Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_24184 Corchorus olitorius HOM05D003495 ORTHO05D004159 3.4e-217 758.1 385 100.0
Thecc.02G251800 Theobroma cacao HOM05D003495 ORTHO05D004159 5.2e-210 734.2 380 97.4
Gohir.A03G138900 Gossypium hirsutum HOM05D003495 ORTHO05D004159 1.7e-200 702.6 380 94.5
Gohir.D02G161860 Gossypium hirsutum HOM05D003495 ORTHO05D004159 1.7e-200 702.6 380 94.5
Gorai.005G181800 Gossypium raimondii HOM05D003495 ORTHO05D004159 1.7e-200 702.6 380 94.5
Duzib268G1709 Durio zibethinus HOM05D003495 ORTHO05D004159 2.4e-199 698.7 380 93.7
Duzib248G1077 Durio zibethinus HOM05D003495 ORTHO05D004159 1.3e-197 693.0 380 92.6
Cpa.g.sc14.256 Carica papaya HOM05D003495 ORTHO05D004159 6.2e-195 684.1 380 92.1
Gorai.002G166500 Gossypium raimondii HOM05D003495 ORTHO05D004159 6.2e-195 684.1 380 90.8
Manes.01G104801 Manihot esculenta HOM05D003495 ORTHO05D004159 2.4e-194 682.2 380 91.8
Haze_14358 Corylus avellana HOM05D003495 ORTHO05D004159 1.3e-192 676.4 380 91.1
Ciclev10010888m.g Citrus clementina HOM05D003495 ORTHO05D004159 3.8e-192 674.9 380 91.1
MELO3C022060.2 Cucumis melo HOM05D003495 ORTHO05D004159 4.9e-192 674.5 380 89.2
CsaV3_5G038800 Cucumis sativus L. HOM05D003495 ORTHO05D004159 1.1e-191 673.3 380 89.2
CANSAT64G2734 Cannabis sativa HOM05D003495 ORTHO05D004159 1.4e-191 672.9 380 90.3
MD17G1067900 Malus domestica HOM05D003495 ORTHO05D004159 4.2e-191 671.4 380 89.7
Prupe.3G246500 Prunus persica HOM05D003495 ORTHO05D004159 4.2e-191 671.4 380 90.0
MD09G1077600 Malus domestica HOM05D003495 ORTHO05D004159 9.3e-191 670.2 380 89.7
FvH4_6g46050 Fragaria vesca HOM05D003495 ORTHO05D004159 2.7e-190 668.7 380 89.2
Cfa007716 Carpinus fangiana HOM05D003495 ORTHO05D004159 3.5e-190 668.3 380 90.3
FAN09G4792 Fragaria x ananassa HOM05D003495 ORTHO05D004159 7.8e-190 667.2 380 88.7
TWI60G0296 Tripterygium wilfordii HOM05D003495 ORTHO05D004159 1.7e-189 666.0 380 90.3
FAN14G1484 Fragaria x ananassa HOM05D003495 ORTHO05D004159 3.0e-189 665.2 380 88.7
QL02p063585 Quercus lobata HOM05D003495 ORTHO05D004159 3.0e-189 665.2 380 90.0
Atru.chr8.588 Acer truncatum HOM05D003495 ORTHO05D004159 6.6e-189 664.1 380 88.4
Medtr6g016215 Medicago truncatula HOM05D003495 ORTHO05D004159 6.6e-189 664.1 380 88.7
RcHm_v2.0_Chr2g0164371 Rosa chinensis HOM05D003495 ORTHO05D004159 2.5e-188 662.1 380 88.2
arahy.Tifrunner.gnm1.ann1.AQF1TQ Arachis hypogaea HOM05D003495 ORTHO05D004159 3.3e-188 661.8 381 88.5
Potri.017G106100 Populus trichocarpa HOM05D003495 ORTHO05D004159 5.6e-188 661.0 380 90.0
Sp6g28440 Schrenkiella parvula HOM05D003495 ORTHO05D004159 5.6e-188 661.0 380 87.1
CARHR197650 Cardamine hirsuta HOM05D003495 ORTHO05D004159 9.6e-188 660.2 380 87.6
Thhalv10012410m.g Eutrema salsugineum HOM05D003495 ORTHO05D004159 1.3e-187 659.8 380 87.9
TPR.G15949 Trifolium pratense HOM05D003495 ORTHO05D004159 1.3e-187 659.8 380 88.7
arahy.Tifrunner.gnm1.ann1.BVET7T Arachis hypogaea HOM05D003495 ORTHO05D004159 1.6e-187 659.4 380 88.2
