Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_23892 Corchorus olitorius HOM05D005835 ORTHO05D007187 1.7e-86 322.8 181 100.0
Thecc.03G259800 Theobroma cacao HOM05D005835 ORTHO05D007187 7.9e-76 287.3 181 87.3
Duzib068G0435 Durio zibethinus HOM05D005835 ORTHO05D007187 1.7e-73 279.6 181 80.7
Duzib084G0572 Durio zibethinus HOM05D005835 ORTHO05D007187 2.8e-73 278.9 179 87.2
Duzib205G1381 Durio zibethinus HOM05D005835 ORTHO05D007187 1.1e-72 276.9 179 77.7
Gohir.A12G220500 Gossypium hirsutum HOM05D005835 ORTHO05D007187 9.1e-72 273.9 182 81.9
Gohir.D12G222800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.5e-71 273.1 182 80.8
Gorai.008G238900 Gossypium raimondii HOM05D005835 ORTHO05D007187 1.5e-71 273.1 182 80.8
Gohir.D03G159700 Gossypium hirsutum HOM05D005835 ORTHO05D007187 2.6e-66 255.8 181 79.0
Gorai.003G168000 Gossypium raimondii HOM05D005835 ORTHO05D007187 6.3e-65 251.1 181 79.0
Gohir.A03G013800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.4e-64 250.0 181 77.9
Cpa.g.sc29.103 Carica papaya HOM05D005835 ORTHO05D007187 9.4e-53 210.7 181 59.1
Cfa012808 Carpinus fangiana HOM05D005835 ORTHO05D007187 5.7e-50 201.4 180 65.6
Haze_08597 Corylus avellana HOM05D005835 ORTHO05D007187 9.8e-50 200.7 182 57.7
Dinv39089 Davidia involucrata HOM05D005835 ORTHO05D007187 1.4e-48 196.8 177 58.2
Dinv21579 Davidia involucrata HOM05D005835 ORTHO05D007187 7.0e-48 194.5 174 58.6
Nitab4.5_0005230g0060 Nicotiana tabacum HOM05D005835 ORTHO05D007187 9.1e-48 194.1 177 57.1
Potri.003G114200 Populus trichocarpa HOM05D005835 ORTHO05D007187 1.2e-47 193.7 181 53.6
QL03p017823 Quercus lobata HOM05D005835 ORTHO05D007187 3.5e-47 192.2 174 64.4
QL93p2009_0035 Quercus lobata HOM05D005835 ORTHO05D007187 5.9e-47 191.4 174 64.4
Prupe.4G260700 Prunus persica HOM05D005835 ORTHO05D007187 1.3e-46 190.3 181 54.1
Sabra03G0079300 Salix brachista HOM05D005835 ORTHO05D007187 1.3e-46 190.3 181 51.9
Nitab4.5_0005535g0030 Nicotiana tabacum HOM05D005835 ORTHO05D007187 1.7e-46 189.9 177 55.9
Hma1.2p1_2131F.1_g314730 Hydrangea macrophylla HOM05D005835 ORTHO05D007187 6.6e-46 188.0 177 55.4
CAN.G1528.1 Capsicum annuum HOM05D005835 ORTHO05D007187 8.6e-46 187.6 177 54.8
CiPaw.12G105500 Carya illinoinensis HOM05D005835 ORTHO05D007187 1.5e-45 186.8 181 54.7
Atru.chr9.1404 Acer truncatum HOM05D005835 ORTHO05D007187 2.5e-45 186.0 174 55.7
MELO3C013977.2 Cucumis melo HOM05D005835 ORTHO05D007187 4.2e-45 185.3 182 54.9
Manes.01G074300 Manihot esculenta HOM05D005835 ORTHO05D007187 4.2e-45 185.3 181 53.0
Ciclev10022502m.g Citrus clementina HOM05D005835 ORTHO05D007187 5.5e-45 184.9 181 62.4
ClCG10G003070 Citrullus lanatus HOM05D005835 ORTHO05D007187 1.2e-44 183.7 174 56.3
TAR374G0447 Trochodendron aralioides HOM05D005835 ORTHO05D007187 1.2e-44 183.7 171 56.1
Eucgr.E01477 Eucalyptus grandis HOM05D005835 ORTHO05D007187 3.6e-44 182.2 180 55.0
