Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_22568 Corchorus olitorius HOM05D007735 ORTHO05D009638 9.9e-68 260.0 132 100.0
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 9.4e-26 120.6 149 59.1
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 3.6e-17 92.0 139 51.1
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 3.0e-16 89.0 139 50.4
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 1.5e-15 86.7 139 48.9
Gohir.D04G020900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 9.7e-15 84.0 116 51.7
Gorai.012G025100 Gossypium raimondii HOM05D007735 ORTHO05D009638 1.3e-14 83.6 131 49.6
Gohir.A05G393900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 4.8e-14 81.6 130 50.0
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 2.4e-13 79.3 140 44.3
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 3.1e-13 79.0 135 43.0
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 5.3e-13 78.2 121 48.8
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 1.2e-12 77.0 136 41.9
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 1.6e-12 76.6 114 45.6
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 2.6e-12 75.9 123 45.5
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.6e-12 75.9 123 45.5
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 2.6e-12 75.9 137 43.1
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 4.5e-12 75.1 127 47.2
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 4.5e-12 75.1 127 47.2
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 5.9e-12 74.7 122 45.9
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 5.9e-12 74.7 123 44.7
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 7.7e-12 74.3 138 46.4
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 7.7e-12 74.3 131 43.5
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 1.3e-11 73.6 136 42.6
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 1.7e-11 73.2 135 44.4
Cpa.g.sc6.350 Carica papaya HOM05D007735 ORTHO05D009638 2.2e-11 72.8 126 45.2
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 2.2e-11 72.8 115 44.3
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 2.9e-11 72.4 124 45.2
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 3.8e-11 72.0 119 43.7
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 3.8e-11 72.0 123 43.9
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 5.0e-11 71.6 134 44.0
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 6.5e-11 71.2 115 44.3
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 8.5e-11 70.9 124 42.7
Sabra11G0130300 Salix brachista HOM05D007735 ORTHO05D009638 8.5e-11 70.9 127 49.6
Medtr8g072610 Medicago truncatula HOM05D007735 ORTHO05D009638 1.1e-10 70.5 125 44.0
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 1.5e-10 70.1 123 44.7
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 1.9e-10 69.7 143 42.7
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 1.9e-10 69.7 135 40.0
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 3.2e-10 68.9 114 43.9
CiPaw.07G000500 Carya illinoinensis HOM05D007735 ORTHO05D009638 4.2e-10 68.6 109 42.2
Lalb_Chr09g0324871 Lupinus albus HOM05D007735 ORTHO05D009638 7.2e-10 67.8 138 41.3
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 9.4e-10 67.4 131 41.2
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 9.4e-10 67.4 137 41.6
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 1.2e-09 67.0 135 42.2
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.2e-09 67.0 111 41.4
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 1.6e-09 66.6 130 41.5
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 2.1e-09 66.2 111 39.6
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 2.1e-09 66.2 135 38.5
PGSC0003DMG400018690 Solanum tuberosum HOM05D007735 ORTHO05D009638 2.1e-09 66.2 122 38.5
TPR.G33757 Trifolium pratense HOM05D001957 ORTHO05D002015 3.6e-09 65.5 121 42.1
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 6.1e-09 64.7 117 43.6
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 6.1e-09 64.7 111 39.6
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 1.0e-08 63.9 125 42.4
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 1.4e-08 63.5 129 41.9
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.4e-08 63.5 128 40.6
LjContig00247g0020335 Lotus japonicus HOM05D007735 ORTHO05D009638 3.0e-08 62.4 139 42.4
Psat4g107200 Pisum sativum HOM05D007735 ORTHO05D009638 3.0e-08 62.4 131 39.7
Oeu045753.2 Olea europaea HOM05D007735 ORTHO05D009638 4.0e-08 62.0 132 38.6
Ca_25020_v3 Cicer arietinum L. HOM05D007735 ORTHO05D009638 8.8e-08 60.8 139 38.1
Eucgr.J02566 Eucalyptus grandis HOM05D007735 ORTHO05D009638 8.8e-08 60.8 131 42.0
Lj2g0017807 Lotus japonicus HOM05D007735 ORTHO05D009638 8.8e-08 60.8 135 38.5
Medtr5g024910 Medicago truncatula HOM05D007735 ORTHO05D009638 8.8e-08 60.8 139 38.8
Psat2g147360 Pisum sativum HOM05D007735 ORTHO05D009638 8.8e-08 60.8 121 38.8
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 1.2e-07 60.5 108 44.4
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.2e-07 60.5 129 41.1
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 2.0e-07 59.7 134 38.1
FAN23G2983 Fragaria x ananassa HOM05D007735 ORTHO05D009638 3.3e-07 58.9 111 40.5
Sed0019252 Sechium edule HOM05D007735 ORTHO05D009638 4.4e-07 58.5 131 38.9
FAN26G0974 Fragaria x ananassa HOM05D007735 ORTHO05D009638 5.7e-07 58.2 111 40.5
SGA_v2.0_scaffold108G30951 Striga asiatica HOM05D007735 ORTHO05D009638 1.3e-06 57.0 131 38.2
CsaV3_3G000130 Cucumis sativus L. HOM05D007735 ORTHO05D009638 1.7e-06 56.6 129 38.8
CsaV3_UNG155170 Cucumis sativus L. HOM05D007735 ORTHO05D009638 1.7e-06 56.6 129 38.8
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 2.8e-06 55.8 135 37.0
ClCG10G000110 Citrullus lanatus HOM05D007735 ORTHO05D009638 2.8e-06 55.8 110 42.7
MELO3C013706.2 Cucumis melo HOM05D007735 ORTHO05D009638 2.8e-06 55.8 129 39.5
Haze_22869 Corylus avellana HOM05D007735 ORTHO05D009638 3.7e-06 55.5 123 41.5
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 8.2e-06 54.3 134 36.6
Oeu043409.2 Olea europaea HOM05D007735 ORTHO05D009638 8.2e-06 54.3 129 36.4


User provided reference genes

Program Settings