Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_24558 Corchorus olitorius HOM05D015467 ORTHO05D001819 8.3e-97 357.1 185 100.0
COL.COLO4_24557 Corchorus olitorius HOM05D015467 ORTHO05D001819 2.7e-71 272.3 182 77.5
COL.COLO4_11312 Corchorus olitorius HOM05D015467 ORTHO05D001819 4.3e-69 265.0 185 73.0
COL.COLO4_04546 Corchorus olitorius HOM05D015467 ORTHO05D001819 6.2e-68 261.2 186 72.6
Thecc.10G106100 Theobroma cacao HOM05D015467 ORTHO05D001819 3.0e-62 242.3 177 71.2
COL.COLO4_04545 Corchorus olitorius HOM05D015467 ORTHO05D001819 7.6e-58 227.6 184 67.4
COL.COLO4_03638 Corchorus olitorius HOM05D015467 ORTHO05D001819 1.6e-47 193.4 186 61.3
COL.COLO4_34737 Corchorus olitorius HOM05D015467 ORTHO05D001819 1.5e-42 176.8 185 57.8
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 4.1e-19 99.0 170 40.0
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 1.0e-17 94.4 178 38.8
QL06p013377 Quercus lobata HOM05D003146 ORTHO05D001819 5.5e-16 88.6 174 33.9
Sed0025500 Sechium edule HOM05D003146 ORTHO05D001819 8.0e-15 84.7 176 34.1
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 8.8e-14 81.3 182 33.5
PGR004G1752 Punica granatum HOM05D003146 ORTHO05D001819 8.8e-14 81.3 173 30.1
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 3.4e-13 79.3 162 33.3
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 4.4e-13 79.0 167 34.7
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 1.7e-12 77.0 151 31.1
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 2.2e-12 76.6 177 31.6
MELO3C019860.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.3e-12 74.7 183 33.3
Ciclev10033748m.g Citrus clementina HOM05D003146 ORTHO05D001819 1.4e-11 73.9 156 35.3
Thhalv10012260m.g Eutrema salsugineum HOM05D008385 ORTHO05D001819 1.8e-11 73.6 175 32.0
MELO3C019867.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.0e-11 71.6 183 32.8
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 2.0e-10 70.1 161 29.8
MELO3C030067.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.7e-10 69.7 182 30.8
CsaV3_UNG225750 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.5e-10 68.9 182 30.2
CsaV3_UNG084670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 5.9e-10 68.6 151 31.1
CsaV3_UNG132030 Cucumis sativus L. HOM05D003146 ORTHO05D001819 5.9e-10 68.6 151 31.1
THA.LOC104802649 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 5.9e-10 68.6 181 29.8
A03p29810 Brassica napus HOM05D008385 ORTHO05D001819 7.7e-10 68.2 170 28.8
CsaV3_6G022330 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.7e-10 68.2 180 31.7
Thhalv10022367m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 7.7e-10 68.2 183 28.4
THA.LOC104820282 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 7.7e-10 68.2 184 30.4
ClCG09G008860 Citrullus lanatus HOM05D003146 ORTHO05D001819 1.0e-09 67.8 152 30.3
MELO3C019686.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.3e-09 67.4 181 31.5
QL08p052685 Quercus lobata HOM05D003146 ORTHO05D001819 1.7e-09 67.0 175 32.0
QL08p052692 Quercus lobata HOM05D003146 ORTHO05D001819 1.7e-09 67.0 175 32.0
Sed0022729 Sechium edule HOM05D003146 ORTHO05D001819 1.7e-09 67.0 163 30.1
Solyc03g112180.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 1.7e-09 67.0 153 28.8
Aqoxy2G02209 Aquilegia oxysepala HOM05D030271 ORTHO05D026710 2.3e-09 66.6 176 27.3
MELO3C034932.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.9e-09 66.2 183 30.6
Sopen09g028760 Solanum pennellii HOM05D003146 ORTHO05D001819 2.9e-09 66.2 153 29.4
