Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 6.1e-39 163.7 83 100.0
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 1.1e-35 152.9 83 92.8
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 1.8e-35 152.1 83 92.8
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 3.8e-33 144.4 80 88.8
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 6.5e-33 143.7 83 85.5
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 1.1e-32 142.9 81 87.7
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 1.4e-32 142.5 83 84.3
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 2.5e-32 141.7 80 86.2
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 2.5e-32 141.7 80 86.2
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 2.5e-32 141.7 80 86.2
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 2.5e-32 141.7 81 86.4
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 2.5e-32 141.7 81 86.4
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 2.5e-32 141.7 81 86.4
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 3.2e-32 141.4 80 86.2
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 3.2e-32 141.4 80 86.2
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 5.5e-32 140.6 80 85.0
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 9.4e-32 139.8 80 83.8
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 9.4e-32 139.8 83 81.9
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 9.4e-32 139.8 80 87.5
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 1.2e-31 139.4 83 84.3
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 2.7e-31 138.3 82 84.1
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 3.6e-31 137.9 80 82.5
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 4.7e-31 137.5 80 82.5
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 4.7e-31 137.5 80 82.5
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 4.7e-31 137.5 80 82.5
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 4.7e-31 137.5 80 82.5
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 4.7e-31 137.5 80 82.5
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 6.1e-31 137.1 83 80.7
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 6.1e-31 137.1 80 83.8
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 7.9e-31 136.7 80 83.8
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 7.9e-31 136.7 83 80.7
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 7.9e-31 136.7 80 85.0
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 7.9e-31 136.7 80 85.0
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 7.9e-31 136.7 80 85.0
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 7.9e-31 136.7 80 85.0
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 7.9e-31 136.7 80 85.0
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 7.9e-31 136.7 80 85.0
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 1.4e-30 136.0 80 81.2
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 3.0e-30 134.8 83 81.9
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 3.0e-30 134.8 80 85.0
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 6.7e-30 133.7 81 80.2
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 1.5e-29 132.5 79 81.0
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 1.5e-29 132.5 78 83.3
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 2.0e-29 132.1 81 79.0
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 2.0e-29 132.1 83 79.5
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 2.6e-29 131.7 76 88.2
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 3.3e-29 131.3 81 77.8
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 3.3e-29 131.3 80 81.2
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 3.3e-29 131.3 80 81.2
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 3.3e-29 131.3 83 77.1
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 4.4e-29 131.0 95 71.6
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 9.7e-29 129.8 76 82.9
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 1.3e-28 129.4 76 85.5
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 1.3e-28 129.4 80 81.2
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 8.2e-28 126.7 76 84.2
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 1.1e-27 126.3 77 80.5
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 1.4e-27 125.9 77 81.8
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 1.8e-27 125.6 83 72.3
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 2.4e-27 125.2 77 83.1
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 3.1e-27 124.8 81 76.5
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 3.1e-27 124.8 71 85.9
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 7.0e-27 123.6 76 82.9
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 7.0e-27 123.6 76 82.9
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 7.0e-27 123.6 80 75.0
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 7.0e-27 123.6 71 84.5
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 1.2e-26 122.9 69 88.4
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 2.0e-26 122.1 76 81.6
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 2.6e-26 121.7 76 80.3
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 2.6e-26 121.7 77 76.6
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 2.6e-26 121.7 76 81.6
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 5.9e-26 120.6 69 88.4
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 5.9e-26 120.6 76 80.3
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 1.3e-25 119.4 76 81.6
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 2.2e-25 118.6 77 79.2
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 2.2e-25 118.6 76 80.3
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 2.2e-25 118.6 76 76.3
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 2.2e-25 118.6 76 76.3
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 6.5e-25 117.1 76 77.6
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 8.5e-25 116.7 76 75.0
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 1.1e-24 116.3 72 77.8
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 1.9e-24 115.5 77 75.3
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 2.5e-24 115.2 76 78.9
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 3.2e-24 114.8 62 91.9
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 3.6e-23 111.3 76 77.6
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 4.7e-23 110.9 68 80.9
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 6.1e-23 110.5 99 63.6
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 6.1e-23 110.5 77 68.8
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 1.4e-22 109.4 68 80.9
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 1.4e-22 109.4 68 79.4
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 3.0e-22 108.2 81 66.7
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 3.0e-22 108.2 77 67.5
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 3.0e-22 108.2 65 81.5
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 4.0e-22 107.8 67 80.6
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 4.0e-22 107.8 83 65.1
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 8.8e-22 106.7 76 75.0
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 8.8e-22 106.7 152 42.8
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 2.6e-21 105.1 77 66.2
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 5.7e-21 104.0 77 64.9
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 9.7e-21 103.2 58 87.9
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 1.7e-20 102.4 76 69.7
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 2.8e-20 101.7 55 90.9
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 4.8e-20 100.9 95 62.1
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 8.2e-20 100.1 67 76.1
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 1.6e-18 95.9 68 66.2
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 5.9e-18 94.0 78 65.4
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 2.2e-17 92.0 61 75.4
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 8.5e-17 90.1 69 65.2
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 2.5e-16 88.6 122 43.4
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 7.2e-16 87.0 52 84.6
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 9.4e-16 86.7 55 83.6
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 1.2e-15 86.3 60 73.3
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 1.2e-15 86.3 52 84.6
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 3.6e-15 84.7 65 66.2
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 1.8e-14 82.4 68 63.2
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 8.8e-14 80.1 71 56.3
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 2.6e-13 78.6 77 51.9
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 3.4e-13 78.2 63 66.7
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.3e-12 76.3 53 75.5
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 1.3e-12 76.3 62 64.5
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 2.8e-12 75.1 62 66.1
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 1.5e-08 62.8 39 84.6
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 4.2e-08 61.2 35 88.6


User provided reference genes

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