Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_22055 Corchorus olitorius HOM05D005644 ORTHO05D007092 3.5e-25 117.5 59 100.0
Gohir.A02G166400 Gossypium hirsutum HOM05D005644 ORTHO05D007092 1.7e-19 98.6 50 98.0
Gohir.D03G013600 Gossypium hirsutum HOM05D005644 ORTHO05D007092 1.7e-19 98.6 50 98.0
Gorai.003G013900 Gossypium raimondii HOM05D005644 ORTHO05D007092 1.7e-19 98.6 50 98.0
Thecc.01G033400 Theobroma cacao HOM05D005644 ORTHO05D007092 1.7e-19 98.6 50 98.0
Manes.02G095200 Manihot esculenta HOM05D005644 ORTHO05D007092 1.9e-18 95.1 50 94.0
Potri.005G121700 Populus trichocarpa HOM05D005644 ORTHO05D007092 4.2e-18 94.0 50 90.0
TWI73G0320 Tripterygium wilfordii HOM05D005644 ORTHO05D007092 4.2e-18 94.0 50 92.0
Duzib264G1010 Durio zibethinus HOM05D005644 ORTHO05D007092 4.6e-17 90.5 50 90.0
Atru.chr7.2312 Acer truncatum HOM05D005644 ORTHO05D007092 6.1e-17 90.1 50 90.0
Potri.007G023500 Populus trichocarpa HOM05D005644 ORTHO05D007092 7.9e-17 89.7 50 88.0
Ciclev10022394m.g Citrus clementina HOM05D005644 ORTHO05D007092 1.0e-16 89.4 50 86.0
Prupe.7G156300 Prunus persica HOM05D005644 ORTHO05D007092 1.4e-16 89.0 50 88.0
CiPaw.02G018800 Carya illinoinensis HOM05D005644 ORTHO05D007092 2.3e-16 88.2 50 88.0
Sabra05G0100200 Salix brachista HOM05D005644 ORTHO05D007092 2.3e-16 88.2 50 86.0
Manes.01G136400 Manihot esculenta HOM05D005644 ORTHO05D007092 3.0e-16 87.8 50 88.0
QL06p046522 Quercus lobata HOM05D005644 ORTHO05D007092 3.0e-16 87.8 50 86.0
Cpa.g.sc6.131 Carica papaya HOM05D005644 ORTHO05D007092 3.9e-16 87.4 50 88.0
TAR101G0001 Trochodendron aralioides HOM05D005644 ORTHO05D007092 5.1e-16 87.0 50 84.0
Thhalv10022866m.g Eutrema salsugineum HOM05D005644 ORTHO05D007092 6.7e-16 86.7 50 86.0
THA.LOC104804235 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 1.1e-15 85.9 50 86.0
MELO3C026580.2 Cucumis melo HOM05D005644 ORTHO05D007092 1.9e-15 85.1 50 84.0
CsaV3_3G042790 Cucumis sativus L. HOM05D005644 ORTHO05D007092 1.9e-15 85.1 50 84.0
MD02G1145400 Malus domestica HOM05D005644 ORTHO05D007092 1.9e-15 85.1 50 82.0
Nn1g04949 Nelumbo nucifera HOM05D005644 ORTHO05D007092 1.9e-15 85.1 50 82.0
AT2G18290 Arabidopsis thaliana HOM05D005644 ORTHO05D007092 2.5e-15 84.7 50 82.0
A06p33310 Brassica napus HOM05D005644 ORTHO05D007092 2.5e-15 84.7 50 84.0
C03p59070 Brassica napus HOM05D005644 ORTHO05D007092 2.5e-15 84.7 50 84.0
BolC3t18168H Brassica oleracea HOM05D005644 ORTHO05D007092 2.5e-15 84.7 50 84.0
BraA06t26260Z Brassica rapa HOM05D005644 ORTHO05D007092 2.5e-15 84.7 50 84.0
CANSAT01G2444 Cannabis sativa HOM05D005644 ORTHO05D007092 2.5e-15 84.7 50 84.0
Medtr8g077200 Medicago truncatula HOM05D005644 ORTHO05D007092 2.5e-15 84.7 50 82.0
Sp3g31700 Schrenkiella parvula HOM05D005644 ORTHO05D007092 2.5e-15 84.7 50 84.0
TPR.G24098 Trifolium pratense HOM05D005644 ORTHO05D007092 2.5e-15 84.7 50 82.0
AL3G51550 Arabidopsis lyrata HOM05D005644 ORTHO05D007092 3.3e-15 84.3 50 82.0
Lalb_Chr09g0333481 Lupinus albus HOM05D005644 ORTHO05D007092 3.3e-15 84.3 50 82.0
THA.LOC104819776 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 3.3e-15 84.3 50 84.0
Ca_22319_v3 Cicer arietinum L. HOM05D005644 ORTHO05D007092 4.3e-15 84.0 50 82.0