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 2.9e-09 66.2 183 30.6
CAN.G338.41 Capsicum annuum HOM05D003146 ORTHO05D001819 3.8e-09 65.9 182 28.6
MELO3C019866.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.8e-09 65.9 183 30.6
MELO3C025842.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.8e-09 65.9 176 30.7
PGSC0003DMG400003833 Solanum tuberosum HOM05D003146 ORTHO05D001819 3.8e-09 65.9 153 28.8
MELO3C030065.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.0e-09 65.5 183 30.1
MELO3C032417.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.0e-09 65.5 182 30.2
Actinidia18154 Actinidia chinensis HOM05D009438 ORTHO05D010870 6.5e-09 65.1 164 26.8
C03p36070 Brassica napus HOM05D008385 ORTHO05D010806 6.5e-09 65.1 170 27.6
MELO3C001332.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.5e-09 65.1 182 30.2
Solyc09g072950.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 8.6e-09 64.7 149 29.5
MELO3C028122.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.1e-08 64.3 175 29.7
CsaV3_4G038000 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.1e-08 64.3 153 30.1
CsaV3_6G023780 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.1e-08 64.3 153 30.1
CsaV3_6G026320 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.1e-08 64.3 153 30.1
CsaV3_6G026340 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.1e-08 64.3 153 30.1
CsaV3_6G027350 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.1e-08 64.3 153 30.1
CsaV3_UNG007100 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.1e-08 64.3 153 30.1
CsaV3_UNG217460 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.1e-08 64.3 153 30.1
CsaV3_UNG235420 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.1e-08 64.3 153 30.1
Thhalv10011818m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 1.1e-08 64.3 171 28.7
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.1e-08 64.3 151 32.5
MD16G1147400 Malus domestica HOM05D003146 ORTHO05D001819 1.5e-08 63.9 138 33.3
Actinidia14750 Actinidia chinensis HOM05D009438 ORTHO05D010870 1.9e-08 63.5 167 25.1
MELO3C027265.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.9e-08 63.5 183 30.1
MELO3C028017.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.9e-08 63.5 182 29.7
CANSAT54G1773 Cannabis sativa HOM05D003556 ORTHO05D003404 2.5e-08 63.2 154 29.9
CsaV3_2G000020 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.5e-08 63.2 122 31.1
AT1G48020 Arabidopsis thaliana HOM05D003146 ORTHO05D001819 3.2e-08 62.8 171 29.2
MELO3C000387.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.2e-08 62.8 183 30.1
MELO3C027585.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.2e-08 62.8 184 30.4
MBI18_g04557_MAGBIO Magnolia biondii HOM05D008403 ORTHO05D010317 3.2e-08 62.8 178 29.8
THA.LOC104803096 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 3.2e-08 62.8 179 26.8
Aa31LG10G5710 Aethionema arabicum HOM05D008385 ORTHO05D010806 5.5e-08 62.0 154 31.2
MELO3C027590.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.5e-08 62.0 151 29.1
MELO3C034829.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.5e-08 62.0 175 28.6
Migut.M01954 Erythranthe guttata HOM05D009438 ORTHO05D010870 5.5e-08 62.0 152 28.3
THA.LOC104825373 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 5.5e-08 62.0 150 32.0
Aa31LG10G5700 Aethionema arabicum HOM05D008385 ORTHO05D001819 9.5e-08 61.2 181 30.9
