Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_24263 Corchorus olitorius HOM05D006540 ORTHO05D008202 4.4e-147 524.6 267 100.0
Thecc.02G259400 Theobroma cacao HOM05D006540 ORTHO05D008202 8.0e-125 450.7 350 70.0
Gorai.002G186600 Gossypium raimondii HOM05D006540 ORTHO05D008202 5.4e-121 438.0 353 68.6
Gohir.A01G159600 Gossypium hirsutum HOM05D006540 ORTHO05D008202 3.5e-120 435.3 353 68.0
Gohir.D01G150500 Gossypium hirsutum HOM05D006540 ORTHO05D008202 5.9e-120 434.5 353 68.3
Duzib268G1404 Durio zibethinus HOM05D006540 ORTHO05D008202 9.5e-118 427.2 350 66.6
Duzib248G0112 Durio zibethinus HOM05D006540 ORTHO05D008202 5.0e-111 404.8 349 64.5
Ciclev10032003m.g Citrus clementina HOM05D006540 ORTHO05D008202 9.5e-110 400.6 347 64.3
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 3.7e-106 388.7 348 62.6
PGR102G2745 Punica granatum HOM05D006540 ORTHO05D008202 6.4e-106 387.9 349 62.8
CiPaw.05G182700 Carya illinoinensis HOM05D006540 ORTHO05D008202 7.8e-104 380.9 342 64.0
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 1.7e-103 379.8 346 62.1
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 2.3e-103 379.4 353 60.3
Manes.13G024900 Manihot esculenta HOM05D006540 ORTHO05D008202 3.0e-103 379.0 344 61.3
THA.LOC104825662 Tarenaya hassleriana HOM05D006540 ORTHO05D008202 5.0e-103 378.3 348 60.6
Cfa009208 Carpinus fangiana HOM05D006540 ORTHO05D008202 1.9e-102 376.3 344 62.2
Prupe.1G243900 Prunus persica HOM05D006540 ORTHO05D008202 4.7e-101 371.7 349 59.9
TWI18G0987 Tripterygium wilfordii HOM05D006540 ORTHO05D008202 6.2e-101 371.3 352 59.1
RcHm_v2.0_Chr4g0432921 Rosa chinensis HOM05D006540 ORTHO05D008202 5.2e-100 368.2 356 57.9
MD13G1101900 Malus domestica HOM05D006540 ORTHO05D008202 2.6e-99 365.9 351 59.0
Dinv24788 Davidia involucrata HOM05D006540 ORTHO05D008202 4.4e-99 365.2 350 59.4
MD16G1102400 Malus domestica HOM05D006540 ORTHO05D008202 4.4e-99 365.2 353 59.2
QL03p058139 Quercus lobata HOM05D006540 ORTHO05D008202 5.8e-99 364.8 403 53.6
BcaC06g31063 Brassica carinata HOM05D006540 ORTHO05D008202 7.5e-99 364.4 355 57.7
Eucgr.B03288 Eucalyptus grandis HOM05D006540 ORTHO05D008202 7.5e-99 364.4 355 60.3
Aa31LG2G5960 Aethionema arabicum HOM05D006540 ORTHO05D008202 1.3e-98 363.6 355 56.9
BcaC06g33900 Brassica carinata HOM05D006540 ORTHO05D008202 8.3e-98 360.9 351 57.8
C07p35560 Brassica napus HOM05D006540 ORTHO05D008202 8.3e-98 360.9 351 57.8
BolC7t44080H Brassica oleracea HOM05D006540 ORTHO05D008202 8.3e-98 360.9 351 57.8
AL5G15370 Arabidopsis lyrata HOM05D006540 ORTHO05D008202 1.4e-97 360.1 351 57.8
A06p41910 Brassica napus HOM05D006540 ORTHO05D008202 4.1e-97 358.6 355 57.2
BraA06t27110Z Brassica rapa HOM05D006540 ORTHO05D008202 4.1e-97 358.6 355 57.2
FAN07G1259 Fragaria x ananassa HOM05D006540 ORTHO05D008202 4.1e-97 358.6 357 57.1
Sp2g15690 Schrenkiella parvula HOM05D006540 ORTHO05D008202 9.2e-97 357.5 355 56.6
FAN22G2305 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.6e-96 356.7 357 57.7
FAN17G1845 Fragaria x ananassa HOM05D006540 ORTHO05D008202 2.7e-96 355.9 357 57.4
AT3G26580 Arabidopsis thaliana HOM05D006540 ORTHO05D008202 3.5e-96 355.5 352 57.4
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 1.0e-95 354.0 362 56.4
FvH4_4g25530 Fragaria vesca HOM05D006540 ORTHO05D008202 1.0e-95 354.0 357 57.1
FAN12G0822 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.0e-95 354.0 357 57.1
