Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_24901 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.2e-46 188.0 89 100.0
COL.COLO4_22673 Corchorus olitorius HOM05D000004 ORTHO05D000002 8.3e-18 93.6 61 70.5
COL.COLO4_06470 Corchorus olitorius HOM05D000004 ORTHO05D000002 7.0e-17 90.5 61 65.6
COL.COLO4_05398 Corchorus olitorius HOM05D000004 ORTHO05D000002 6.6e-15 84.0 67 59.7
COL.COLO4_20515 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.5e-14 82.8 66 57.6
COL.COLO4_29045 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.3e-14 81.6 61 65.6
COL.COLO4_30219 Corchorus olitorius HOM05D000004 ORTHO05D000002 9.5e-14 80.1 57 63.2
COL.COLO4_03641 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.2e-13 79.7 66 56.1
COL.COLO4_05134 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.2e-13 79.7 59 57.6
COL.COLO4_10977 Corchorus olitorius HOM05D000065 ORTHO05D008056 1.2e-13 79.7 66 56.1
COL.COLO4_19712 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.8e-13 78.6 58 63.8
COL.COLO4_23497 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.6e-13 78.2 59 57.6
COL.COLO4_12903 Corchorus olitorius HOM05D000004 ORTHO05D000002 6.1e-13 77.4 59 59.3
COL.COLO4_28149 Corchorus olitorius HOM05D000004 ORTHO05D000002 8.0e-13 77.0 51 68.6
COL.COLO4_28806 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.0e-12 76.6 64 56.2
COL.COLO4_08404 Corchorus olitorius HOM05D000004 ORTHO05D000002 4.0e-12 74.7 59 57.6
COL.COLO4_09190 Corchorus olitorius HOM05D000004 ORTHO05D000002 6.8e-12 73.9 57 59.6
COL.COLO4_21378 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.5e-11 72.8 59 50.8
COL.COLO4_20628 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.0e-11 72.4 60 56.7
COL.COLO4_10638 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.6e-11 72.0 60 56.7
COL.COLO4_24818 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.7e-11 70.9 59 54.2
COL.COLO4_29679 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.3e-10 69.7 66 50.0
COL.COLO4_36747 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.2e-10 68.9 70 48.6
COL.COLO4_16595 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.8e-10 68.6 53 62.3
TPR.G39702 Trifolium pratense HOM05D000004 ORTHO05D000002 4.9e-10 67.8 65 46.2
COL.COLO4_27446 Corchorus olitorius HOM05D000004 ORTHO05D000002 6.3e-10 67.4 54 55.6
Psat6g063720 Pisum sativum HOM05D012325 ORTHO05D013858 2.4e-09 65.5 65 46.2
COL.COLO4_36542 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.4e-09 64.3 64 51.6
ECA232G0168 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.0e-09 63.9 65 46.2
COL.COLO4_03749 Corchorus olitorius HOM05D000004 ORTHO05D000002 9.2e-09 63.5 53 56.6
PSO339G2783 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-08 62.8 65 43.1
TPR.G36416 Trifolium pratense HOM05D000211 ORTHO05D002517 5.9e-08 60.8 66 40.9
TWI81G0970 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.0e-07 60.1 68 38.2
ECA232G1984 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-07 59.7 51 52.9
ECA246G0443 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-07 59.7 51 52.9
Psat2g183480 Pisum sativum HOM05D000004 ORTHO05D000002 1.3e-07 59.7 89 33.7
Psat7g011880 Pisum sativum HOM05D000004 ORTHO05D000002 1.7e-07 59.3 65 41.5
Psat6g169480 Pisum sativum HOM05D028757 ORTHO05D000002 2.9e-07 58.5 66 39.4
Rhsim11G0145700 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.9e-07 58.5 59 42.4
SHI41518 Sapria himalayana HOM05D000004 ORTHO05D000002 3.9e-07 58.2 60 46.7
Psat1g135400 Pisum sativum HOM05D000004 ORTHO05D000002 5.0e-07 57.8 65 40.0
COL.COLO4_07188 Corchorus olitorius HOM05D000004 ORTHO05D000002 6.6e-07 57.4 47 51.1
Rhsim13G0234900 Rhododendron simsii HOM05D000004 ORTHO05D000002 6.6e-07 57.4 58 43.1
SHI44499 Sapria himalayana HOM05D000004 ORTHO05D000002 6.6e-07 57.4 65 46.2
TWI39G0003 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.6e-07 57.4 66 40.9
SHI48738 Sapria himalayana HOM05D000004 ORTHO05D000002 1.1e-06 56.6 60 46.7
Psat4g170120 Pisum sativum HOM05D000004 ORTHO05D000002 1.5e-06 56.2 64 42.2
SHI24713 Sapria himalayana HOM05D000004 ORTHO05D000002 1.5e-06 56.2 60 46.7
CAN.G2177.15 Capsicum annuum HOM05D000004 ORTHO05D000002 1.9e-06 55.8 67 41.8
ECA233G3293 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.3e-06 55.1 42 57.1
PSO675G1874 Papaver somniferum HOM05D000004 ORTHO05D000002 3.3e-06 55.1 66 37.9
Psat0s3343g0120 Pisum sativum HOM05D003122 ORTHO05D000002 3.3e-06 55.1 50 50.0
Psat6g049040 Pisum sativum HOM05D003122 ORTHO05D000002 3.3e-06 55.1 50 50.0
Psat6g198800 Pisum sativum HOM05D003122 ORTHO05D000002 3.3e-06 55.1 50 50.0
QL10p043279 Quercus lobata HOM05D000004 ORTHO05D000002 3.3e-06 55.1 67 37.3
SHI49581 Sapria himalayana HOM05D000004 ORTHO05D000002 3.3e-06 55.1 60 45.0
Psat5g251080 Pisum sativum HOM05D000004 ORTHO05D000002 4.3e-06 54.7 63 44.4
TWI77G0663 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 5.6e-06 54.3 64 39.1
COL.COLO4_36693 Corchorus olitorius HOM05D000004 ORTHO05D000002 7.3e-06 53.9 39 59.0
Psat3g197640 Pisum sativum HOM05D003122 ORTHO05D000002 7.3e-06 53.9 50 50.0
RhsimUnG0001700 Rhododendron simsii HOM05D000004 ORTHO05D000002 7.3e-06 53.9 53 43.4
Sopen04g007300 Solanum pennellii HOM05D000004 ORTHO05D000002 7.3e-06 53.9 52 44.2
ECA238G4401 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.5e-06 53.5 51 47.1
Psat3g017560 Pisum sativum HOM05D003122 ORTHO05D000002 9.5e-06 53.5 50 48.0
Psat5g159360 Pisum sativum HOM05D000004 ORTHO05D000002 9.5e-06 53.5 78 32.1
Sopen08g010010 Solanum pennellii HOM05D000004 ORTHO05D000002 9.5e-06 53.5 66 36.4


User provided reference genes

Program Settings