ClCG10G013900 Citrullus lanatus HOM05D005644 ORTHO05D007092 4.3e-15 84.0 50 82.0
Eucgr.I02428 Eucalyptus grandis HOM05D005644 ORTHO05D007092 4.3e-15 84.0 50 84.0
Sed0008907 Sechium edule HOM05D005644 ORTHO05D007092 4.3e-15 84.0 50 82.0
GSVIVG01018941001 Vitis vinifera HOM05D005644 ORTHO05D007092 4.3e-15 84.0 47 83.0
arahy.Tifrunner.gnm1.ann1.59MT2Q Arachis hypogaea HOM05D005644 ORTHO05D007092 5.7e-15 83.6 50 82.0
Psat4g094240 Pisum sativum HOM05D005644 ORTHO05D007092 5.7e-15 83.6 50 82.0
Aa31LG8G15730 Aethionema arabicum HOM05D005644 ORTHO05D007092 7.4e-15 83.2 50 82.0
Dinv39995 Davidia involucrata HOM05D005644 ORTHO05D007092 1.7e-14 82.0 47 85.1
PSO675G1163 Papaver somniferum HOM05D005644 ORTHO05D007092 1.7e-14 82.0 50 80.0
PGR031G1764 Punica granatum HOM05D005644 ORTHO05D007092 1.7e-14 82.0 50 82.0
PSO541G0643 Papaver somniferum HOM05D005644 ORTHO05D007092 2.2e-14 81.6 50 80.0
BcaB08g34803 Brassica carinata HOM05D005644 ORTHO05D007092 2.8e-14 81.3 50 80.0
Carub.0003s3246 Capsella rubella HOM05D005644 ORTHO05D007092 2.8e-14 81.3 50 80.0
Glyma.16G138200 Glycine max HOM05D005644 ORTHO05D007092 2.8e-14 81.3 50 82.0
Oeu050374.1 Olea europaea HOM05D005644 ORTHO05D007092 3.7e-14 80.9 47 83.0
arahy.Tifrunner.gnm1.ann1.SR5TCU Arachis hypogaea HOM05D005644 ORTHO05D007092 6.3e-14 80.1 47 83.0
Peaxi162Scf00008g03525 Petunia axillaris HOM05D005644 ORTHO05D007092 6.3e-14 80.1 55 70.9
Phvul.003G254800 Phaseolus vulgaris HOM05D005644 ORTHO05D007092 6.3e-14 80.1 50 80.0
RcHm_v2.0_Chr2g0101251 Rosa chinensis HOM05D005644 ORTHO05D007092 6.3e-14 80.1 50 84.0
VMungo0251G3244 Vigna mungo HOM05D005644 ORTHO05D007092 1.1e-13 79.3 50 80.0
vmacro17823 Vaccinium macrocarpon HOM05D005644 ORTHO05D007092 1.4e-13 79.0 51 78.4
Rhsim11G0151400 Rhododendron simsii HOM05D005644 ORTHO05D007092 1.8e-13 78.6 51 78.4
SalBow5G1882 Salvia bowleyana HOM05D005644 ORTHO05D007092 1.8e-13 78.6 47 78.7
MSTRG.3592 Avicennia marina HOM05D005644 ORTHO05D007092 2.4e-13 78.2 47 78.7
Lsat_1_v5_gn_4_151201 Lactuca sativa HOM05D005644 ORTHO05D007092 2.4e-13 78.2 50 78.0
Lj2A454T58 Lonicera japonica HOM05D005644 ORTHO05D007092 3.1e-13 77.8 50 78.0
Hund21503 Selenicereus undatus HOM05D005644 ORTHO05D007092 4.1e-13 77.4 50 74.0
Oeu002799.2 Olea europaea HOM05D005644 ORTHO05D007092 6.9e-13 76.6 47 76.6
Cc07_g09670 Coffea canephora HOM05D005644 ORTHO05D007092 1.2e-12 75.9 47 78.7
HanXRQChr09g0261331 Helianthus annuus HOM05D005644 ORTHO05D007092 1.2e-12 75.9 50 76.0
Nitab4.5_0000136g0330 Nicotiana tabacum HOM05D005644 ORTHO05D007092 1.2e-12 75.9 47 78.7
Nitab4.5_0005482g0020 Nicotiana tabacum HOM05D005644 ORTHO05D007092 1.2e-12 75.9 47 78.7
Solyc02g062680.3 Solanum lycopersicum HOM05D005644 ORTHO05D007092 1.2e-12 75.9 47 78.7
Sopen02g013700 Solanum pennellii HOM05D005644 ORTHO05D007092 1.2e-12 75.9 47 78.7
PGR083G1765 Punica granatum HOM05D005644 ORTHO05D007092 1.5e-12 75.5 50 78.0
Aqoxy6G01133 Aquilegia oxysepala HOM05D005644 ORTHO05D007092 2.0e-12 75.1 50 74.0
FvH4_1g13080 Fragaria vesca HOM05D005644 ORTHO05D007092 2.6e-12 74.7 47 83.0
FAN23G1669 Fragaria x ananassa HOM05D005644 ORTHO05D007092 2.6e-12 74.7 47 83.0
