Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_24339 Corchorus olitorius HOM05D007161 ORTHO05D009103 3.6e-56 221.9 161 100.0
Thecc.03G103000 Theobroma cacao HOM05D007161 ORTHO05D009103 1.5e-49 199.9 161 91.9
Gohir.A07G068000 Gossypium hirsutum HOM05D007161 ORTHO05D009103 1.9e-49 199.5 161 91.3
Gohir.D07G072600 Gossypium hirsutum HOM05D007161 ORTHO05D009103 4.3e-49 198.4 161 91.3
Gorai.001G076800 Gossypium raimondii HOM05D007161 ORTHO05D009103 2.8e-48 195.7 161 90.7
Duzib084G1357 Durio zibethinus HOM05D007161 ORTHO05D009103 7.1e-44 181.0 150 92.0
Ciclev10022373m.g Citrus clementina HOM05D007161 ORTHO05D009103 1.0e-37 160.6 162 80.9
CsaV3_1G006050 Cucumis sativus L. HOM05D007161 ORTHO05D009103 2.9e-37 159.1 163 80.4
MELO3C002036.2 Cucumis melo HOM05D007161 ORTHO05D009103 3.2e-36 155.6 163 79.8
arahy.Tifrunner.gnm1.ann1.KM320G Arachis hypogaea HOM05D007161 ORTHO05D009103 4.2e-36 155.2 161 80.1
ClCG04G011740 Citrullus lanatus HOM05D007161 ORTHO05D009103 5.5e-36 154.8 163 80.4
Manes.06G083700 Manihot esculenta HOM05D007161 ORTHO05D009103 5.5e-36 154.8 162 80.9
arahy.Tifrunner.gnm1.ann1.N0KAAL Arachis hypogaea HOM05D007161 ORTHO05D009103 1.6e-35 153.3 161 80.1
GSVIVG01008106001 Vitis vinifera HOM05D007161 ORTHO05D009103 2.1e-35 152.9 160 80.6
Dinv22772 Davidia involucrata HOM05D007161 ORTHO05D009103 7.9e-35 151.0 160 78.8
Potri.015G058600 Populus trichocarpa HOM05D007161 ORTHO05D009103 7.9e-35 151.0 162 79.6
Glyma.04G161600 Glycine max HOM05D007161 ORTHO05D009103 1.8e-34 149.8 158 79.7
Phvul.009G202100 Phaseolus vulgaris HOM05D007161 ORTHO05D009103 2.3e-34 149.4 158 79.7
PGR083G0667 Punica granatum HOM05D007161 ORTHO05D009103 3.0e-34 149.1 159 79.2
QL10p019814 Quercus lobata HOM05D007161 ORTHO05D009103 3.9e-34 148.7 161 78.3
Sed0004238 Sechium edule HOM05D007161 ORTHO05D009103 8.7e-34 147.5 163 77.3
Haze_07737 Corylus avellana HOM05D007161 ORTHO05D009103 1.6e-32 143.3 159 77.4
THA.LOC104801155 Tarenaya hassleriana HOM05D007161 ORTHO05D009103 2.2e-32 142.9 164 75.6
Atru.chr9.557 Acer truncatum HOM05D007161 ORTHO05D009103 2.8e-32 142.5 162 79.0
Glyma.06G204200 Glycine max HOM05D007161 ORTHO05D009103 3.7e-32 142.1 158 77.8
Eucgr.B00604 Eucalyptus grandis HOM05D007161 ORTHO05D009103 4.8e-32 141.7 163 75.5
Cfa019345 Carpinus fangiana HOM05D007161 ORTHO05D009103 8.2e-32 141.0 159 76.7
MSTRG.4482 Avicennia marina HOM05D007161 ORTHO05D009103 1.1e-31 140.6 162 73.5
Nn4g23440 Nelumbo nucifera HOM05D007161 ORTHO05D009103 9.0e-31 137.5 162 76.5
CiPaw.11G054500 Carya illinoinensis HOM05D007161 ORTHO05D009103 5.9e-30 134.8 160 75.0
Nitab4.5_0001485g0090 Nicotiana tabacum HOM05D007161 ORTHO05D009103 1.0e-29 134.0 159 74.2
TAR629G0203 Trochodendron aralioides HOM05D007161 ORTHO05D009103 1.0e-29 134.0 162 72.8
Ca_14363_v3 Cicer arietinum L. HOM05D007161 ORTHO05D009103 2.9e-29 132.5 158 74.7
Sc11g0004490 Simmondsia chinensis HOM05D007161 ORTHO05D009103 1.1e-28 130.6 162 72.8
CAN.G1228.16 Capsicum annuum HOM05D007161 ORTHO05D009103 2.5e-28 129.4 160 71.2
CANSAT56G0131 Cannabis sativa HOM05D007161 ORTHO05D009103 7.2e-28 127.9 162 73.5
