Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_21325 Corchorus olitorius HOM05D007826 ORTHO05D009921 2.0e-95 352.4 177 100.0
Thecc.10G138900 Theobroma cacao HOM05D007826 ORTHO05D009921 1.7e-67 259.6 151 86.1
Duzib114G0936 Durio zibethinus HOM05D007826 ORTHO05D009921 3.0e-67 258.8 151 84.8
Haze_02971 Corylus avellana HOM05D007826 ORTHO05D009921 3.7e-62 241.9 151 79.5
Gohir.D06G184100 Gossypium hirsutum HOM05D007826 ORTHO05D009921 7.1e-61 237.7 151 79.5
Gohir.A06G174000 Gossypium hirsutum HOM05D007826 ORTHO05D009921 9.2e-61 237.3 151 78.8
QL04p021763 Quercus lobata HOM05D007826 ORTHO05D009921 1.2e-60 236.9 151 75.5
Cfa010966 Carpinus fangiana HOM05D007826 ORTHO05D009921 1.6e-60 236.5 151 77.5
Gorai.010G215500 Gossypium raimondii HOM05D007826 ORTHO05D009921 6.0e-60 234.6 151 78.8
Ciclev10000762m.g Citrus clementina HOM05D007826 ORTHO05D009921 2.3e-59 232.6 151 73.5
Dinv02119 Davidia involucrata HOM05D007826 ORTHO05D009921 3.0e-59 232.3 151 74.2
CiPaw.14G010600 Carya illinoinensis HOM05D007826 ORTHO05D009921 1.9e-58 229.6 147 73.5
Atru.chr12.1205 Acer truncatum HOM05D007826 ORTHO05D009921 4.3e-58 228.4 151 73.5
CSS0030848 Camellia sinensis var. sinensis HOM05D007826 ORTHO05D009921 4.3e-58 228.4 151 72.8
Cpa.g.sc228.7 Carica papaya HOM05D007826 ORTHO05D009921 4.3e-58 228.4 151 75.5
GSVIVG01036583001 Vitis vinifera HOM05D007826 ORTHO05D009921 4.3e-58 228.4 151 73.5
TAR636G3365 Trochodendron aralioides HOM05D007826 ORTHO05D009921 1.2e-57 226.9 154 70.8
CiPaw.13G016900 Carya illinoinensis HOM05D007826 ORTHO05D009921 1.4e-56 223.4 174 63.8
Hma1.2p1_0233F.1_g098320 Hydrangea macrophylla HOM05D007826 ORTHO05D009921 3.1e-56 222.2 151 69.5
Potri.001G032800 Populus trichocarpa HOM05D007826 ORTHO05D009921 3.1e-56 222.2 154 72.1
Sabra01G0023300 Salix brachista HOM05D007826 ORTHO05D009921 3.1e-56 222.2 173 66.5
Prupe.2G045900 Prunus persica HOM05D007826 ORTHO05D009921 9.9e-55 217.2 154 68.8
Manes.04G155500 Manihot esculenta HOM05D007826 ORTHO05D009921 1.7e-54 216.5 154 70.1
vmacro13796 Vaccinium macrocarpon HOM05D007826 ORTHO05D009921 1.7e-54 216.5 151 69.5
RcHm_v2.0_Chr1g0328201 Rosa chinensis HOM05D007826 ORTHO05D009921 6.4e-54 214.5 154 67.5
Sc11g0006210 Simmondsia chinensis HOM05D007826 ORTHO05D009921 1.1e-53 213.8 151 66.2
MBI13_g00897_MAGBIO Magnolia biondii HOM05D007826 ORTHO05D009921 4.6e-52 208.4 151 66.9
Manes.11G008600 Manihot esculenta HOM05D007826 ORTHO05D009921 1.7e-51 206.5 154 64.9
Potri.003G192300 Populus trichocarpa HOM05D007826 ORTHO05D009921 1.7e-51 206.5 154 66.2
CSS0043932 Camellia sinensis var. sinensis HOM05D007826 ORTHO05D009921 3.9e-51 205.3 139 72.7
arahy.Tifrunner.gnm1.ann1.B3NFFH Arachis hypogaea HOM05D007826 ORTHO05D009921 1.5e-50 203.4 151 65.6
Hund15767 Selenicereus undatus HOM05D007826 ORTHO05D009921 7.3e-50 201.1 151 62.3
AUR62031690 Chenopodium quinoa HOM05D007826 ORTHO05D009921 2.1e-49 199.5 151 61.6
AUR62032571 Chenopodium quinoa HOM05D007826 ORTHO05D009921 2.1e-49 199.5 151 61.6
MD02G1275100 Malus domestica HOM05D007826 ORTHO05D009921 2.1e-49 199.5 154 66.2
Sabra03G0143200 Salix brachista HOM05D007826 ORTHO05D009921 2.1e-49 199.5 174 59.8
arahy.Tifrunner.gnm1.ann1.46TCXF Arachis hypogaea HOM05D007826 ORTHO05D009921 6.2e-49 198.0 171 57.9