Ca_20758_v3 Cicer arietinum L. HOM05D003495 ORTHO05D004159 2.1e-187 659.1 380 87.9
Lalb_Chr02g0158651 Lupinus albus HOM05D003495 ORTHO05D004159 2.1e-187 659.1 380 87.6
Sed0015478 Sechium edule HOM05D003495 ORTHO05D004159 4.8e-187 657.9 380 88.2
Lj2g0019402 Lotus japonicus HOM05D003495 ORTHO05D004159 6.2e-187 657.5 380 87.4
Sed0005421 Sechium edule HOM05D003495 ORTHO05D004159 8.1e-187 657.1 383 86.2
FAN02G1990 Fragaria x ananassa HOM05D003495 ORTHO05D004159 2.4e-186 655.6 402 84.1
THA.LOC104820987 Tarenaya hassleriana HOM05D003495 ORTHO05D004159 2.4e-186 655.6 380 87.1
AL6G26520 Arabidopsis lyrata HOM05D003495 ORTHO05D004159 3.1e-186 655.2 380 86.8
THA.LOC104802983 Tarenaya hassleriana HOM05D003495 ORTHO05D004159 3.1e-186 655.2 380 87.6
AT5G15680 Arabidopsis thaliana HOM05D003495 ORTHO05D004159 6.9e-186 654.1 380 86.8
BcaC03g18444 Brassica carinata HOM05D003495 ORTHO05D004159 6.9e-186 654.1 380 86.6
A02p03170 Brassica napus HOM05D003495 ORTHO05D004159 6.9e-186 654.1 380 86.6
C02p07920 Brassica napus HOM05D003495 ORTHO05D004159 6.9e-186 654.1 380 86.6
BolC2t06715H Brassica oleracea HOM05D003495 ORTHO05D004159 6.9e-186 654.1 380 86.6
Dinv33880 Davidia involucrata HOM05D003495 ORTHO05D004159 6.9e-186 654.1 380 87.6
Aa31LG11G13890 Aethionema arabicum HOM05D003495 ORTHO05D004159 9.0e-186 653.7 380 86.6
Carub.0006s1383 Capsella rubella HOM05D003495 ORTHO05D004159 1.2e-185 653.3 380 86.6
BraA02t05287Z Brassica rapa HOM05D003495 ORTHO05D004159 2.0e-185 652.5 380 86.3
BcaNung02199 Brassica carinata HOM05D003495 ORTHO05D004159 2.6e-185 652.1 380 86.3
vmacro05603 Vaccinium macrocarpon HOM05D003495 ORTHO05D004159 2.6e-185 652.1 380 86.8
Sopen02g034150 Solanum pennellii HOM05D003495 ORTHO05D004159 4.5e-185 651.4 380 87.1
Glyma.19G037200 Glycine max HOM05D003495 ORTHO05D004159 5.8e-185 651.0 381 87.7
Peaxi162Scf00020g02133 Petunia axillaris HOM05D003495 ORTHO05D004159 5.8e-185 651.0 380 87.1
Solyc02g089370.2 Solanum lycopersicum HOM05D003495 ORTHO05D004159 5.8e-185 651.0 380 87.1
Nitab4.5_0002171g0110 Nicotiana tabacum HOM05D003495 ORTHO05D004159 2.9e-184 648.7 380 87.1
Actinidia18095 Actinidia chinensis HOM05D003495 ORTHO05D004159 8.4e-184 647.1 380 86.3
Nitab4.5_0002978g0060 Nicotiana tabacum HOM05D003495 ORTHO05D004159 1.4e-183 646.4 380 86.8
CSS0005441 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 1.9e-183 646.0 380 86.8
CSS0018508 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 1.9e-183 646.0 380 86.8
FAN05G3267 Fragaria x ananassa HOM05D003495 ORTHO05D004159 6.0e-182 641.0 374 86.6
Oeu062191.1 Olea europaea HOM05D003495 ORTHO05D004159 6.0e-182 641.0 380 86.1
Glyma.11G061700 Glycine max HOM05D003495 ORTHO05D004159 1.0e-181 640.2 380 86.6
ClCG11G005050 Citrullus lanatus HOM05D003495 ORTHO05D004159 1.8e-181 639.4 380 86.1
Peaxi162Scf00479g01011 Petunia axillaris HOM05D003495 ORTHO05D004159 1.8e-181 639.4 382 85.9
A03p07290 Brassica napus HOM05D003495 ORTHO05D004159 3.0e-181 638.6 380 85.3
Cc07_g04650 Coffea canephora HOM05D003495 ORTHO05D004159 3.9e-181 638.3 380 84.7