Actinidia15092 Actinidia chinensis HOM05D006540 ORTHO05D008202 3.0e-95 352.4 351 57.0
Carub.0005s0457 Capsella rubella HOM05D006540 ORTHO05D008202 3.0e-95 352.4 351 56.7
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 5.1e-95 351.7 354 57.3
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 6.6e-95 351.3 329 60.2
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 1.9e-94 349.7 356 56.2
Thhalv10004491m.g Eutrema salsugineum HOM05D006540 ORTHO05D008202 1.9e-94 349.7 356 55.9
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 4.3e-94 348.6 332 59.6
MSTRG.568 Avicennia marina HOM05D006540 ORTHO05D008202 9.5e-94 347.4 349 57.0
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea HOM05D006540 ORTHO05D008202 2.8e-93 345.9 339 57.2
Haze_12245 Corylus avellana HOM05D006540 ORTHO05D008202 2.8e-93 345.9 363 57.6
Actinidia37429 Actinidia chinensis HOM05D006540 ORTHO05D008202 4.7e-93 345.1 351 56.1
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea HOM05D006540 ORTHO05D008202 6.2e-93 344.7 339 56.9
vmacro16198 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 1.4e-92 343.6 353 55.0
Lalb_Chr05g0228421 Lupinus albus HOM05D006540 ORTHO05D008202 1.8e-92 343.2 311 61.1
Sc04g0009450 Simmondsia chinensis HOM05D006540 ORTHO05D008202 5.2e-92 341.7 352 56.0
Lj4g0023216 Lotus japonicus HOM05D006540 ORTHO05D008202 1.2e-91 340.5 333 57.7
Rhsim12G0110600 Rhododendron simsii HOM05D006540 ORTHO05D008202 1.2e-91 340.5 357 54.9
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 3.4e-91 339.0 351 55.6
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 3.4e-91 339.0 352 54.5
TAR622G1382 Trochodendron aralioides HOM05D006540 ORTHO05D008202 3.4e-91 339.0 352 55.7
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 2.2e-90 336.3 352 56.5
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 2.9e-90 335.9 223 76.7
Ca_22583_v3 Cicer arietinum L. HOM05D006540 ORTHO05D008202 1.9e-89 333.2 338 57.1
AUR62005459 Chenopodium quinoa HOM05D006540 ORTHO05D008202 3.2e-89 332.4 315 61.6
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 7.1e-89 331.3 307 62.2
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla HOM05D006540 ORTHO05D008202 9.2e-89 330.9 375 53.3
GSVIVG01004073001 Vitis vinifera HOM05D006540 ORTHO05D008202 1.2e-88 330.5 195 82.6
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 1.0e-87 327.4 354 53.7
Nn4g22628 Nelumbo nucifera HOM05D006540 ORTHO05D008202 1.1e-86 323.9 189 83.6
Peaxi162Scf00128g00138 Petunia axillaris HOM05D006540 ORTHO05D008202 3.3e-86 322.4 201 77.6
PGSC0003DMG400018605 Solanum tuberosum HOM05D006540 ORTHO05D008202 4.3e-86 322.0 363 54.3
CAN.G832.5 Capsicum annuum HOM05D006540 ORTHO05D008202 9.6e-86 320.9 193 80.3
Nitab4.5_0000007g0060 Nicotiana tabacum HOM05D006540 ORTHO05D008202 9.6e-86 320.9 361 53.5
Medtr8g069450 Medicago truncatula HOM05D006540 ORTHO05D008202 1.2e-85 320.5 338 55.3
Sopen05g008320 Solanum pennellii HOM05D006540 ORTHO05D008202 3.6e-85 318.9 364 53.3
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 4.7e-85 318.5 221 72.4
Aqoxy3G01202 Aquilegia oxysepala HOM05D006540 ORTHO05D008202 6.2e-85 318.2 348 53.2
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 6.2e-85 318.2 220 72.7
Nitab4.5_0003628g0010 Nicotiana tabacum HOM05D006540 ORTHO05D008202 8.1e-85 317.8 192 79.7
Psat4g116680 Pisum sativum HOM05D006540 ORTHO05D008202 1.8e-84 316.6 346 54.0