Potri.001G118700 Populus trichocarpa HOM05D005835 ORTHO05D007187 3.6e-44 182.2 181 51.9
PGSC0003DMG400029987 Solanum tuberosum HOM05D005835 ORTHO05D007187 4.7e-44 181.8 177 54.2
Nn1g01126 Nelumbo nucifera HOM05D005835 ORTHO05D007187 6.1e-44 181.4 169 55.6
Sed0018910 Sechium edule HOM05D005835 ORTHO05D007187 8.0e-44 181.0 182 54.4
CANSAT21G1576 Cannabis sativa HOM05D005835 ORTHO05D007187 1.4e-43 180.3 174 61.5
CsaV3_3G003110 Cucumis sativus L. HOM05D005835 ORTHO05D007187 1.4e-43 180.3 182 53.3
CiPaw.11G149200 Carya illinoinensis HOM05D005835 ORTHO05D007187 2.3e-43 179.5 179 51.4
Nn1g01130 Nelumbo nucifera HOM05D005835 ORTHO05D007187 2.3e-43 179.5 169 55.0
TWI81G0081 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 3.0e-43 179.1 180 51.1
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 4.0e-43 178.7 181 51.4
Sabra01G0091600 Salix brachista HOM05D005835 ORTHO05D007187 8.9e-43 177.6 181 55.8
Sopen11g025020 Solanum pennellii HOM05D005835 ORTHO05D007187 8.9e-43 177.6 177 53.1
QL12p014300 Quercus lobata HOM05D005835 ORTHO05D007187 2.0e-42 176.4 172 59.9
Oeu040228.1 Olea europaea HOM05D005835 ORTHO05D007187 3.4e-42 175.6 177 53.7
Solyc11g065270.2 Solanum lycopersicum HOM05D005835 ORTHO05D007187 3.4e-42 175.6 177 52.5
TAR375G0176 Trochodendron aralioides HOM05D005835 ORTHO05D007187 4.4e-42 175.3 171 56.1
Manes.02G034200 Manihot esculenta HOM05D005835 ORTHO05D007187 1.3e-41 173.7 179 49.2
PGR031G1343 Punica granatum HOM05D005835 ORTHO05D007187 1.3e-41 173.7 181 61.3
RcHm_v2.0_Chr7g0202021 Rosa chinensis HOM05D005835 ORTHO05D007187 1.3e-41 173.7 182 58.8
MD04G1080500 Malus domestica HOM05D005835 ORTHO05D007187 2.8e-41 172.6 184 53.8
Rhsim07G0102800 Rhododendron simsii HOM05D005835 ORTHO05D007187 1.4e-40 170.2 170 52.4
FAN13G2021 Fragaria x ananassa HOM05D005835 ORTHO05D007187 2.4e-40 169.5 182 48.9
FAN08G1980 Fragaria x ananassa HOM05D005835 ORTHO05D007187 2.0e-39 166.4 182 47.8
MBI04_g35668_MAGBIO Magnolia biondii HOM05D005835 ORTHO05D007187 2.0e-39 166.4 170 51.8
FvH4_5g00490 Fragaria vesca HOM05D005835 ORTHO05D007187 2.7e-39 166.0 182 48.4
FAN18G1180 Fragaria x ananassa HOM05D005835 ORTHO05D007187 2.7e-39 166.0 182 48.4
FAN04G1493 Fragaria x ananassa HOM05D005835 ORTHO05D007187 1.7e-38 163.3 182 47.8
MSTRG.12070 Avicennia marina HOM05D005835 ORTHO05D007187 2.9e-38 162.5 170 52.9
ECA233G2089 Erigeron canadensis HOM05D005835 ORTHO05D007187 3.9e-38 162.2 171 56.7
Peaxi162Scf00004g03718 Petunia axillaris HOM05D005835 ORTHO05D007187 6.6e-38 161.4 174 49.4
Ah.01g013950 Amaranthus hybridus HOM05D005835 ORTHO05D007187 1.1e-37 160.6 172 46.5
AUR62025857 Chenopodium quinoa HOM05D005835 ORTHO05D007187 1.1e-37 160.6 177 46.3
AUR62029858 Chenopodium quinoa HOM05D005835 ORTHO05D007187 1.9e-37 159.8 177 46.9
THA.LOC104813805 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 1.9e-37 159.8 177 58.8
