Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_21893 Corchorus olitorius HOM05D017627 ORTHO05D014603 6.8e-106 387.5 217 100.0
COL.COLO4_37972 Corchorus olitorius HOM05D017627 ORTHO05D014603 9.2e-71 270.8 142 96.5
COL.COLO4_36056 Corchorus olitorius HOM05D017627 ORTHO05D014603 2.0e-57 226.5 122 95.9
COL.COLO4_16101 Corchorus olitorius HOM05D017627 ORTHO05D014603 6.7e-37 158.3 105 78.1
COL.COLO4_22902 Corchorus olitorius HOM05D017627 ORTHO05D014603 1.1e-20 104.4 130 49.2
COL.COLO4_20300 Corchorus olitorius HOM05D025863 ORTHO05D014603 1.4e-18 97.4 145 35.9
COL.COLO4_03673 Corchorus olitorius HOM05D017627 ORTHO05D014603 5.3e-18 95.5 181 42.5
COL.COLO4_29648 Corchorus olitorius HOM05D000182 ORTHO05D000112 1.1e-15 87.8 136 39.0
COL.COLO4_35858 Corchorus olitorius HOM05D025863 ORTHO05D014603 9.4e-15 84.7 119 37.8
COL.COLO4_15690 Corchorus olitorius HOM05D025863 ORTHO05D014603 3.9e-13 79.3 146 34.9
COL.COLO4_20035 Corchorus olitorius HOM05D023342 ORTHO05D014603 3.9e-13 79.3 119 36.1
COL.COLO4_20253 Corchorus olitorius HOM05D023342 ORTHO05D014603 3.9e-13 79.3 119 36.1
EL10Ac7g17113 Beta vulgaris HOM05D000034 ORTHO05D000277 6.7e-13 78.6 200 30.5
COL.COLO4_37805 Corchorus olitorius HOM05D017627 ORTHO05D014603 1.5e-12 77.4 195 33.3
Ah.08g221600 Amaranthus hybridus HOM05D000034 ORTHO05D000277 9.7e-12 74.7 198 28.8
CSS0036595 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 6.3e-11 72.0 190 27.4
DCAR_018898 Daucus carota HOM05D001651 ORTHO05D000277 6.3e-11 72.0 193 28.5
DCAR_009785 Daucus carota HOM05D001651 ORTHO05D000277 8.2e-11 71.6 196 27.6
DCAR_015799 Daucus carota HOM05D001651 ORTHO05D000277 8.2e-11 71.6 196 27.6
Hma1.2p1_0127F.1_g059736 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.2e-11 71.6 218 26.6
Hma1.2p1_0286F.1_g113985 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.2e-11 71.6 218 26.6
Hma1.2p1_0890F.1_g233020 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.2e-11 71.6 196 24.0
EL10Ac1g00510 Beta vulgaris HOM05D000034 ORTHO05D000277 1.1e-10 71.2 200 29.0
COL.COLO4_11952 Corchorus olitorius HOM05D023342 ORTHO05D014603 1.1e-10 71.2 122 33.6
DCAR_011368 Daucus carota HOM05D001651 ORTHO05D000277 1.1e-10 71.2 193 28.5
DCAR_011369 Daucus carota HOM05D001651 ORTHO05D000277 1.1e-10 71.2 193 28.5
Hma1.2p1_0354F.1_g133450 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.1e-10 71.2 218 26.6
Hma1.2p1_0165F.1_g073390 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.8e-10 70.5 201 27.4
Hma1.2p1_0189F.1_g082820 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.9e-10 68.6 197 23.4
Hma1.2p1_0746F.1_g212360 Hydrangea macrophylla HOM05D000454 ORTHO05D000591 6.9e-10 68.6 198 27.8
Hma1.2p1_0846F.1_g227800 Hydrangea macrophylla HOM05D000454 ORTHO05D000591 6.9e-10 68.6 198 27.8
Hma1.2p1_0276F.1_g111440 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.1e-10 68.2 218 26.1
CSS0033072 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.5e-09 67.4 204 25.0
CSS0024362 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 2.0e-09 67.0 191 27.2
Hma1.2p1_0489F.1_g164000 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.0e-09 67.0 196 26.0
EL10Ac3g05873 Beta vulgaris HOM05D000034 ORTHO05D000277 2.6e-09 66.6 205 26.8
CSS0015669 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 2.6e-09 66.6 191 27.2
CSS0031455 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 2.6e-09 66.6 193 27.5
Hma1.2p1_1761F.1_g301340 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.6e-09 66.6 197 22.8
Hma1.2p1_0035F.1_g021910 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.5e-09 65.9 203 26.1
CSS0028844 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.9e-09 65.5 198 26.3
CANSAT64G1414 Cannabis sativa HOM05D001651 ORTHO05D000277 5.9e-09 65.5 189 24.3
RcHm_v2.0_Chr6g0274461 Rosa chinensis HOM05D000034 ORTHO05D000277 5.9e-09 65.5 196 25.0
RcHm_v2.0_Chr6g0284621 Rosa chinensis HOM05D000034 ORTHO05D000277 5.9e-09 65.5 196 25.0
Atru.chr4.1088 Acer truncatum HOM05D000034 ORTHO05D000037 7.7e-09 65.1 198 26.8
CSS0047009 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.7e-09 65.1 198 26.3
Atru.chr6.616 Acer truncatum HOM05D000034 ORTHO05D000037 1.0e-08 64.7 198 27.3
