1309G3003 Vigna mungo HOM05D003640 ORTHO05D004439 3.7e-06 55.1 110 41.8
Lalb_Chr11g0067271 Lupinus albus HOM05D003640 ORTHO05D004439 4.8e-06 54.7 99 42.4
SGA_v2.0_scaffold565G52945 Striga asiatica HOM05D003640 ORTHO05D004439 4.8e-06 54.7 96 46.9
Actinidia08687 Actinidia chinensis HOM05D003640 ORTHO05D004439 8.2e-06 53.9 100 44.0
FvH4_7g32660 Fragaria vesca HOM05D003640 ORTHO05D004439 8.2e-06 53.9 97 43.3
FAN01G0295 Fragaria x ananassa HOM05D003640 ORTHO05D004439 8.2e-06 53.9 97 43.3
FAN03G1455 Fragaria x ananassa HOM05D003640 ORTHO05D004439 8.2e-06 53.9 97 43.3
FAN10G0822 Fragaria x ananassa HOM05D003640 ORTHO05D004439 8.2e-06 53.9 97 43.3
FAN10G2795 Fragaria x ananassa HOM05D003640 ORTHO05D004439 8.2e-06 53.9 97 43.3


User provided reference genes

Program Settings