SalBow6G1585 Salvia bowleyana HOM05D005835 ORTHO05D007187 2.5e-37 159.5 173 49.7
THA.LOC104806344 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 2.5e-37 159.5 177 61.6
HanXRQChr02g0049681 Helianthus annuus HOM05D005835 ORTHO05D007187 4.3e-37 158.7 178 50.6
Aa31LG9G10270 Aethionema arabicum HOM05D005835 ORTHO05D007187 1.2e-36 157.1 183 51.4
Migut.A00824 Erythranthe guttata HOM05D005835 ORTHO05D007187 8.0e-36 154.5 172 50.0
Sc02g0009280 Simmondsia chinensis HOM05D005835 ORTHO05D007187 8.0e-36 154.5 175 47.4
Aqoxy7G00679 Aquilegia oxysepala HOM05D005835 ORTHO05D007187 1.4e-35 153.7 175 53.1
Cc08_g13120 Coffea canephora HOM05D005835 ORTHO05D007187 1.4e-35 153.7 184 47.3
Sc16g0006190 Simmondsia chinensis HOM05D005835 ORTHO05D007187 1.4e-35 153.7 171 47.4
arahy.Tifrunner.gnm1.ann1.7G3HX4 Arachis hypogaea HOM05D005835 ORTHO05D007187 3.1e-35 152.5 176 46.6
Migut.A00868 Erythranthe guttata HOM05D005835 ORTHO05D007187 3.1e-35 152.5 172 49.4
SGA_v2.0_scaffold146G36171 Striga asiatica HOM05D005835 ORTHO05D007187 4.0e-35 152.1 170 48.2
Lalb_Chr16g0389651 Lupinus albus HOM05D005835 ORTHO05D007187 1.5e-34 150.2 181 47.5
HanXRQChr13g0394681 Helianthus annuus HOM05D005835 ORTHO05D007187 2.0e-34 149.8 170 52.9
SGA_v2.0_scaffold120G32837 Striga asiatica HOM05D005835 ORTHO05D007187 2.6e-34 149.4 172 48.3
AL6G47200 Arabidopsis lyrata HOM05D005835 ORTHO05D007187 3.4e-34 149.1 181 48.6
arahy.Tifrunner.gnm1.ann1.4SJ6CH Arachis hypogaea HOM05D005835 ORTHO05D007187 3.4e-34 149.1 171 46.2
EL10Ac4g07900 Beta vulgaris HOM05D005835 ORTHO05D007187 4.4e-34 148.7 172 45.3
Lalb_Chr05g0225471 Lupinus albus HOM05D005835 ORTHO05D007187 4.4e-34 148.7 181 46.4
AT4G12340 Arabidopsis thaliana HOM05D005835 ORTHO05D007187 1.3e-33 147.1 181 46.4
CARHR253910 Cardamine hirsuta HOM05D005835 ORTHO05D007187 2.2e-33 146.4 174 48.3
Hund02098 Selenicereus undatus HOM05D005835 ORTHO05D007187 4.9e-33 145.2 168 45.8
Phvul.003G214325 Phaseolus vulgaris HOM05D005835 ORTHO05D007187 6.4e-33 144.8 184 45.1
VMungo1215G0693 Vigna mungo HOM05D005835 ORTHO05D007187 6.4e-33 144.8 184 46.7
Carub.0006s3148 Capsella rubella HOM05D005835 ORTHO05D007187 1.9e-32 143.3 181 46.4
Glyma.05G051800 Glycine max HOM05D005835 ORTHO05D007187 3.2e-32 142.5 181 50.3
Sp6g05250 Schrenkiella parvula HOM05D005835 ORTHO05D007187 3.2e-32 142.5 173 45.1
CSS0045584 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 4.1e-32 142.1 121 57.9
C02p40850 Brassica napus HOM05D005835 ORTHO05D007187 5.4e-32 141.7 173 44.5
BcaC03g16290 Brassica carinata HOM05D005835 ORTHO05D007187 7.0e-32 141.4 173 44.5
BolC2t10102H Brassica oleracea HOM05D005835 ORTHO05D007187 7.0e-32 141.4 173 44.5
Ca_12275_v3 Cicer arietinum L. HOM05D005835 ORTHO05D007187 2.0e-31 139.8 181 44.2
Psat0s1988g0040 Pisum sativum HOM05D005835 ORTHO05D007187 2.7e-31 139.4 181 43.1
