Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_23100 Corchorus olitorius HOM05D002593 ORTHO05D008082 6.7e-34 146.7 72 100.0
Thecc.01G327600 Theobroma cacao HOM05D002593 ORTHO05D008082 5.5e-28 127.1 69 88.4
Gohir.D07G136800 Gossypium hirsutum HOM05D002593 ORTHO05D008082 7.1e-20 100.1 67 74.6
Gorai.001G148800 Gossypium raimondii HOM05D002593 ORTHO05D008082 7.1e-20 100.1 67 74.6
Gohir.A07G132500 Gossypium hirsutum HOM05D002593 ORTHO05D008082 1.3e-18 95.9 67 71.6
Ciclev10021459m.g Citrus clementina HOM05D002593 ORTHO05D008082 8.7e-18 93.2 63 68.3
Gohir.A08G122100 Gossypium hirsutum HOM05D002593 ORTHO05D008082 2.5e-17 91.7 71 66.2
Gorai.004G147900 Gossypium raimondii HOM05D002593 ORTHO05D008082 2.5e-17 91.7 71 66.2
Gohir.D08G143500 Gossypium hirsutum HOM05D002593 ORTHO05D008082 5.7e-17 90.5 71 66.2
Manes.01G236200 Manihot esculenta HOM05D002593 ORTHO05D008082 7.4e-17 90.1 62 69.4
Cpa.g.sc57.47 Carica papaya HOM05D002593 ORTHO05D008082 3.7e-16 87.8 58 74.1
Actinidia20961 Actinidia chinensis HOM05D002593 ORTHO05D008082 1.1e-15 86.3 60 65.0
Cfa004926 Carpinus fangiana HOM05D002593 ORTHO05D008082 1.4e-15 85.9 60 65.0
Eucgr.K00552 Eucalyptus grandis HOM05D002593 ORTHO05D008082 1.8e-15 85.5 63 68.3
Potri.014G110600 Populus trichocarpa HOM05D002593 ORTHO05D008082 4.1e-15 84.3 52 73.1
Atru.chr5.835 Acer truncatum HOM05D002593 ORTHO05D008082 5.3e-15 84.0 59 66.1
QL09p037436 Quercus lobata HOM05D002593 ORTHO05D008082 5.3e-15 84.0 62 62.9
Sabra02G0130800 Salix brachista HOM05D002593 ORTHO05D008082 6.9e-15 83.6 62 64.5
Potri.002G185100 Populus trichocarpa HOM05D002593 ORTHO05D008082 9.0e-15 83.2 62 62.9
Sabra14G0081400 Salix brachista HOM05D002593 ORTHO05D008082 1.5e-14 82.4 52 69.2
vmacro05322 Vaccinium macrocarpon HOM05D002593 ORTHO05D008082 1.5e-14 82.4 60 63.3
GSVIVG01028225001 Vitis vinifera HOM05D002593 ORTHO05D008082 2.6e-14 81.6 60 63.3
Rhsim10G0121300 Rhododendron simsii HOM05D002593 ORTHO05D008082 5.9e-14 80.5 69 56.5
CSS0008833 Camellia sinensis var. sinensis HOM05D002593 ORTHO05D008082 1.3e-13 79.3 61 59.0
Nitab4.5_0002103g0100 Nicotiana tabacum HOM05D002593 ORTHO05D008082 1.7e-13 79.0 67 55.2
CiPaw.08G081500 Carya illinoinensis HOM05D002593 ORTHO05D008082 2.2e-13 78.6 62 58.1
Nitab4.5_0001628g0060 Nicotiana tabacum HOM05D003479 ORTHO05D004659 2.9e-13 78.2 66 56.1
TAR365G0686 Trochodendron aralioides HOM05D002593 ORTHO05D008082 3.8e-13 77.8 62 59.7
Prupe.3G000900 Prunus persica HOM05D002593 ORTHO05D008082 6.5e-13 77.0 52 67.3
SalBow1G1534 Salvia bowleyana HOM05D002593 ORTHO05D008082 6.5e-13 77.0 52 67.3
Nn1g08395 Nelumbo nucifera HOM05D002593 ORTHO05D008082 8.5e-13 76.6 62 58.1
Migut.K00221 Erythranthe guttata HOM05D002593 ORTHO05D008082 1.1e-12 76.3 53 66.0
Carub.0006s3556 Capsella rubella HOM05D002593 ORTHO05D008082 1.4e-12 75.9 65 56.9
Thhalv10028817m.g Eutrema salsugineum HOM05D002593 ORTHO05D008082 2.5e-12 75.1 65 58.5
Glyma.10G139600 Glycine max HOM05D002593 ORTHO05D008082 2.5e-12 75.1 60 56.7
Lalb_Chr02g0147271 Lupinus albus HOM05D002593 ORTHO05D008082 3.2e-12 74.7 60 60.0
