Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_24557 Corchorus olitorius HOM05D015467 ORTHO05D001819 8.2e-100 367.1 188 100.0
COL.COLO4_24558 Corchorus olitorius HOM05D015467 ORTHO05D001819 2.7e-71 272.3 182 77.5
COL.COLO4_11312 Corchorus olitorius HOM05D015467 ORTHO05D001819 1.3e-60 236.9 181 65.7
COL.COLO4_04546 Corchorus olitorius HOM05D015467 ORTHO05D001819 1.4e-59 233.4 182 65.9
Thecc.10G106100 Theobroma cacao HOM05D015467 ORTHO05D001819 1.5e-56 223.4 183 63.9
COL.COLO4_04545 Corchorus olitorius HOM05D015467 ORTHO05D001819 1.3e-52 210.3 182 62.6
COL.COLO4_03638 Corchorus olitorius HOM05D015467 ORTHO05D001819 1.6e-39 166.8 181 53.6
COL.COLO4_34737 Corchorus olitorius HOM05D015467 ORTHO05D001819 2.6e-37 159.5 183 51.9
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 7.3e-16 88.2 150 39.3
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 1.6e-15 87.0 166 36.7
QL06p013377 Quercus lobata HOM05D003146 ORTHO05D001819 8.1e-15 84.7 172 32.6
Sed0025500 Sechium edule HOM05D003146 ORTHO05D001819 1.4e-14 84.0 178 33.7
QL08p052685 Quercus lobata HOM05D003146 ORTHO05D001819 1.2e-13 80.9 184 37.5
QL08p052692 Quercus lobata HOM05D003146 ORTHO05D001819 1.2e-13 80.9 184 37.5
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 2.6e-13 79.7 175 33.1
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 4.5e-13 79.0 185 33.5
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 9.9e-13 77.8 151 30.5
PGR004G1752 Punica granatum HOM05D003146 ORTHO05D001819 9.9e-13 77.8 183 30.1
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 1.9e-11 73.6 160 31.9
CsaV3_6G022330 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.1e-11 71.6 176 31.8
Ciclev10033748m.g Citrus clementina HOM05D003146 ORTHO05D001819 1.6e-10 70.5 174 33.3
Thhalv10012260m.g Eutrema salsugineum HOM05D008385 ORTHO05D001819 1.6e-10 70.5 176 29.5
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 2.7e-10 69.7 150 34.0
Thhalv10022367m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 1.3e-09 67.4 178 29.8
CsaV3_UNG225750 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.3e-09 66.6 178 29.2
CAN.G338.41 Capsicum annuum HOM05D003146 ORTHO05D001819 3.0e-09 66.2 179 27.9
MELO3C025842.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.0e-09 66.2 178 30.3
MELO3C034932.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.1e-09 65.5 178 29.8
MELO3C019867.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.7e-09 65.1 178 29.8
CsaV3_UNG084670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 6.7e-09 65.1 151 29.8
CsaV3_UNG132030 Cucumis sativus L. HOM05D003146 ORTHO05D001819 6.7e-09 65.1 151 29.8
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 8.7e-09 64.7 142 31.7
THA.LOC104803096 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 8.7e-09 64.7 149 28.9
Sopen09g028760 Solanum pennellii HOM05D003146 ORTHO05D001819 1.1e-08 64.3 155 27.1
MELO3C027265.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.5e-08 63.9 178 29.2
THA.LOC104802649 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.5e-08 63.9 136 30.9
Aa31LG10G5700 Aethionema arabicum HOM05D008385 ORTHO05D001819 1.9e-08 63.5 170 30.0
MELO3C019866.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.9e-08 63.5 178 29.2
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.9e-08 63.5 175 30.9
MELO3C030067.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.5e-08 63.2 178 29.2
MELO3C032417.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.5e-08 63.2 178 29.2
Solyc09g072950.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 3.3e-08 62.8 151 27.8
CANSAT54G1773 Cannabis sativa HOM05D003556 ORTHO05D003404 4.3e-08 62.4 154 28.6
Actinidia14750 Actinidia chinensis HOM05D009438 ORTHO05D010870 5.6e-08 62.0 172 25.0
MELO3C028017.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.6e-08 62.0 180 27.8
MELO3C027585.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.4e-08 61.6 178 28.7
Lalb_Chr14g0366281 Lupinus albus HOM05D007995 ORTHO05D001819 7.4e-08 61.6 187 28.9
Thhalv10011818m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 9.6e-08 61.2 174 28.7
