Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 1.3e-207 726.1 347 100.0
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 1.1e-134 483.8 305 77.0
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 1.4e-105 387.1 238 74.8
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 5.4e-105 385.2 230 78.7
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 1.2e-104 384.0 249 71.5
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 1.0e-103 380.9 241 75.1
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 8.6e-103 377.9 255 70.2
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 2.3e-100 369.8 255 67.1
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 1.2e-99 367.5 248 67.3
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 2.0e-99 366.7 245 69.0
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 1.7e-98 363.6 257 66.1
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 1.4e-97 360.5 253 66.0
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 1.8e-97 360.1 252 66.3
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 4.1e-97 359.0 244 68.4
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 1.2e-96 357.5 233 68.7
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 5.9e-96 355.1 233 70.0
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 5.9e-96 355.1 238 68.1
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 1.0e-95 354.4 254 66.1
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 1.3e-95 354.0 240 67.9
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 1.7e-95 353.6 252 66.7
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 3.9e-95 352.4 244 66.0
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 6.6e-95 351.7 244 65.2
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 1.1e-94 350.9 239 65.7
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 1.5e-94 350.5 244 66.8
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 2.5e-94 349.7 256 62.5
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 2.5e-94 349.7 265 63.8
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 3.3e-94 349.4 244 66.4
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 3.3e-94 349.4 248 64.9
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 4.3e-94 349.0 306 59.5
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 9.5e-94 347.8 306 59.2
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 1.2e-93 347.4 234 65.8
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 1.6e-93 347.1 248 64.5
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 1.6e-93 347.1 293 59.0
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 2.1e-93 346.7 308 60.4
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 6.1e-93 345.1 244 64.3
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 4.0e-92 342.4 264 61.7
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 1.5e-91 340.5 240 62.9
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 3.4e-91 339.3 236 65.3
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 5.8e-91 338.6 337 52.5
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 7.5e-91 338.2 230 67.4
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 1.3e-90 337.4 264 60.6
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 1.7e-90 337.0 264 61.7
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 2.2e-90 336.7 264 61.7
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 2.9e-90 336.3 240 62.5
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 6.4e-90 335.1 278 59.0
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 8.3e-90 334.7 252 61.1
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 1.1e-89 334.3 270 60.7
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 1.1e-89 334.3 270 60.7
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 1.1e-89 334.3 248 62.9
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 1.1e-89 334.3 230 65.2
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 1.9e-89 333.6 228 65.4
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 3.2e-89 332.8 267 61.0
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 3.2e-89 332.8 266 61.7
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 9.2e-89 331.3 231 64.5
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 3.5e-88 329.3 277 58.8
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 1.7e-87 327.0 266 60.9
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 1.7e-87 327.0 259 58.3
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 2.3e-87 326.6 243 63.8
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 3.3e-86 322.8 248 62.9
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 3.3e-86 322.8 234 61.5
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 2.8e-85 319.7 234 59.4
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 6.2e-85 318.5 211 70.1
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 1.4e-84 317.4 271 54.6
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 1.8e-84 317.0 302 56.3
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 3.1e-84 316.2 288 54.2
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 6.8e-84 315.1 249 60.6
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 9.8e-83 311.2 269 59.5
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 7.1e-81 305.1 288 55.9
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 9.2e-81 304.7 286 51.7
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 1.2e-80 304.3 229 61.6
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 3.5e-80 302.8 217 62.7
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 1.0e-79 301.2 226 62.4
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 3.9e-79 299.3 330 48.2
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 1.2e-75 287.7 244 57.8
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 7.6e-75 285.0 235 56.6
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 7.3e-70 268.5 309 47.6
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 6.2e-69 265.4 248 53.6
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 1.2e-67 261.2 234 53.8
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 1.4e-65 254.2 188 61.2
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 7.1e-65 251.9 249 51.0
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 1.2e-64 251.1 216 56.0
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 3.5e-64 249.6 259 51.0
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 1.1e-62 244.6 236 53.0
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 4.3e-54 216.1 233 43.8
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 8.1e-53 211.8 250 45.2
Psat7g263560 Pisum sativum HOM05D007092 ORTHO05D008947 1.3e-50 204.5 146 63.0
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 2.9e-50 203.4 225 44.4
FAN09G2007 Fragaria x ananassa HOM05D007092 ORTHO05D008947 5.6e-46 189.1 187 54.0
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 6.2e-45 185.7 110 73.6
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 2.6e-43 180.3 233 40.3
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 1.9e-41 174.1 166 49.4
RcHm_v2.0_Chr1g0381181 Rosa chinensis HOM05D007092 ORTHO05D008947 2.1e-32 144.1 142 54.9
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 3.3e-30 136.7 91 65.9
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 1.6e-29 134.4 90 67.8
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 9.0e-28 128.6 266 31.6
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 7.4e-22 109.0 66 69.7
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 2.2e-21 107.5 88 55.7
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 3.7e-21 106.7 66 65.2
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 3.7e-21 106.7 67 67.2
Cpa.g.sc1009.2 Carica papaya HOM05D007092 ORTHO05D008947 1.3e-18 98.2 66 68.2
arahy.Tifrunner.gnm1.ann1.QYJ7WZ Arachis hypogaea HOM05D007092 ORTHO05D008947 1.0e-15 88.6 67 62.7
arahy.Tifrunner.gnm1.ann1.TPQB3Q Arachis hypogaea HOM05D007092 ORTHO05D008947 1.0e-15 88.6 67 62.7
arahy.Tifrunner.gnm1.ann1.KBSP04 Arachis hypogaea HOM05D002221 ORTHO05D002626 5.9e-11 72.8 58 58.6
arahy.Tifrunner.gnm1.ann1.R6H1XR Arachis hypogaea HOM05D002221 ORTHO05D002626 5.9e-11 72.8 58 58.6
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 1.7e-10 71.2 58 56.9
Actinidia38794 Actinidia chinensis HOM05D007092 ORTHO05D008947 2.2e-10 70.9 54 59.3
BcaB05g22026 Brassica carinata HOM05D007092 ORTHO05D008947 3.2e-09 67.0 62 48.4
Hund18614 Selenicereus undatus HOM05D007092 ORTHO05D008947 2.1e-08 64.3 120 40.0
SEGI_38624 Sequoiadendron giganteum HOM05D007092 ORTHO05D050975 2.7e-08 63.9 46 56.5
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 3.6e-08 63.5 36 72.2
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 3.6e-08 63.5 36 72.2
Cpa.g.sc3948.1 Carica papaya HOM05D007092 ORTHO05D008947 4.0e-07 60.1 32 78.1
arahy.Tifrunner.gnm1.ann1.AT2CXE Arachis hypogaea HOM05D007092 ORTHO05D008947 6.7e-07 59.3 43 55.8
SEGI_02665 Sequoiadendron giganteum HOM05D007092 ORTHO05D050975 3.3e-06 57.0 66 43.9
Cre06.g248750 Chlamydomonas reinhardtii HOM05D060812 ORTHO05D008947 4.4e-06 56.6 67 41.8
BcaB04g17422 Brassica carinata HOM05D007092 ORTHO05D008947 7.5e-06 55.8 48 54.2
Actinidia21637 Actinidia chinensis HOM05D007092 ORTHO05D008947 9.7e-06 55.5 79 38.0


User provided reference genes

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