DCAR_011000 Daucus carota HOM05D003495 ORTHO05D004159 8.7e-181 637.1 380 85.3
Dinv34893 Davidia involucrata HOM05D003495 ORTHO05D004159 1.9e-180 636.0 380 85.8
CAN.G497.44 Capsicum annuum HOM05D003495 ORTHO05D004159 3.3e-180 635.2 380 85.5
SGA_v2.0_scaffold148G36460 Striga asiatica HOM05D003495 ORTHO05D004159 3.3e-180 635.2 381 86.1
C03p08360 Brassica napus HOM05D003495 ORTHO05D004159 5.6e-180 634.4 380 84.5
Hma1.2p1_0588F.1_g184640 Hydrangea macrophylla HOM05D003495 ORTHO05D004159 2.8e-179 632.1 429 78.1
Migut.K00878 Erythranthe guttata HOM05D003495 ORTHO05D004159 4.8e-179 631.3 380 85.8
Solyc03g046450.3 Solanum lycopersicum HOM05D003495 ORTHO05D004159 1.1e-178 630.2 380 84.7
Sopen03g010670 Solanum pennellii HOM05D003495 ORTHO05D004159 1.1e-178 630.2 380 84.7
Phvul.004G045000 Phaseolus vulgaris HOM05D003495 ORTHO05D004159 2.4e-178 629.0 380 86.1
Lj4C126G12 Lonicera japonica HOM05D003495 ORTHO05D004159 6.9e-178 627.5 380 85.5
MSTRG.3380 Avicennia marina HOM05D003495 ORTHO05D004159 9.0e-178 627.1 380 84.7
VMungo0464G0617 Vigna mungo HOM05D003495 ORTHO05D004159 9.0e-178 627.1 380 85.8
ECA232G2419 Erigeron canadensis HOM05D003495 ORTHO05D004159 3.4e-177 625.2 380 83.7
GSVIVG01036514001 Vitis vinifera HOM05D003495 ORTHO05D004159 3.4e-177 625.2 380 84.7
Oeu032840.1 Olea europaea HOM05D003495 ORTHO05D004159 5.8e-177 624.4 365 86.3
BraA03t10052Z Brassica rapa HOM05D003495 ORTHO05D004159 7.6e-177 624.0 401 80.5
Nn7g37976 Nelumbo nucifera HOM05D003495 ORTHO05D004159 1.7e-176 622.9 381 84.8
BolC3t13343H Brassica oleracea HOM05D003495 ORTHO05D004159 2.9e-176 622.1 401 80.0
AUR62002798 Chenopodium quinoa HOM05D003495 ORTHO05D004159 6.4e-176 620.9 380 83.4
CAN.G563.4 Capsicum annuum HOM05D003495 ORTHO05D004159 1.9e-175 619.4 380 83.7
CSS0004216 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 3.2e-175 618.6 380 84.2
Sc04g0005950 Simmondsia chinensis HOM05D003495 ORTHO05D004159 3.2e-175 618.6 380 82.6
AUR62014105 Chenopodium quinoa HOM05D003495 ORTHO05D004159 4.2e-175 618.2 380 82.9
Lsat_1_v5_gn_4_173941 Lactuca sativa HOM05D003495 ORTHO05D004159 9.3e-175 617.1 384 82.3
EL10Ac6g14290 Beta vulgaris HOM05D003495 ORTHO05D004159 2.7e-174 615.5 380 83.2
PGR004G1253 Punica granatum HOM05D003495 ORTHO05D004159 4.6e-174 614.8 380 82.4
HanXRQChr15g0464911 Helianthus annuus HOM05D003495 ORTHO05D004159 1.0e-173 613.6 380 83.2
Aqoxy5G03432 Aquilegia oxysepala HOM05D003495 ORTHO05D004159 1.3e-173 613.2 380 82.1
TAR374G0385 Trochodendron aralioides HOM05D003495 ORTHO05D004159 3.9e-173 611.7 381 82.4
Eucgr.I02084 Eucalyptus grandis HOM05D003495 ORTHO05D004159 6.7e-173 610.9 380 82.4
unitig_748.g7268 Utricularia gibba HOM05D003495 ORTHO05D004159 7.4e-172 607.4 380 80.5
HanXRQChr15g0489851 Helianthus annuus HOM05D003495 ORTHO05D004159 1.4e-170 603.2 380 81.1
PSO063G7059 Papaver somniferum HOM05D003495 ORTHO05D004159 1.5e-169 599.7 380 79.7
Psat1g064160 Pisum sativum HOM05D003495 ORTHO05D004159 3.4e-169 598.6 380 81.6