vmacro01127 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 2.0e-83 313.2 350 50.9
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 7.6e-83 311.2 343 53.6
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 9.9e-83 310.8 363 51.5
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 1.7e-82 310.1 199 73.4
ECA233G5619 Erigeron canadensis HOM05D006540 ORTHO05D008202 1.7e-82 310.1 197 77.7
HanXRQChr08g0208131 Helianthus annuus HOM05D006540 ORTHO05D008202 2.9e-82 309.3 191 78.0
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 8.4e-82 307.8 199 72.9
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 7.1e-81 304.7 199 75.4
DCAR_024432 Daucus carota HOM05D006540 ORTHO05D008202 1.2e-80 303.9 179 82.1
Ah.03g133040 Amaranthus hybridus HOM05D006540 ORTHO05D008202 6.0e-80 301.6 197 75.6
MBI10_g13027_MAGBIO Magnolia biondii HOM05D006540 ORTHO05D008202 9.6e-78 294.3 212 72.2
PSO017G4849 Papaver somniferum HOM05D006540 ORTHO05D008202 3.1e-76 289.3 209 67.9
Rhsim12G0041000 Rhododendron simsii HOM05D006540 ORTHO05D008202 3.1e-76 289.3 427 43.3
unitig_21.g20872 Utricularia gibba HOM05D006540 ORTHO05D008202 1.6e-72 276.9 201 68.7
HPP92_002022 Vanilla planifolia HOM05D006540 ORTHO05D008202 1.1e-70 270.8 200 65.0
MELO3C011955.2 Cucumis melo HOM05D006540 ORTHO05D008202 2.1e-69 266.5 283 56.9
TPR.G17765 Trifolium pratense HOM05D006540 ORTHO05D008202 4.8e-69 265.4 162 82.1
CsaV3_5G031170 Cucumis sativus L. HOM05D006540 ORTHO05D008202 1.8e-68 263.5 276 57.2
Sed0005489 Sechium edule HOM05D006540 ORTHO05D008202 2.9e-66 256.1 276 55.8
TAR374G0845 Trochodendron aralioides HOM05D006540 ORTHO05D008202 1.4e-65 253.8 282 55.3
PSO478G4529 Papaver somniferum HOM05D006540 ORTHO05D008202 1.6e-64 250.4 172 72.7
Os03g0428800 Oryza sativa ssp. japonica HOM05D006540 ORTHO05D008202 3.3e-62 242.7 201 62.7
Zm00001eb096140 Zea mays HOM05D006540 ORTHO05D008202 1.1e-60 237.7 189 64.0
VMungo0251G1250 Vigna mungo HOM05D006540 ORTHO05D008202 9.0e-60 234.6 269 53.5
BcaB01g00564 Brassica carinata HOM05D006540 ORTHO05D008202 1.5e-59 233.8 145 76.6
Mapoly0037s0067 Marchantia polymorpha HOM05D006540 ORTHO05D008202 1.1e-52 211.1 218 50.5
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis HOM05D006540 ORTHO05D008202 1.5e-51 207.2 219 47.5
SEGI_37038 Sequoiadendron giganteum HOM05D006540 ORTHO05D008202 1.2e-48 197.6 172 53.5
SMO347G0417 Selaginella moellendorffii HOM05D006540 ORTHO05D008202 2.1e-48 196.8 181 52.5
Pp3c27_6670 Physcomitrium patens HOM05D006540 ORTHO05D008202 1.8e-44 183.7 187 48.1
BcaC06g33898 Brassica carinata HOM05D006540 ORTHO05D008202 1.7e-29 134.0 82 76.8
Cre12.g528050 Chlamydomonas reinhardtii HOM05D006540 ORTHO05D008202 8.2e-21 105.1 138 39.9
Oeu029879.1 Olea europaea HOM05D006540 ORTHO05D008202 2.4e-20 103.6 72 70.8
CBR_g8379 Chara braunii HOM05D006540 ORTHO05D008202 3.1e-20 103.2 132 40.9
MCO07G599 Micromonas commoda HOM05D006540 ORTHO05D008202 1.0e-18 98.2 193 34.7
RcHm_v2.0_Chr5g0067811 Rosa chinensis HOM05D006540 ORTHO05D008202 4.2e-17 92.8 49 89.8
PRCOL_00004949 Prasinoderma coloniale HOM05D006540 ORTHO05D008202 1.4e-15 87.8 185 29.7
QL04p066147 Quercus lobata HOM05D006540 ORTHO05D008202 1.2e-11 74.7 52 69.2
unitig_744.g24293 Utricularia gibba HOM05D006540 ORTHO05D008202 7.7e-11 72.0 44 70.5


User provided reference genes

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