TPR.G37587 Trifolium pratense HOM05D005835 ORTHO05D007187 7.8e-31 137.9 180 43.9
Medtr4g102330 Medicago truncatula HOM05D005835 ORTHO05D007187 1.0e-30 137.5 174 43.7
TWI15G0429 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 2.3e-30 136.3 117 59.0
BcaB01g01732 Brassica carinata HOM05D005835 ORTHO05D007187 6.6e-30 134.8 180 42.2
C09p34190 Brassica napus HOM05D005835 ORTHO05D007187 6.6e-30 134.8 181 44.2
BolC9t56264H Brassica oleracea HOM05D005835 ORTHO05D007187 6.6e-30 134.8 181 44.2
Thhalv10029018m.g Eutrema salsugineum HOM05D005835 ORTHO05D007187 6.6e-30 134.8 175 44.6
A02p25690 Brassica napus HOM05D005835 ORTHO05D007187 1.1e-29 134.0 173 41.6
BcaC04g21221 Brassica carinata HOM05D005835 ORTHO05D007187 1.9e-29 133.3 173 44.5
BraA02t07561Z Brassica rapa HOM05D005835 ORTHO05D007187 1.9e-29 133.3 173 42.2
PSO782G1790 Papaver somniferum HOM05D005835 ORTHO05D007187 5.6e-29 131.7 175 45.7
CDE02G0720 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 1.2e-28 130.6 177 40.1
CDE04G3390 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 1.2e-28 130.6 178 46.1
BcaB05g23754 Brassica carinata HOM05D005835 ORTHO05D007187 2.1e-28 129.8 173 42.2
CARHR253930 Cardamine hirsuta HOM05D005835 ORTHO05D007187 2.1e-28 129.8 109 59.6
A09p26960 Brassica napus HOM05D005835 ORTHO05D007187 2.8e-28 129.4 181 42.0
BraA09t38266Z Brassica rapa HOM05D005835 ORTHO05D007187 2.8e-28 129.4 181 42.0
PSO478G0096 Papaver somniferum HOM05D005835 ORTHO05D007187 2.8e-28 129.4 176 46.0
Zm00001eb356210 Zea mays HOM05D005835 ORTHO05D007187 1.1e-27 127.5 184 45.1
GSVIVG01004287001 Vitis vinifera HOM05D005835 ORTHO05D007187 1.4e-27 127.1 169 45.6
GSVIVG01007420001 Vitis vinifera HOM05D005835 ORTHO05D007187 1.4e-27 127.1 169 45.6
Os05g0103500 Oryza sativa ssp. japonica HOM05D005835 ORTHO05D007187 1.8e-27 126.7 179 41.9
HPP92_005292 Vanilla planifolia HOM05D005835 ORTHO05D007187 1.7e-25 120.2 176 41.5
CSS0008349 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 1.4e-24 117.1 172 40.7
Lsat_1_v5_gn_6_4381 Lactuca sativa HOM05D005835 ORTHO05D007187 2.4e-24 116.3 169 42.6
SHI20590 Sapria himalayana HOM05D005835 ORTHO05D007187 3.0e-22 109.4 178 37.6
ATR0115G012 Amborella trichopoda HOM05D005835 ORTHO05D007187 5.1e-22 108.6 178 40.4
Actinidia05173 Actinidia chinensis HOM05D005835 ORTHO05D000538 7.5e-18 94.7 109 49.5
Mapoly0001s0295 Marchantia polymorpha HOM05D005835 ORTHO05D007187 5.4e-16 88.6 184 32.1
SEGI_03973 Sequoiadendron giganteum HOM05D005835 ORTHO05D007187 7.1e-16 88.2 177 35.6
Pp3c15_5650 Physcomitrium patens HOM05D005835 ORTHO05D007187 1.9e-08 63.5 89 36.0
CBR_g50926 Chara braunii HOM05D005835 ORTHO05D007187 2.4e-08 63.2 115 34.8
Pp3c8_11610 Physcomitrium patens HOM05D005835 ORTHO05D007187 6.0e-07 58.5 89 31.5


User provided reference genes

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