BcaB01g05032 Brassica carinata HOM05D003495 ORTHO05D004159 4.5e-169 598.2 380 80.8
Hund25028 Selenicereus undatus HOM05D003495 ORTHO05D004159 7.6e-169 597.4 380 81.1
Ah.02g128180 Amaranthus hybridus HOM05D003495 ORTHO05D004159 6.5e-168 594.3 393 78.9
TAR622G0597 Trochodendron aralioides HOM05D003495 ORTHO05D004159 4.2e-167 591.7 380 80.0
PSO063G5616 Papaver somniferum HOM05D003495 ORTHO05D004159 2.6e-161 572.4 381 76.6
CSS0011723 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 4.3e-156 555.1 380 77.1
Hund20736 Selenicereus undatus HOM05D003495 ORTHO05D004159 7.4e-156 554.3 371 77.9
Os02g0830801 Oryza sativa ssp. japonica HOM05D003495 ORTHO05D004159 4.5e-153 545.0 380 73.2
Zm00001eb190620 Zea mays HOM05D003495 ORTHO05D004159 1.7e-152 543.1 380 72.4
ATR0618G126 Amborella trichopoda HOM05D003495 ORTHO05D004159 5.0e-152 541.6 381 73.2
HanXRQChr14g0447961 Helianthus annuus HOM05D003495 ORTHO05D004159 3.6e-150 535.4 379 71.8
HPP92_025566 Vanilla planifolia HOM05D003495 ORTHO05D004159 3.9e-149 531.9 381 73.0
CDE04G3053 Ceratophyllum demersum HOM05D003495 ORTHO05D004159 7.4e-148 527.7 384 72.4
ECA238G4655 Erigeron canadensis HOM05D003495 ORTHO05D004159 7.4e-148 527.7 379 70.4
Lsat_1_v5_gn_2_85980 Lactuca sativa HOM05D003495 ORTHO05D004159 2.6e-140 502.7 379 67.3
SEGI_22880 Sequoiadendron giganteum HOM05D003495 ORTHO05D004159 1.0e-136 490.7 431 61.9
Mapoly0124s0011 Marchantia polymorpha HOM05D003495 ORTHO05D004159 3.8e-120 435.6 428 56.3
SMO351G0561 Selaginella moellendorffii HOM05D003495 ORTHO05D004159 8.6e-112 407.9 382 57.9
AagrBONN_evm.TU.Sc2ySwM_228.311 Anthoceros agrestis HOM05D003495 ORTHO05D004159 4.1e-106 389.0 422 51.7
Pp3c13_5370 Physcomitrium patens HOM05D003495 ORTHO05D004159 9.5e-103 377.9 414 52.4
Pp3c12_3160 Physcomitrium patens HOM05D003495 ORTHO05D004159 4.0e-101 372.5 425 51.5
Pp3c3_1860 Physcomitrium patens HOM05D003495 ORTHO05D004159 2.6e-100 369.8 419 51.1
Nitab4.5_0001397g0040 Nicotiana tabacum HOM05D003495 ORTHO05D004159 5.2e-93 345.5 216 83.8
Actinidia36276 Actinidia chinensis HOM05D003495 ORTHO05D004159 6.2e-86 322.0 179 88.8
Nitab4.5_0000154g0080 Nicotiana tabacum HOM05D003495 ORTHO05D004159 1.1e-77 294.7 166 88.0
CBR_g31516 Chara braunii HOM05D003495 ORTHO05D004159 7.8e-73 278.5 492 37.6
Psat5g191680 Pisum sativum HOM05D003495 ORTHO05D004159 5.0e-43 179.5 119 79.0
Actinidia36277 Actinidia chinensis HOM05D003495 ORTHO05D004159 3.4e-36 156.8 115 70.4
CAN.G497.66 Capsicum annuum HOM05D003495 ORTHO05D004159 3.6e-33 146.7 287 37.6
CAN.G497.67 Capsicum annuum HOM05D003495 ORTHO05D004159 1.0e-32 145.2 78 85.9
Hma1.2p1_2186F.1_g316380 Hydrangea macrophylla HOM05D003495 ORTHO05D004159 1.8e-29 134.4 152 53.3
CAN.G497.59 Capsicum annuum HOM05D003495 ORTHO05D004159 1.8e-24 117.9 72 80.6
FAN14G3604 Fragaria x ananassa HOM05D003495 ORTHO05D004159 2.3e-24 117.5 64 92.2
CiPaw.03G081200 Carya illinoinensis HOM05D003495 ORTHO05D004159 2.9e-19 100.5 47 97.9


User provided reference genes

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