Cc00_g12110 Coffea canephora HOM05D007161 ORTHO05D009103 9.3e-28 127.5 162 70.4
Hund02576 Selenicereus undatus HOM05D007161 ORTHO05D009103 9.3e-28 127.5 162 71.0
TWI60G0438 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 1.2e-27 127.1 161 75.8
Rhsim08G0144900 Rhododendron simsii HOM05D007161 ORTHO05D009103 2.1e-27 126.3 162 73.5
CDE05G0262 Ceratophyllum demersum HOM05D007161 ORTHO05D009103 4.6e-27 125.2 161 72.0
MSTRG.9598 Avicennia marina HOM05D007161 ORTHO05D009103 6.1e-27 124.8 162 71.6
vmacro17616 Vaccinium macrocarpon HOM05D007161 ORTHO05D009103 6.1e-27 124.8 180 67.8
Sopen03g034090 Solanum pennellii HOM05D007161 ORTHO05D009103 1.0e-26 124.0 162 71.6
PGSC0003DMG400024633 Solanum tuberosum HOM05D007161 ORTHO05D009103 1.0e-26 124.0 162 72.8
TPR.G12153 Trifolium pratense HOM05D007161 ORTHO05D009103 1.3e-26 123.6 158 72.2
TWI81G0640 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 3.9e-26 122.1 161 73.9
ATR0177G008 Amborella trichopoda HOM05D007161 ORTHO05D009103 5.1e-26 121.7 163 68.1
Oeu017188.1 Olea europaea HOM05D007161 ORTHO05D009103 5.1e-26 121.7 142 73.2
Sabra15G0084100 Salix brachista HOM05D007161 ORTHO05D009103 2.5e-25 119.4 159 71.7
Psat5g207080 Pisum sativum HOM05D007161 ORTHO05D009103 3.3e-25 119.0 158 71.5
CSS0029825 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 4.3e-25 118.6 143 76.2
CSS0009196 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 5.7e-25 118.2 140 77.9
MD06G1225900 Malus domestica HOM05D007161 ORTHO05D009103 1.7e-24 116.7 161 70.2
EL10Ac5g11145 Beta vulgaris HOM05D007161 ORTHO05D009103 2.2e-24 116.3 151 72.2
Zm00001eb029520 Zea mays HOM05D007161 ORTHO05D009103 2.2e-24 116.3 162 66.7
Os12g0575000 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 3.7e-24 115.5 163 68.1
Solyc03g115020.3 Solanum lycopersicum HOM05D007161 ORTHO05D009103 6.3e-24 114.8 159 69.8
Medtr3g026020 Medicago truncatula HOM05D007161 ORTHO05D009103 3.1e-23 112.5 158 69.6
Lj1g0027416 Lotus japonicus HOM05D007161 ORTHO05D009103 6.9e-23 111.3 161 69.6
DCAR_011565 Daucus carota HOM05D007161 ORTHO05D009103 9.1e-23 110.9 161 66.5
Prupe.5G206100 Prunus persica HOM05D007161 ORTHO05D009103 1.2e-22 110.5 161 68.9
Peaxi162Scf00201g00331 Petunia axillaris HOM05D007161 ORTHO05D009103 4.5e-22 108.6 158 67.1
MD14G1212800 Malus domestica HOM05D007161 ORTHO05D009103 1.0e-21 107.5 159 67.3
Lsat_1_v5_gn_5_22381 Lactuca sativa HOM05D007161 ORTHO05D009103 1.7e-21 106.7 160 70.0
BolC3t12938H Brassica oleracea HOM05D007161 ORTHO05D009103 8.5e-21 104.4 161 65.8
SGA_v2.0_scaffold42G16039 Striga asiatica HOM05D007161 ORTHO05D009103 8.5e-21 104.4 161 66.5
BcaB01g05640 Brassica carinata HOM05D007161 ORTHO05D009103 1.1e-20 104.0 161 65.8
Ah.02g114100 Amaranthus hybridus HOM05D007161 ORTHO05D009103 1.4e-20 103.6 160 67.5
Lalb_Chr12g0199331 Lupinus albus HOM05D007161 ORTHO05D009103 1.4e-20 103.6 161 67.7
A03p03560 Brassica napus HOM05D007161 ORTHO05D009103 1.9e-20 103.2 161 65.8
BraA03t09706Z Brassica rapa HOM05D007161 ORTHO05D009103 1.9e-20 103.2 161 65.8
C03p04010 Brassica napus HOM05D007161 ORTHO05D009103 2.5e-20 102.8 161 65.8