Nn7g36978 Nelumbo nucifera HOM05D007826 ORTHO05D009921 6.2e-49 198.0 151 62.9
TWI38G1292 Tripterygium wilfordii HOM05D007826 ORTHO05D009921 1.1e-48 197.2 151 67.5
CsaV3_5G029550 Cucumis sativus L. HOM05D007826 ORTHO05D009921 1.4e-48 196.8 151 65.6
MELO3C011799.2 Cucumis melo HOM05D007826 ORTHO05D009921 1.8e-48 196.4 151 65.6
PGR044G2215 Punica granatum HOM05D007826 ORTHO05D009921 6.8e-48 194.5 155 61.9
ATR0307G128 Amborella trichopoda HOM05D007826 ORTHO05D009921 8.9e-48 194.1 151 63.6
Lj3g0023662 Lotus japonicus HOM05D007826 ORTHO05D009921 1.2e-47 193.7 151 62.3
PSO339G1114 Papaver somniferum HOM05D007826 ORTHO05D009921 1.5e-47 193.4 151 60.9
VMungo1080G0241 Vigna mungo HOM05D007826 ORTHO05D009921 2.0e-47 193.0 151 60.9
TPR.G9966 Trifolium pratense HOM05D007826 ORTHO05D009921 3.4e-47 192.2 151 62.3
PSO384G0702 Papaver somniferum HOM05D007826 ORTHO05D009921 4.4e-47 191.8 151 60.3
Lalb_Chr15g0079201 Lupinus albus HOM05D007826 ORTHO05D009921 7.6e-47 191.0 151 62.3
Phvul.005G015800 Phaseolus vulgaris HOM05D007826 ORTHO05D009921 2.9e-46 189.1 151 60.3
Ah.12g064790 Amaranthus hybridus HOM05D007826 ORTHO05D009921 1.1e-45 187.2 151 60.3
Ca_14209_v3 Cicer arietinum L. HOM05D007826 ORTHO05D009921 1.4e-45 186.8 151 62.9
EL10Ac2g02721 Beta vulgaris HOM05D007826 ORTHO05D009921 1.9e-45 186.4 183 50.8
Eucgr.J00084 Eucalyptus grandis HOM05D007826 ORTHO05D009921 1.9e-45 186.4 151 61.6
MSTRG.5081 Avicennia marina HOM05D007826 ORTHO05D009921 3.2e-45 185.7 151 59.6
Glyma.06G310800 Glycine max HOM05D007826 ORTHO05D009921 5.4e-45 184.9 151 60.9
SGA_v2.0_scaffold232G43475 Striga asiatica HOM05D007826 ORTHO05D009921 9.3e-45 184.1 151 58.9
Psat5g224040 Pisum sativum HOM05D007826 ORTHO05D009921 1.6e-44 183.3 151 58.9
Sed0024773 Sechium edule HOM05D007826 ORTHO05D009921 2.1e-44 183.0 151 60.9
ClCG11G013060 Citrullus lanatus HOM05D007826 ORTHO05D009921 6.6e-43 177.9 181 52.5
Migut.N01862 Erythranthe guttata HOM05D007826 ORTHO05D009921 1.1e-42 177.2 151 58.3
Lj9A648T53 Lonicera japonica HOM05D007826 ORTHO05D009921 7.1e-37 157.9 106 66.0
Oeu014623.2 Olea europaea HOM05D007826 ORTHO05D009921 2.3e-35 152.9 202 41.6
Os07g0644600 Oryza sativa ssp. japonica HOM05D007826 ORTHO05D009921 1.1e-34 150.6 151 51.0
Rhsim07G0073100 Rhododendron simsii HOM05D007826 ORTHO05D009921 1.5e-34 150.2 105 63.8
THA.LOC104826745 Tarenaya hassleriana HOM05D007826 ORTHO05D009921 1.9e-34 149.8 151 49.0
Zm00001eb110390 Zea mays HOM05D007826 ORTHO05D009921 1.4e-32 143.7 151 50.3
Mapoly0060s0066 Marchantia polymorpha HOM05D007826 ORTHO05D009921 1.1e-21 107.5 149 36.9
vmacro13798 Vaccinium macrocarpon HOM05D007826 ORTHO05D009921 9.3e-21 104.4 65 72.3
SEGI_16750 Sequoiadendron giganteum HOM05D007826 ORTHO05D009921 2.7e-20 102.8 133 40.6
AagrBONN_evm.TU.Sc2ySwM_228.4931 Anthoceros agrestis HOM05D007826 ORTHO05D009921 8.7e-19 97.8 150 35.3
Rhsim07G0072900 Rhododendron simsii HOM05D007826 ORTHO05D009921 1.9e-10 70.1 45 73.3
FvH4_7g04131 Fragaria vesca HOM05D007826 ORTHO05D009921 2.5e-10 69.7 48 75.0
SEGI_02838 Sequoiadendron giganteum HOM05D007826 ORTHO05D009921 3.1e-08 62.8 43 65.1
Pp3c6_1160 Physcomitrium patens HOM05D007826 ORTHO05D009921 4.1e-08 62.4 127 30.7


User provided reference genes

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