FAN26G0781 Fragaria x ananassa HOM05D000577 ORTHO05D003509 2.6e-12 74.7 47 83.0
Glyma.02G055400 Glycine max HOM05D005644 ORTHO05D007092 2.6e-12 74.7 50 76.0
Migut.L00368 Erythranthe guttata HOM05D005644 ORTHO05D007092 4.5e-12 73.9 47 72.3
Migut.L00376 Erythranthe guttata HOM05D005644 ORTHO05D007092 4.5e-12 73.9 47 72.3
Lj4g0022669 Lotus japonicus HOM05D005644 ORTHO05D007092 4.5e-12 73.9 51 74.5
MBI02_g12270_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 4.5e-12 73.9 48 77.1
Sc16g0002690 Simmondsia chinensis HOM05D005644 ORTHO05D007092 4.5e-12 73.9 50 72.0
FAN19G1519 Fragaria x ananassa HOM05D005644 ORTHO05D007092 5.9e-12 73.6 47 80.9
PGSC0003DMG400015483 Solanum tuberosum HOM05D005644 ORTHO05D007092 5.9e-12 73.6 47 76.6
unitig_37.g12363 Utricularia gibba HOM05D005644 ORTHO05D007092 5.9e-12 73.6 47 76.6
FAN13G0528 Fragaria x ananassa HOM05D005644 ORTHO05D007092 7.7e-12 73.2 47 80.9
AUR62020530 Chenopodium quinoa HOM05D005644 ORTHO05D007092 1.0e-11 72.8 50 70.0
AUR62034193 Chenopodium quinoa HOM05D005644 ORTHO05D007092 1.0e-11 72.8 50 70.0
AUR62043224 Chenopodium quinoa HOM05D005644 ORTHO05D007092 1.0e-11 72.8 50 70.0
SGA_v2.0_scaffold44G16541 Striga asiatica HOM05D005644 ORTHO05D007092 1.0e-11 72.8 47 76.6
ECA232G0363 Erigeron canadensis HOM05D005644 ORTHO05D007092 1.3e-11 72.4 50 70.0
FAN28G2376 Fragaria x ananassa HOM05D005644 ORTHO05D003509 2.2e-11 71.6 50 76.0
EL10Ac4g07935 Beta vulgaris HOM05D005644 ORTHO05D007092 2.9e-11 71.2 50 70.0
FAN08G2945 Fragaria x ananassa HOM05D005644 ORTHO05D007092 3.8e-11 70.9 47 78.7
SGA_v2.0_scaffold2G01321 Striga asiatica HOM05D005644 ORTHO05D007092 3.8e-11 70.9 47 74.5
Hma1.2p1_0450F.1_g155660 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 5.0e-11 70.5 47 72.3
BolC7t40857H Brassica oleracea HOM05D005644 ORTHO05D007092 6.5e-11 70.1 46 76.1
FvH4_5g29620 Fragaria vesca HOM05D005644 ORTHO05D007092 1.4e-10 68.9 47 76.6
CAN.G53.17 Capsicum annuum HOM05D005644 ORTHO05D007092 2.5e-10 68.2 47 72.3
FAN18G2110 Fragaria x ananassa HOM05D005644 ORTHO05D007092 3.2e-10 67.8 47 74.5
Hma1.2p1_2451F.1_g322360 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 3.2e-10 67.8 47 72.3
MBI08_g40822_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 3.2e-10 67.8 48 70.8
Atru.chr3.600 Acer truncatum HOM05D005644 ORTHO05D007092 7.9e-09 63.2 47 70.2
MBI02_g17151_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 7.9e-09 63.2 50 66.0
MBI02_g42708_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 7.9e-09 63.2 50 66.0
ATR0594G186 Amborella trichopoda HOM05D005644 ORTHO05D007092 1.4e-08 62.4 50 70.0
Thecc.01G208400 Theobroma cacao HOM05D005644 ORTHO05D408548 1.8e-08 62.0 34 91.2
HPP92_023420 Vanilla planifolia HOM05D005644 ORTHO05D007092 3.9e-08 60.8 51 66.7
Dinv38404 Davidia involucrata HOM05D005644 ORTHO05D007092 5.1e-08 60.5 40 70.0
Ah.13g077660 Amaranthus hybridus HOM05D005644 ORTHO05D007092 1.5e-07 58.9 46 60.9
DCAR_025950 Daucus carota HOM05D005644 ORTHO05D007092 2.0e-07 58.5 40 72.5
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 4.8e-06 53.9 36 72.2


User provided reference genes

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