RcHm_v2.0_Chr7g0183201 Rosa chinensis HOM05D007161 ORTHO05D009103 3.2e-20 102.4 161 66.5
Oeu044879.1 Olea europaea HOM05D007161 ORTHO05D009103 4.2e-20 102.1 142 71.1
Carub.0006s0694 Capsella rubella HOM05D007161 ORTHO05D009103 1.2e-19 100.5 161 63.4
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 1.6e-19 100.1 155 64.5
Os11g0460900 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 2.7e-19 99.4 145 44.8
BcaB01g05681 Brassica carinata HOM05D007161 ORTHO05D009103 3.6e-19 99.0 162 66.0
ECA246G0920 Erigeron canadensis HOM05D007161 ORTHO05D009103 3.6e-19 99.0 161 66.5
PSO017G0728 Papaver somniferum HOM05D007161 ORTHO05D009103 6.1e-19 98.2 165 63.6
FAN08G2338 Fragaria x ananassa HOM05D007161 ORTHO05D009103 1.8e-18 96.7 124 79.0
Sp6g34900 Schrenkiella parvula HOM05D007161 ORTHO05D009103 2.3e-18 96.3 161 62.7
FvH4_5g13740 Fragaria vesca HOM05D007161 ORTHO05D009103 5.1e-18 95.1 123 78.9
FAN18G1870 Fragaria x ananassa HOM05D007161 ORTHO05D009103 5.1e-18 95.1 123 78.9
HanXRQChr08g0230491 Helianthus annuus HOM05D007161 ORTHO05D009103 5.1e-18 95.1 120 80.8
Nitab4.5_0007356g0010 Nicotiana tabacum HOM05D007161 ORTHO05D009103 5.1e-18 95.1 117 79.5
PSO478G3435 Papaver somniferum HOM05D007161 ORTHO05D009103 2.0e-17 93.2 161 64.6
SEGI_08112 Sequoiadendron giganteum HOM05D007161 ORTHO05D009103 2.0e-17 93.2 161 58.4
FAN13G1189 Fragaria x ananassa HOM05D007161 ORTHO05D009103 2.6e-17 92.8 123 78.0
Actinidia04818 Actinidia chinensis HOM05D007161 ORTHO05D009103 9.7e-17 90.9 120 75.0
AL6G18400 Arabidopsis lyrata HOM05D007161 ORTHO05D009103 9.7e-17 90.9 92 75.0
Aa31LG3G18490 Aethionema arabicum HOM05D007161 ORTHO05D009103 1.3e-16 90.5 161 61.5
Lj5C102G4 Lonicera japonica HOM05D007161 ORTHO05D009103 1.3e-16 90.5 67 71.6
Aqoxy3G03679 Aquilegia oxysepala HOM05D007161 ORTHO05D009103 3.7e-16 89.0 65 72.3
Thhalv10014904m.g Eutrema salsugineum HOM05D007161 ORTHO05D009103 4.8e-16 88.6 92 76.1
CARHR205130 Cardamine hirsuta HOM05D007161 ORTHO05D009103 6.3e-16 88.2 161 59.0
AUR62021546 Chenopodium quinoa HOM05D007161 ORTHO05D009103 8.2e-16 87.8 117 76.1
HanXRQChr17g0550221 Helianthus annuus HOM05D007161 ORTHO05D009103 8.2e-16 87.8 67 73.1
SalBow7G4182 Salvia bowleyana HOM05D007161 ORTHO05D009103 1.1e-15 87.4 158 60.8
AT5G08050 Arabidopsis thaliana HOM05D007161 ORTHO05D009103 1.4e-15 87.0 92 73.9
Mapoly0107s0029 Marchantia polymorpha HOM05D007161 ORTHO05D009103 1.4e-15 87.0 153 64.1
AUR62008547 Chenopodium quinoa HOM05D007161 ORTHO05D009103 1.8e-15 86.7 158 63.3
SMO139G0085 Selaginella moellendorffii HOM05D007161 ORTHO05D009103 4.1e-15 85.5 123 69.1
Migut.D01637 Erythranthe guttata HOM05D007161 ORTHO05D009103 6.9e-15 84.7 160 64.4
AagrBONN_evm.TU.Sc2ySwM_344.2890 Anthoceros agrestis HOM05D007161 ORTHO05D009103 1.9e-12 76.6 67 64.2
Pp3c1_19210 Physcomitrium patens HOM05D007161 ORTHO05D009103 1.9e-12 76.6 157 56.1
unitig_0.g5 Utricularia gibba HOM05D000887 ORTHO05D000908 2.6e-09 66.2 117 69.2
Peaxi162Scf00009g00010 Petunia axillaris HOM05D007161 ORTHO05D009103 2.2e-08 63.2 54 61.1


User provided reference genes

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