Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_23731 Corchorus olitorius HOM05D005287 ORTHO05D006893 6.5e-45 186.4 98 100.0
Thecc.10G068400 Theobroma cacao HOM05D005287 ORTHO05D006893 9.4e-36 156.0 79 92.4
Gohir.A04G096900 Gossypium hirsutum HOM05D005287 ORTHO05D006893 1.2e-35 155.6 79 89.9
Gohir.D04G136700 Gossypium hirsutum HOM05D005287 ORTHO05D006893 1.2e-35 155.6 79 89.9
Gorai.012G120500 Gossypium raimondii HOM05D005287 ORTHO05D006893 1.2e-35 155.6 79 89.9
Duzib114G0447 Durio zibethinus HOM05D005287 ORTHO05D006893 5.7e-33 146.7 78 88.5
Lalb_Chr06g0171161 Lupinus albus HOM05D005287 ORTHO05D006893 2.0e-22 111.7 79 63.3
Sed0021424 Sechium edule HOM05D005287 ORTHO05D006893 1.1e-20 105.9 79 58.2
Aqoxy5G00866 Aquilegia oxysepala HOM05D005287 ORTHO05D006893 1.9e-20 105.1 79 54.4
Potri.010G217600 Populus trichocarpa HOM05D005287 ORTHO05D006893 2.1e-19 101.7 79 59.5
Cfa001595 Carpinus fangiana HOM05D005287 ORTHO05D006893 3.6e-19 100.9 79 59.5
Psat6g186200 Pisum sativum HOM05D005287 ORTHO05D006893 3.6e-19 100.9 79 62.0
Sabra10G0168300 Salix brachista HOM05D005287 ORTHO05D006893 6.1e-19 100.1 79 58.2
Manes.10G042800 Manihot esculenta HOM05D005287 ORTHO05D006893 8.0e-19 99.8 94 56.4
Glyma.10G213600 Glycine max HOM05D005287 ORTHO05D006893 1.0e-18 99.4 79 57.0
ClCG02G013900 Citrullus lanatus HOM05D005287 ORTHO05D006893 1.4e-18 99.0 79 58.2
Cfa001592 Carpinus fangiana HOM05D005287 ORTHO05D006893 1.8e-18 98.6 79 58.2
Ciclev10033834m.g Citrus clementina HOM05D005287 ORTHO05D006893 1.8e-18 98.6 80 58.8
CsaV3_5G006270 Cucumis sativus L. HOM05D005287 ORTHO05D006893 1.8e-18 98.6 77 58.4
Atru.chr12.633 Acer truncatum HOM05D005287 ORTHO05D006893 2.3e-18 98.2 80 61.2
Eucgr.G02802 Eucalyptus grandis HOM05D005287 ORTHO05D006893 2.3e-18 98.2 80 57.5
arahy.Tifrunner.gnm1.ann1.JQA4UT Arachis hypogaea HOM05D005287 ORTHO05D006893 3.0e-18 97.8 81 58.0
Haze_16934 Corylus avellana HOM05D005287 ORTHO05D006893 3.0e-18 97.8 79 58.2
HanXRQChr09g0246581 Helianthus annuus HOM05D005287 ORTHO05D006893 3.0e-18 97.8 79 58.2
CiPaw.01G276400 Carya illinoinensis HOM05D005287 ORTHO05D006893 5.2e-18 97.1 78 56.4
MD07G1179000 Malus domestica HOM05D005287 ORTHO05D006893 5.2e-18 97.1 79 58.2
arahy.Tifrunner.gnm1.ann1.NBNI0E Arachis hypogaea HOM05D005287 ORTHO05D006893 6.8e-18 96.7 81 56.8
CSS0048123 Camellia sinensis var. sinensis HOM05D005287 ORTHO05D006893 6.8e-18 96.7 79 53.2
arahy.Tifrunner.gnm1.ann1.IRN669 Arachis hypogaea HOM05D005287 ORTHO05D006893 1.2e-17 95.9 81 56.8
CANSAT54G2917 Cannabis sativa HOM05D005287 ORTHO05D006893 1.2e-17 95.9 79 53.2
arahy.Tifrunner.gnm1.ann1.VE562J Arachis hypogaea HOM05D005287 ORTHO05D006893 1.5e-17 95.5 81 56.8
MELO3C011729.2 Cucumis melo HOM05D005287 ORTHO05D006893 1.5e-17 95.5 77 57.1
arahy.Tifrunner.gnm1.ann1.W4HSG5 Arachis hypogaea HOM05D005287 ORTHO05D006893 2.0e-17 95.1 81 56.8
QL08p056824 Quercus lobata HOM05D005287 ORTHO05D006893 2.6e-17 94.7 79 54.4
Peaxi162Scf00016g01355 Petunia axillaris HOM05D005287 ORTHO05D006893 3.4e-17 94.4 79 54.4
MD01G1131000 Malus domestica HOM05D005287 ORTHO05D006893 4.4e-17 94.0 79 57.0
Prupe.2G218100 Prunus persica HOM05D005287 ORTHO05D006893 4.4e-17 94.0 79 57.0