CSS0010302 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.0e-08 64.7 191 27.2
CSS0036649 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.0e-08 64.7 198 26.3
CANSAT80G1436 Cannabis sativa HOM05D001651 ORTHO05D000277 1.0e-08 64.7 192 25.5
Hma1.2p1_0081F.1_g042220 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.0e-08 64.7 197 25.9
Dinv16912 Davidia involucrata HOM05D012673 ORTHO05D000277 1.7e-08 63.9 203 25.6
Dinv38790 Davidia involucrata HOM05D000034 ORTHO05D000277 1.7e-08 63.9 203 27.6
Hma1.2p1_0026F.1_g016610 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.7e-08 63.9 193 23.3
Lj1g0022147 Lotus japonicus HOM05D000034 ORTHO05D000277 1.7e-08 63.9 198 27.8
Actinidia04327 Actinidia chinensis HOM05D000034 ORTHO05D000037 5.0e-08 62.4 197 26.9
Ah.08g223780 Amaranthus hybridus HOM05D000034 ORTHO05D000277 5.0e-08 62.4 198 26.8
CSS0016960 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 5.0e-08 62.4 192 27.1
Rhsim02G0110600 Rhododendron simsii HOM05D000034 ORTHO05D000277 5.0e-08 62.4 203 26.6
Atru.chr12.953 Acer truncatum HOM05D001651 ORTHO05D000277 1.4e-07 60.8 193 23.8
Thecc.05G132700 Theobroma cacao HOM05D001651 ORTHO05D000277 1.4e-07 60.8 203 33.0
Hma1.2p1_0672F.1_g201070 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.9e-07 60.5 192 28.1
SGA_v2.0_scaffold3G01632 Striga asiatica HOM05D009666 ORTHO05D000277 1.9e-07 60.5 195 24.1
Atru.chr2.3198 Acer truncatum HOM05D001651 ORTHO05D000277 3.2e-07 59.7 193 23.3
Atru.chr6.37 Acer truncatum HOM05D000034 ORTHO05D000037 3.2e-07 59.7 202 23.8
COL.COLO4_08764 Corchorus olitorius HOM05D023342 ORTHO05D014603 4.2e-07 59.3 98 33.7
Actinidia26110 Actinidia chinensis HOM05D000034 ORTHO05D000277 5.5e-07 58.9 192 26.0
Actinidia35710 Actinidia chinensis HOM05D000034 ORTHO05D000277 5.5e-07 58.9 188 25.5
FAN26G1288 Fragaria x ananassa HOM05D000034 ORTHO05D000277 5.5e-07 58.9 198 26.3
GSVIVG01022336001 Vitis vinifera HOM05D000034 ORTHO05D000277 5.5e-07 58.9 195 25.1
CSS0008044 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 7.2e-07 58.5 190 26.3
CANSAT56G0820 Cannabis sativa HOM05D001651 ORTHO05D000277 7.2e-07 58.5 207 28.0
Dinv19761 Davidia involucrata HOM05D000034 ORTHO05D000277 1.2e-06 57.8 195 25.6
Dinv36440 Davidia involucrata HOM05D012673 ORTHO05D000277 1.2e-06 57.8 207 24.2
HanXRQChr01g0013481 Helianthus annuus HOM05D000034 ORTHO05D000277 1.2e-06 57.8 198 25.3
Rhsim01G0279200 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.6e-06 57.4 195 25.6
CSS0042392 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 2.1e-06 57.0 186 26.3
Dinv07787 Davidia involucrata HOM05D000034 ORTHO05D000277 2.1e-06 57.0 191 26.2
FAN22G0450 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.1e-06 57.0 197 26.4
Hma1.2p1_0170F.1_g074960 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 2.1e-06 57.0 202 23.3
RcHm_v2.0_Chr1g0343671 Rosa chinensis HOM05D000034 ORTHO05D000277 2.1e-06 57.0 197 24.9
COL.COLO4_07669 Corchorus olitorius HOM05D000034 ORTHO05D000277 2.7e-06 56.6 212 28.3
FAN02G0050 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.7e-06 56.6 198 25.8
QL01p014514 Quercus lobata HOM05D000034 ORTHO05D000277 2.7e-06 56.6 192 25.0
Actinidia06690 Actinidia chinensis HOM05D000034 ORTHO05D000277 3.6e-06 56.2 198 26.8
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 3.6e-06 56.2 192 25.5
FvH4_6g08194 Fragaria vesca HOM05D000034 ORTHO05D029418 3.6e-06 56.2 197 25.9
FAN28G1917 Fragaria x ananassa HOM05D000034 ORTHO05D000277 3.6e-06 56.2 197 25.9
Rhsim10G0097900 Rhododendron simsii HOM05D000034 ORTHO05D000277 4.7e-06 55.8 203 25.6
vmacro06986 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 4.7e-06 55.8 194 25.3
FAN25G0710 Fragaria x ananassa HOM05D000034 ORTHO05D000277 6.1e-06 55.5 197 25.9
HanXRQChr10g0300111 Helianthus annuus HOM05D000034 ORTHO05D000277 6.1e-06 55.5 198 24.7
Hma1.2p1_2373F.1_g320860 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.1e-06 55.5 192 27.1
SGA_v2.0_scaffold235G43663 Striga asiatica HOM05D009666 ORTHO05D000277 6.1e-06 55.5 191 26.2
FAN10G0151 Fragaria x ananassa HOM05D000034 ORTHO05D000277 7.9e-06 55.1 198 25.3
Hma1.2p1_0529F.1_g173280 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.9e-06 55.1 202 23.3


User provided reference genes

Program Settings