Sed0022729 Sechium edule HOM05D003146 ORTHO05D001819 9.6e-08 61.2 148 29.7
MELO3C000387.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.3e-07 60.8 178 28.7
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.3e-07 60.8 175 30.9
AL1G54540 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 1.6e-07 60.5 174 28.7
CsaV3_6G023780 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.6e-07 60.5 173 28.9
CsaV3_4G038000 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.1e-07 60.1 171 28.1
CsaV3_6G026320 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.1e-07 60.1 171 28.1
CsaV3_6G026340 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.1e-07 60.1 171 28.1
CsaV3_6G027350 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.1e-07 60.1 171 28.1
CsaV3_UNG007100 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.1e-07 60.1 171 28.1
CsaV3_UNG217460 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.1e-07 60.1 171 28.1
CsaV3_UNG235420 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.1e-07 60.1 171 28.1
Dinv22854 Davidia involucrata HOM05D009438 ORTHO05D010870 2.1e-07 60.1 159 27.7
Migut.M01954 Erythranthe guttata HOM05D009438 ORTHO05D010870 2.1e-07 60.1 152 28.3
PGSC0003DMG400003833 Solanum tuberosum HOM05D003146 ORTHO05D001819 2.8e-07 59.7 119 27.7
A03p29810 Brassica napus HOM05D008385 ORTHO05D001819 3.7e-07 59.3 152 27.6
ClCG09G008860 Citrullus lanatus HOM05D003146 ORTHO05D001819 3.7e-07 59.3 169 25.4
THA.LOC104802648 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 3.7e-07 59.3 148 28.4
CARHR037660 Cardamine hirsuta HOM05D003146 ORTHO05D001819 4.8e-07 58.9 174 27.6
MELO3C027590.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.8e-07 58.9 149 28.9
CsaV3_2G000020 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.8e-07 58.9 171 28.1
Sp1g35000 Schrenkiella parvula HOM05D003146 ORTHO05D001819 4.8e-07 58.9 174 28.2
Solyc03g112180.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 4.8e-07 58.9 132 27.3
Nn3g20356 Nelumbo nucifera HOM05D003146 ORTHO05D001819 6.2e-07 58.5 174 26.4
THA.LOC104820282 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 6.2e-07 58.5 176 29.0
MBI18_g04557_MAGBIO Magnolia biondii HOM05D008403 ORTHO05D010317 1.1e-06 57.8 176 28.4
QL04p005674 Quercus lobata HOM05D003146 ORTHO05D001819 1.1e-06 57.8 172 29.1
PGSC0003DMG400040362 Solanum tuberosum HOM05D003146 ORTHO05D001819 1.1e-06 57.8 171 25.7
THA.LOC104825373 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.1e-06 57.8 175 30.3
MD16G1147400 Malus domestica HOM05D003146 ORTHO05D001819 1.4e-06 57.4 138 29.7
TAR626G0884 Trochodendron aralioides HOM05D004113 ORTHO05D001207 1.4e-06 57.4 174 29.9
MELO3C030075.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.8e-06 57.0 145 29.7
Oeu000482.1 Olea europaea HOM05D009438 ORTHO05D010870 1.8e-06 57.0 150 26.0
C03p36070 Brassica napus HOM05D008385 ORTHO05D010806 2.4e-06 56.6 171 25.7
AT1G48020 Arabidopsis thaliana HOM05D003146 ORTHO05D001819 3.1e-06 56.2 174 28.2
A05p21240 Brassica napus HOM05D003146 ORTHO05D001819 3.1e-06 56.2 174 28.2
CsaV3_6G020170 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.1e-06 56.2 131 30.5
TWI56G0141 Tripterygium wilfordii HOM05D001445 ORTHO05D003404 3.1e-06 56.2 176 26.1
BcaB02g11337 Brassica carinata HOM05D003146 ORTHO05D001819 4.0e-06 55.8 174 28.7
BcaC05g27598 Brassica carinata HOM05D003146 ORTHO05D001819 4.0e-06 55.8 174 28.2
C05p35840 Brassica napus HOM05D003146 ORTHO05D001819 4.0e-06 55.8 174 28.2
BolC5t32301H Brassica oleracea HOM05D003146 ORTHO05D001819 4.0e-06 55.8 174 28.2
BraA05t21032Z Brassica rapa HOM05D003146 ORTHO05D001819 4.0e-06 55.8 174 28.2
CsaV3_6G021230 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.0e-06 55.8 147 29.3
Nitab4.5_0005440g0020 Nicotiana tabacum HOM05D003146 ORTHO05D001819 4.0e-06 55.8 176 25.6
Dinv22853 Davidia involucrata HOM05D009438 ORTHO05D010870 5.3e-06 55.5 118 31.4
Sp3g15430 Schrenkiella parvula HOM05D003146 ORTHO05D001819 5.3e-06 55.5 149 26.8
MELO3C019686.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.9e-06 55.1 178 27.5


User provided reference genes

Program Settings