RcHm_v2.0_Chr1g0364091 Rosa chinensis HOM05D005287 ORTHO05D006893 5.7e-17 93.6 79 55.7
PGR142G4068 Punica granatum HOM05D005287 ORTHO05D006893 9.8e-17 92.8 80 52.5
arahy.Tifrunner.gnm1.ann1.VJ1NN4 Arachis hypogaea HOM05D005287 ORTHO05D006893 1.3e-16 92.4 81 55.6
Dinv11806 Davidia involucrata HOM05D005287 ORTHO05D006893 1.3e-16 92.4 77 53.2
SHI08859 Sapria himalayana HOM05D005287 ORTHO05D006893 1.3e-16 92.4 79 51.9
Actinidia38253 Actinidia chinensis HOM05D005287 ORTHO05D006893 2.2e-16 91.7 95 49.5
Lj5g0006814 Lotus japonicus HOM05D005287 ORTHO05D006893 2.9e-16 91.3 79 55.7
Nn5g30586 Nelumbo nucifera HOM05D005287 ORTHO05D006893 2.9e-16 91.3 80 51.2
Aa31LG8G14080 Aethionema arabicum HOM05D005287 ORTHO05D006893 3.7e-16 90.9 74 56.8
Ah.16g108250 Amaranthus hybridus HOM05D005287 ORTHO05D006893 3.7e-16 90.9 79 55.7
arahy.Tifrunner.gnm1.ann1.K64M7Y Arachis hypogaea HOM05D005287 ORTHO05D006893 4.9e-16 90.5 81 54.3
A07p04270 Brassica napus HOM05D005287 ORTHO05D006893 6.3e-16 90.1 74 58.1
BraA07t28218Z Brassica rapa HOM05D005287 ORTHO05D006893 6.3e-16 90.1 74 58.1
Rhsim06G0174700 Rhododendron simsii HOM05D005287 ORTHO05D006893 6.3e-16 90.1 79 51.9
FAN03G3353 Fragaria x ananassa HOM05D005287 ORTHO05D006893 1.1e-15 89.4 79 51.9
arahy.Tifrunner.gnm1.ann1.TR9913 Arachis hypogaea HOM05D005287 ORTHO05D006893 1.4e-15 89.0 81 54.3
FvH4_7g20132 Fragaria vesca HOM05D005287 ORTHO05D006893 1.8e-15 88.6 79 51.9
FAN06G3074 Fragaria x ananassa HOM05D005287 ORTHO05D006893 1.8e-15 88.6 79 51.9
Medtr1g095880 Medicago truncatula HOM05D005287 ORTHO05D006893 1.8e-15 88.6 79 50.6
FAN10G3161 Fragaria x ananassa HOM05D005287 ORTHO05D006893 2.4e-15 88.2 79 50.6
FAN01G0321 Fragaria x ananassa HOM05D005287 ORTHO05D006893 3.2e-15 87.8 79 50.6
CARHR107150 Cardamine hirsuta HOM05D005287 ORTHO05D006893 9.2e-15 86.3 74 54.1
BcaB03g16413 Brassica carinata HOM05D005287 ORTHO05D006893 1.2e-14 85.9 74 55.4
AL3G49590 Arabidopsis lyrata HOM05D005287 ORTHO05D006893 1.6e-14 85.5 74 52.7
AT2G16880 Arabidopsis thaliana HOM05D005287 ORTHO05D006893 1.6e-14 85.5 74 52.7
TAR376G0736 Trochodendron aralioides HOM05D005287 ORTHO05D006893 2.0e-14 85.1 104 47.1
Hma1.2p1_0286F.1_g114160 Hydrangea macrophylla HOM05D005287 ORTHO05D006893 2.7e-14 84.7 74 48.6
Sc06g0001790 Simmondsia chinensis HOM05D005287 ORTHO05D006893 2.7e-14 84.7 97 48.5
Cc09_g02740 Coffea canephora HOM05D005287 ORTHO05D006893 3.5e-14 84.3 67 58.2
EL10Ac2g03556 Beta vulgaris HOM05D005287 ORTHO05D006893 4.6e-14 84.0 79 48.1
Lsat_1_v5_gn_9_67461 Lactuca sativa HOM05D005287 ORTHO05D006893 4.6e-14 84.0 79 49.4
CAN.G588.65 Capsicum annuum HOM05D005287 ORTHO05D006893 5.9e-14 83.6 67 59.7
Lj1E922T3 Lonicera japonica HOM05D005287 ORTHO05D006893 7.8e-14 83.2 91 49.5
Nitab4.5_0000061g0180 Nicotiana tabacum HOM05D005287 ORTHO05D006893 7.8e-14 83.2 67 59.7
Sp3g30160 Schrenkiella parvula HOM05D005287 ORTHO05D006893 7.8e-14 83.2 74 54.1
Thhalv10022574m.g Eutrema salsugineum HOM05D005287 ORTHO05D006893 1.0e-13 82.8 74 54.1
Actinidia03030 Actinidia chinensis HOM05D005287 ORTHO05D006893 1.3e-13 82.4 92 47.8
