Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 4.9e-78 294.3 137 100.0
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 1.8e-59 232.6 137 79.6
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 4.8e-57 224.6 137 79.6
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 4.8e-57 224.6 137 79.6
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 1.4e-56 223.0 137 77.4
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 1.8e-56 222.6 137 78.1
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 1.2e-55 219.9 134 79.9
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 4.5e-55 218.0 134 77.6
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 5.8e-55 217.6 134 76.9
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 7.6e-55 217.2 137 75.2
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 1.0e-54 216.9 137 75.2
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 1.7e-54 216.1 137 74.5
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 2.2e-54 215.7 137 74.5
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 2.2e-54 215.7 137 74.5
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 2.2e-54 215.7 137 74.5
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 2.2e-54 215.7 134 76.9
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 1.1e-53 213.4 134 73.1
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 1.1e-53 213.4 134 73.9
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 1.1e-53 213.4 135 74.8
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 1.1e-53 213.4 137 73.7
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 1.9e-53 212.6 137 74.5
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 3.2e-53 211.8 134 73.1
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 3.2e-53 211.8 134 73.1
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 3.2e-53 211.8 134 73.1
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 3.2e-53 211.8 133 74.4
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 4.2e-53 211.5 134 75.4
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 4.2e-53 211.5 134 73.1
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 7.1e-53 210.7 133 73.7
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 7.1e-53 210.7 134 72.4
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 2.1e-52 209.1 134 74.6
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 2.1e-52 209.1 137 72.3
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 2.1e-52 209.1 137 71.5
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 2.7e-52 208.8 137 71.5
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 3.5e-52 208.4 137 71.5
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 4.6e-52 208.0 137 71.5
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 4.6e-52 208.0 137 70.8
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 7.9e-52 207.2 137 70.8
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 7.9e-52 207.2 134 70.9
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 1.3e-51 206.5 133 72.9
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 1.3e-51 206.5 134 72.4
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 1.3e-51 206.5 137 70.1
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 1.8e-51 206.1 137 72.3
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 2.3e-51 205.7 137 71.5
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 3.0e-51 205.3 137 73.0
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 3.9e-51 204.9 135 71.1
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 3.9e-51 204.9 133 72.2
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 5.1e-51 204.5 137 68.6
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 5.1e-51 204.5 137 70.8
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 8.7e-51 203.8 134 71.6
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 1.1e-50 203.4 134 71.6
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 1.5e-50 203.0 137 69.3
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 1.9e-50 202.6 134 72.4
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 4.3e-50 201.4 134 68.7
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 5.7e-50 201.1 133 71.4
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 5.7e-50 201.1 134 70.1
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 7.4e-50 200.7 134 70.1
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 9.7e-50 200.3 134 70.9
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 1.3e-49 199.9 134 69.4
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 1.6e-49 199.5 133 70.7
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 2.8e-49 198.7 134 66.4
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 4.8e-49 198.0 134 69.4
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 4.8e-49 198.0 134 66.4
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 6.3e-49 197.6 137 67.2
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 8.2e-49 197.2 134 68.7
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 8.2e-49 197.2 134 69.4
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 8.2e-49 197.2 134 71.6
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 1.1e-48 196.8 134 70.1
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 1.1e-48 196.8 179 57.5
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 1.4e-48 196.4 137 70.1
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 3.1e-48 195.3 137 65.7
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 5.3e-48 194.5 133 69.2
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 9.0e-48 193.7 133 68.4
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 9.0e-48 193.7 133 67.7
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 1.5e-47 193.0 137 66.4
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 2.0e-47 192.6 137 67.9
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 4.5e-47 191.4 134 69.4
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 1.7e-46 189.5 134 66.4
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 5.5e-45 184.5 135 65.2
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 4.6e-44 181.4 133 64.7
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 4.6e-44 181.4 134 65.7
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 2.3e-43 179.1 134 64.9
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 5.7e-42 174.5 133 62.4
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 2.2e-41 172.6 133 60.9
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 1.4e-40 169.9 135 60.7
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 5.3e-40 167.9 130 65.4
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 2.6e-39 165.6 135 59.3
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 2.6e-39 165.6 135 59.3
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 2.6e-39 165.6 135 59.3
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 4.5e-39 164.9 135 58.5
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 4.5e-39 164.9 135 58.5
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 1.3e-38 163.3 135 58.5
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 2.2e-38 162.5 231 40.7
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 6.5e-38 161.0 135 58.5
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 1.1e-37 160.2 135 57.8
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 1.1e-37 160.2 137 58.4
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 2.5e-37 159.1 136 56.6
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 9.4e-37 157.1 135 57.0
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 9.4e-37 157.1 136 57.4
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 7.9e-36 154.1 135 54.8
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 1.4e-35 153.3 138 52.9
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 2.0e-34 149.4 135 56.3
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 2.6e-34 149.1 134 52.2
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 3.3e-34 148.7 133 51.9
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 5.7e-34 147.9 136 55.1
vmacro13638 Vaccinium macrocarpon HOM05D006442 ORTHO05D007980 8.2e-33 144.1 157 50.3
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 8.2e-33 144.1 137 53.3
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 1.5e-31 139.8 134 50.0
MBI01_g15755_MAGBIO Magnolia biondii HOM05D006442 ORTHO05D007980 5.0e-30 134.8 89 70.8
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 8.5e-30 134.0 135 49.6
CsaV3_3G032370 Cucumis sativus L. HOM05D006442 ORTHO05D007980 2.5e-29 132.5 88 70.5
SMO244G0064 Selaginella moellendorffii HOM05D006442 ORTHO05D007980 5.5e-29 131.3 135 46.7
CAN.G37.7 Capsicum annuum HOM05D006442 ORTHO05D007980 3.6e-28 128.6 104 53.8
Pp3c1_3150 Physcomitrium patens HOM05D006442 ORTHO05D007980 8.0e-28 127.5 135 46.7
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 2.6e-23 112.5 73 68.5
Nitab4.5_0004606g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 2.6e-23 112.5 84 65.5
CBR_g40140 Chara braunii HOM05D006442 ORTHO05D007980 5.9e-23 111.3 118 48.3
MD02G1317000 Malus domestica HOM05D006442 ORTHO05D007980 1.0e-19 100.5 66 71.2
MD01G1062200 Malus domestica HOM05D006442 ORTHO05D007980 5.2e-19 98.2 74 66.2
CsaV3_3G032380 Cucumis sativus L. HOM05D002156 ORTHO05D002328 5.9e-15 84.7 48 75.0
Aa31LG8G5750 Aethionema arabicum HOM05D006442 ORTHO05D007980 1.3e-14 83.6 123 39.8
MELO3C023952.2 Cucumis melo HOM05D002156 ORTHO05D002328 1.7e-14 83.2 48 72.9
CAN.G290.22 Capsicum annuum HOM05D006442 ORTHO05D007980 1.1e-13 80.5 56 60.7
MD00G1052400 Malus domestica HOM05D006442 ORTHO05D007980 3.4e-10 68.9 46 65.2
AL5G40550 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 1.8e-08 63.2 45 57.8
AL8G12830 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 3.1e-08 62.4 56 51.8


User provided reference genes

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