Os01g0971700 Oryza sativa ssp. japonica HOM05D002593 ORTHO05D008082 3.2e-12 74.7 54 61.1
CAN.G179.25 Capsicum annuum HOM05D002593 ORTHO05D008082 5.5e-12 73.9 58 58.6
Cc01_g21690 Coffea canephora HOM05D002593 ORTHO05D008082 5.5e-12 73.9 62 56.5
ECA247G2130 Erigeron canadensis HOM05D005434 ORTHO05D008082 5.5e-12 73.9 61 54.1
AL6G51700 Arabidopsis lyrata HOM05D002593 ORTHO05D008082 7.2e-12 73.6 50 68.0
BcaB01g02125 Brassica carinata HOM05D002593 ORTHO05D008082 7.2e-12 73.6 50 66.0
Lj5g0028161 Lotus japonicus HOM05D002593 ORTHO05D008082 7.2e-12 73.6 60 58.3
arahy.Tifrunner.gnm1.ann1.BAG6CY Arachis hypogaea HOM05D002593 ORTHO05D008082 9.4e-12 73.2 64 48.4
arahy.Tifrunner.gnm1.ann1.EK7H7E Arachis hypogaea HOM05D002593 ORTHO05D008082 9.4e-12 73.2 64 48.4
BcaB01g02375 Brassica carinata HOM05D002593 ORTHO05D008082 9.4e-12 73.2 50 68.0
Oeu052791.1 Olea europaea HOM05D002593 ORTHO05D008082 9.4e-12 73.2 61 60.7
PGR142G0326 Punica granatum HOM05D002593 ORTHO05D008082 9.4e-12 73.2 56 60.7
Aqoxy2G02408 Aquilegia oxysepala HOM05D002593 ORTHO05D008082 1.2e-11 72.8 49 67.3
BcaC01g06808 Brassica carinata HOM05D002593 ORTHO05D008082 1.2e-11 72.8 50 68.0
BcaC04g24081 Brassica carinata HOM05D002593 ORTHO05D008082 1.2e-11 72.8 50 66.0
A03p31530 Brassica napus HOM05D002593 ORTHO05D008082 1.2e-11 72.8 50 68.0
C03p38510 Brassica napus HOM05D002593 ORTHO05D008082 1.2e-11 72.8 50 68.0
C09p01260 Brassica napus HOM05D002593 ORTHO05D008082 1.2e-11 72.8 50 66.0
BolC3t16125H Brassica oleracea HOM05D002593 ORTHO05D008082 1.2e-11 72.8 50 68.0
BolC9t53060H Brassica oleracea HOM05D002593 ORTHO05D008082 1.2e-11 72.8 50 66.0
BraA03t12332Z Brassica rapa HOM05D002593 ORTHO05D008082 1.2e-11 72.8 50 68.0
BraA09t35788Z Brassica rapa HOM05D002593 ORTHO05D008082 1.2e-11 72.8 50 66.0
Sp6g01540 Schrenkiella parvula HOM05D002593 ORTHO05D008082 1.2e-11 72.8 50 68.0
AT4G01650 Arabidopsis thaliana HOM05D002593 ORTHO05D008082 1.6e-11 72.4 50 66.0
A09p01180 Brassica napus HOM05D002593 ORTHO05D008082 1.6e-11 72.4 47 70.2
CARHR250020 Cardamine hirsuta HOM05D002593 ORTHO05D008082 1.6e-11 72.4 50 66.0
MELO3C021224.2 Cucumis melo HOM05D002593 ORTHO05D008082 1.6e-11 72.4 60 58.3
Sopen01g030550 Solanum pennellii HOM05D002593 ORTHO05D008082 1.6e-11 72.4 68 52.9
Ca_10229_v3 Cicer arietinum L. HOM05D002593 ORTHO05D008082 2.1e-11 72.0 45 75.6
Medtr1g085550 Medicago truncatula HOM05D002593 ORTHO05D008082 2.1e-11 72.0 59 57.6
PSO210G3595 Papaver somniferum HOM05D002593 ORTHO05D008082 2.1e-11 72.0 58 63.8
Phvul.007G207900 Phaseolus vulgaris HOM05D002593 ORTHO05D008082 2.1e-11 72.0 59 55.9
THA.LOC104815911 Tarenaya hassleriana HOM05D002593 ORTHO05D008082 2.1e-11 72.0 55 63.6
MSTRG.26210 Avicennia marina HOM05D002593 ORTHO05D008082 2.7e-11 71.6 54 59.3
FvH4_1g26070 Fragaria vesca HOM05D002593 ORTHO05D008082 2.7e-11 71.6 63 61.9
FAN19G0602 Fragaria x ananassa HOM05D002593 ORTHO05D008082 2.7e-11 71.6 63 61.9
PGSC0003DMG400000842 Solanum tuberosum HOM05D002593 ORTHO05D008082 2.7e-11 71.6 58 58.6
TWI14G0813 Tripterygium wilfordii HOM05D002593 ORTHO05D008082 3.6e-11 71.2 62 56.5