TAR628G1500 Trochodendron aralioides HOM05D005287 ORTHO05D006893 1.3e-13 82.4 114 45.6
Migut.F01800 Erythranthe guttata HOM05D005287 ORTHO05D006893 3.9e-13 80.9 73 56.2
PSO566G0007 Papaver somniferum HOM05D005287 ORTHO05D006893 8.6e-13 79.7 80 51.2
MSTRG.8165 Avicennia marina HOM05D005287 ORTHO05D006893 1.5e-12 79.0 81 50.6
Sopen01g053530 Solanum pennellii HOM05D005287 ORTHO05D006893 1.9e-12 78.6 74 47.3
PGSC0003DMG401006177 Solanum tuberosum HOM05D005287 ORTHO05D006893 2.5e-12 78.2 74 48.6
PGSC0003DMG402006177 Solanum tuberosum HOM05D005287 ORTHO05D006893 2.5e-12 78.2 74 48.6
MBI16_g17961_MAGBIO Magnolia biondii HOM05D005287 ORTHO05D006893 9.5e-12 76.3 80 45.0
BcaC06g36186 Brassica carinata HOM05D005287 ORTHO05D006893 2.1e-11 75.1 74 51.4
C07p06750 Brassica napus HOM05D005287 ORTHO05D006893 2.1e-11 75.1 74 51.4
BolC7t41098H Brassica oleracea HOM05D005287 ORTHO05D006893 2.1e-11 75.1 74 51.4
DCAR_001539 Daucus carota HOM05D005287 ORTHO05D006893 2.1e-11 75.1 80 51.2
Solyc01g111470.4 Solanum lycopersicum HOM05D005287 ORTHO05D006893 2.1e-11 75.1 74 45.9
Oeu007697.1 Olea europaea HOM05D005287 ORTHO05D006893 3.6e-11 74.3 88 50.0
SGA_v2.0_scaffold122G33244 Striga asiatica HOM05D005287 ORTHO05D006893 4.7e-11 73.9 81 50.6
TWI15G0219 Tripterygium wilfordii HOM05D005287 ORTHO05D006893 6.1e-11 73.6 52 69.2
VMungo0720G1141 Vigna mungo HOM05D005287 ORTHO05D006893 2.3e-10 71.6 93 39.8
Ca_10593_v3 Cicer arietinum L. HOM05D005287 ORTHO05D006893 3.1e-10 71.2 78 46.2
Phvul.007G091900 Phaseolus vulgaris HOM05D005287 ORTHO05D006893 3.1e-10 71.2 93 40.9
PGSC0003DMG400004236 Solanum tuberosum HOM05D005287 ORTHO05D006893 3.1e-10 71.2 67 49.3
TWI63G1618 Tripterygium wilfordii HOM05D005287 ORTHO05D006893 3.1e-10 71.2 79 46.8
arahy.Tifrunner.gnm1.ann1.V5M9Y5 Arachis hypogaea HOM05D005287 ORTHO05D006893 5.2e-10 70.5 95 41.1
DCAR_015277 Daucus carota HOM05D005287 ORTHO05D006893 5.2e-10 70.5 79 44.3
CDE01G0711 Ceratophyllum demersum HOM05D005287 ORTHO05D006893 6.8e-10 70.1 65 49.2
arahy.Tifrunner.gnm1.ann1.C25YBK Arachis hypogaea HOM05D005287 ORTHO05D006893 8.9e-10 69.7 95 40.0
arahy.Tifrunner.gnm1.ann1.SZH9K7 Arachis hypogaea HOM05D005287 ORTHO05D006893 8.9e-10 69.7 95 40.0
AUR62027913 Chenopodium quinoa HOM05D005287 ORTHO05D006893 9.8e-09 66.2 84 50.0
AUR62043641 Chenopodium quinoa HOM05D005287 ORTHO05D006893 9.8e-09 66.2 84 50.0
THA.LOC104805786 Tarenaya hassleriana HOM05D005287 ORTHO05D006893 9.8e-09 66.2 99 46.5
arahy.Tifrunner.gnm1.ann1.J60LCZ Arachis hypogaea HOM05D005287 ORTHO05D006893 1.3e-08 65.9 92 40.2
AUR62020786 Chenopodium quinoa HOM05D005287 ORTHO05D006893 2.9e-08 64.7 87 47.1
SalBow6G0018 Salvia bowleyana HOM05D005287 ORTHO05D006893 4.9e-08 63.9 71 50.7
arahy.Tifrunner.gnm1.ann1.HZQS8U Arachis hypogaea HOM05D005287 ORTHO05D006893 6.4e-08 63.5 43 69.8
arahy.Tifrunner.gnm1.ann1.4R3XMY Arachis hypogaea HOM05D005287 ORTHO05D006893 1.4e-07 62.4 93 38.7
Cpa.g.sc53.25 Carica papaya HOM05D005287 ORTHO05D006893 5.4e-07 60.5 74 40.5
arahy.Tifrunner.gnm1.ann1.XEFQ2J Arachis hypogaea HOM05D005287 ORTHO05D006893 7.8e-06 56.6 52 57.7


User provided reference genes

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