THA.LOC104802648 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 9.5e-08 61.2 166 29.5
MELO3C030075.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.2e-07 60.8 146 32.2
CsaV3_6G020170 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.2e-07 60.8 135 32.6
Aa31LG10G5720 Aethionema arabicum HOM05D008385 ORTHO05D001819 1.6e-07 60.5 179 30.2
Nitab4.5_0010452g0030 Nicotiana tabacum HOM05D003146 ORTHO05D001819 1.6e-07 60.5 149 29.5
AL1G54540 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 2.1e-07 60.1 171 28.7
Lalb_Chr14g0366281 Lupinus albus HOM05D007995 ORTHO05D001819 2.1e-07 60.1 190 28.9
Sp1g35000 Schrenkiella parvula HOM05D003146 ORTHO05D001819 2.1e-07 60.1 171 27.5
CARHR037660 Cardamine hirsuta HOM05D003146 ORTHO05D001819 2.8e-07 59.7 171 27.5
ClCG06G004590 Citrullus lanatus HOM05D003146 ORTHO05D001819 2.8e-07 59.7 140 30.7
C08p05630 Brassica napus HOM05D003146 ORTHO05D001819 3.6e-07 59.3 171 26.9
BolC8t47376H Brassica oleracea HOM05D003146 ORTHO05D001819 4.7e-07 58.9 171 26.9
Oeu000482.1 Olea europaea HOM05D009438 ORTHO05D010870 4.7e-07 58.9 185 24.9
A08p05340 Brassica napus HOM05D003146 ORTHO05D001819 1.0e-06 57.8 171 26.3
BraSC267t45946Z Brassica rapa HOM05D003146 ORTHO05D001819 1.0e-06 57.8 171 26.3
CsaV3_6G021230 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.4e-06 57.4 155 29.0
PSO675G4416 Papaver somniferum HOM05D008403 ORTHO05D010317 1.4e-06 57.4 183 31.1
Rhsim04G0244000 Rhododendron simsii HOM05D003146 ORTHO05D001819 1.4e-06 57.4 118 35.6
A05p21240 Brassica napus HOM05D003146 ORTHO05D001819 1.8e-06 57.0 171 27.5
MELO3C027589.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.8e-06 57.0 151 31.1
MELO3C027828.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.8e-06 57.0 149 28.2
Thhalv10012028m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 1.8e-06 57.0 167 25.7
Actinidia18487 Actinidia chinensis HOM05D003146 ORTHO05D001819 2.3e-06 56.6 110 32.7
AL1G54590 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 2.3e-06 56.6 140 29.3
BcaB02g11337 Brassica carinata HOM05D003146 ORTHO05D001819 2.3e-06 56.6 171 28.7
BraA05t21032Z Brassica rapa HOM05D003146 ORTHO05D001819 2.3e-06 56.6 171 27.5
MELO3C001272.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.3e-06 56.6 149 28.9
Oeu063135.1 Olea europaea HOM05D009438 ORTHO05D010870 2.3e-06 56.6 176 25.0
Sp3g15430 Schrenkiella parvula HOM05D003146 ORTHO05D001819 2.3e-06 56.6 183 26.2
BcaC05g27598 Brassica carinata HOM05D003146 ORTHO05D001819 3.0e-06 56.2 171 27.5
C05p35840 Brassica napus HOM05D003146 ORTHO05D001819 3.0e-06 56.2 171 27.5
BolC5t32301H Brassica oleracea HOM05D003146 ORTHO05D001819 3.0e-06 56.2 171 27.5
BcaB04g17471 Brassica carinata HOM05D003146 ORTHO05D001819 5.2e-06 55.5 171 25.7
BcaC07g37182 Brassica carinata HOM05D003146 ORTHO05D001819 5.2e-06 55.5 171 26.3
Carub.0001s3713 Capsella rubella HOM05D003146 ORTHO05D001819 5.2e-06 55.5 171 26.9
ClCG11G011230 Citrullus lanatus HOM05D003146 ORTHO05D001819 5.2e-06 55.5 151 27.2
Sed0025474 Sechium edule HOM05D003146 ORTHO05D001819 5.2e-06 55.5 151 28.5
PGSC0003DMG400040362 Solanum tuberosum HOM05D003146 ORTHO05D001819 5.2e-06 55.5 153 27.5
Migut.M01955 Erythranthe guttata HOM05D011567 ORTHO05D010870 6.8e-06 55.1 188 23.9
TWI09G0175 Tripterygium wilfordii HOM05D003146 ORTHO05D001819 6.8e-06 55.1 138 31.9
Aqoxy2G02574 Aquilegia oxysepala HOM05D030271 ORTHO05D026710 8.8e-06 54.7 169 25.4


User provided reference genes

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