MD09G1291800 Malus domestica HOM05D002593 ORTHO05D008082 4.6e-11 70.9 42 76.2
TPR.G3014 Trifolium pratense HOM05D002593 ORTHO05D008082 6.1e-11 70.5 59 57.6
Lsat_1_v5_gn_9_7181 Lactuca sativa HOM05D002593 ORTHO05D008082 7.9e-11 70.1 60 58.3
Solyc01g068620.4 Solanum lycopersicum HOM05D002593 ORTHO05D008082 1.0e-10 69.7 58 56.9
CsaV3_6G000300 Cucumis sativus L. HOM05D002593 ORTHO05D008082 1.4e-10 69.3 56 58.9
HanXRQChr10g0286511 Helianthus annuus HOM05D002593 ORTHO05D008082 1.4e-10 69.3 53 60.4
MBI18_g28920_MAGBIO Magnolia biondii HOM05D002593 ORTHO05D008082 1.4e-10 69.3 63 54.0
Peaxi162Scf00309g00511 Petunia axillaris HOM05D002593 ORTHO05D008082 1.4e-10 69.3 68 50.0
FAN23G1996 Fragaria x ananassa HOM05D002593 ORTHO05D008082 1.8e-10 68.9 54 66.7
FAN23G3081 Fragaria x ananassa HOM05D002593 ORTHO05D008082 1.8e-10 68.9 54 66.7
Sc17g0000080 Simmondsia chinensis HOM05D002593 ORTHO05D008082 1.8e-10 68.9 61 52.5
THA.LOC104801332 Tarenaya hassleriana HOM05D002593 ORTHO05D008082 1.8e-10 68.9 63 57.1
SGA_v2.0_scaffold12G06079 Striga asiatica HOM05D002593 ORTHO05D008082 2.3e-10 68.6 42 71.4
FAN26G3134 Fragaria x ananassa HOM05D002593 ORTHO05D008082 3.0e-10 68.2 54 64.8
RcHm_v2.0_Chr3g0485541 Rosa chinensis HOM05D002593 ORTHO05D008082 3.0e-10 68.2 42 78.6
ClCG06G004130 Citrullus lanatus HOM05D002593 ORTHO05D008082 3.9e-10 67.8 51 66.7
Mapoly0125s0022 Marchantia polymorpha HOM05D002593 ORTHO05D008082 3.9e-10 67.8 45 64.4
unitig_0.g2672 Utricularia gibba HOM05D002593 ORTHO05D008082 5.1e-10 67.4 54 53.7
VMungo0720G0036 Vigna mungo HOM05D002593 ORTHO05D008082 5.1e-10 67.4 58 53.4
HPP92_021910 Vanilla planifolia HOM05D002593 ORTHO05D008082 6.7e-10 67.0 58 53.4
unitig_748.g7215 Utricularia gibba HOM05D002593 ORTHO05D008082 8.8e-10 66.6 54 55.6
FAN28G0491 Fragaria x ananassa HOM05D002593 ORTHO05D008082 2.0e-09 65.5 42 76.2
PSO761G0232 Papaver somniferum HOM05D002593 ORTHO05D008082 2.0e-09 65.5 44 70.5
Sed0017127 Sechium edule HOM05D002593 ORTHO05D008082 3.3e-09 64.7 65 50.8
Hund08525 Selenicereus undatus HOM05D002593 ORTHO05D008082 5.7e-09 63.9 52 57.7
Hund15465 Selenicereus undatus HOM05D002593 ORTHO05D008082 5.7e-09 63.9 52 55.8
CDE11G0220 Ceratophyllum demersum HOM05D002593 ORTHO05D008082 9.7e-09 63.2 48 64.6
Atru.chr5.836 Acer truncatum HOM05D002593 ORTHO05D008082 1.7e-08 62.4 62 48.4
Aa31sc2117G10 Aethionema arabicum HOM05D002593 ORTHO05D008082 2.2e-08 62.0 49 55.1
CDE05G1031 Ceratophyllum demersum HOM05D002593 ORTHO05D008082 2.8e-08 61.6 54 55.6
THA.LOC104801335 Tarenaya hassleriana HOM05D002593 ORTHO05D008082 8.2e-08 60.1 62 46.8
Aa31LG5G1360 Aethionema arabicum HOM05D002593 ORTHO05D008082 3.1e-07 58.2 49 51.0
ATR0796G107 Amborella trichopoda HOM05D002593 ORTHO05D008082 3.1e-07 58.2 52 59.6
AagrBONN_evm.TU.Sc2ySwM_344.978 Anthoceros agrestis HOM05D002593 ORTHO05D008082 4.1e-07 57.8 39 64.1
SMO339G0046 Selaginella moellendorffii HOM05D002593 ORTHO05D008082 9.1e-07 56.6 44 47.7


User provided reference genes

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