Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 3.3e-286 987.6 484 100.0
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 1.0e-263 912.9 484 92.1
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 9.6e-262 906.4 484 91.5
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.1e-260 902.9 484 90.1
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 2.9e-258 894.8 484 89.7
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 9.3e-257 889.8 484 88.6
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 1.3e-245 852.8 482 85.3
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 6.3e-245 850.5 482 85.9
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 1.8e-244 849.0 482 85.3
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 2.0e-243 845.5 482 84.4
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 5.9e-243 844.0 482 85.3
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 5.5e-241 837.4 482 84.0
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 1.2e-240 836.3 482 83.2
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 1.6e-240 835.9 483 84.1
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 4.7e-240 834.3 483 83.6
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 7.9e-240 833.6 484 83.3
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 1.8e-239 832.4 482 84.9
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 2.3e-239 832.0 483 83.6
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 5.2e-239 830.9 482 83.4
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 2.6e-238 828.6 482 83.2
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 3.3e-238 828.2 482 82.6
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 1.7e-237 825.9 482 83.4
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 1.4e-236 822.8 482 81.3
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 1.8e-236 822.4 483 82.2
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 2.4e-236 822.0 483 82.8
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 7.0e-236 820.5 482 82.8
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 7.0e-236 820.5 513 78.8
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.6e-235 819.3 482 82.4
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 3.5e-235 818.1 482 82.4
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 2.2e-234 815.5 482 82.0
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 3.8e-234 814.7 480 82.3
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 5.0e-234 814.3 482 82.0
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 1.9e-233 812.4 480 82.3
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 5.5e-233 810.8 483 81.2
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 5.5e-233 810.8 482 82.4
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 1.6e-232 809.3 482 81.7
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 1.6e-232 809.3 482 82.0
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 6.1e-232 807.4 482 81.7
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 8.0e-232 807.0 482 81.5
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 2.3e-231 805.4 482 81.5
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 6.7e-231 803.9 482 81.3
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.2e-230 803.1 482 81.5
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 1.5e-230 802.7 482 81.1
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 3.3e-230 801.6 483 80.5
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 7.5e-230 800.4 482 81.3
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 9.7e-230 800.0 482 81.3
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 1.3e-229 799.7 488 79.7
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 1.3e-229 799.7 482 81.5
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.7e-229 799.3 482 81.3
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.7e-229 799.3 482 81.3
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 2.2e-229 798.9 490 81.2
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 3.7e-229 798.1 482 80.7
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 4.8e-229 797.7 488 79.5
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 6.3e-229 797.3 482 80.3
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 7.0e-228 793.9 482 80.1
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 7.0e-228 793.9 482 80.3
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 1.2e-227 793.1 482 80.1
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 1.6e-227 792.7 482 79.7
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 3.8e-226 788.1 482 80.5
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 1.5e-225 786.2 483 79.9
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 7.2e-225 783.9 483 78.5
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 9.4e-225 783.5 481 80.2
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 1.2e-224 783.1 482 80.3
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 1.8e-223 779.2 484 79.3
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 3.0e-223 778.5 483 79.7
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 5.2e-223 777.7 483 79.3
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 7.5e-222 773.9 483 78.9
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 9.8e-222 773.5 484 77.7
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 1.7e-221 772.7 488 78.9
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 2.8e-221 771.9 484 79.1
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 3.7e-221 771.5 485 79.2
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 3.1e-220 768.5 483 78.3
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 4.1e-220 768.1 483 79.1
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 5.4e-220 767.7 483 77.4
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 7.0e-220 767.3 481 77.1
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 1.6e-219 766.1 484 78.7
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 2.7e-219 765.4 481 77.1
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 3.5e-219 765.0 481 76.9
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 3.5e-219 765.0 483 77.4
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 4.5e-219 764.6 488 77.9
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 3.8e-218 761.5 482 78.0
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 5.0e-218 761.1 482 77.6
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 9.5e-217 756.9 420 86.2
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 4.7e-216 754.6 487 77.6
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 4.7e-216 754.6 487 77.6
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 6.8e-215 750.7 482 75.3
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 8.8e-215 750.4 425 85.2
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 2.0e-214 749.2 490 77.6
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 5.7e-214 747.7 485 76.5
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 1.1e-212 743.4 480 75.8
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 1.4e-212 743.0 488 75.4
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 2.7e-211 738.8 488 76.8
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 1.3e-210 736.5 488 76.2
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 2.3e-210 735.7 488 76.6
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 2.9e-210 735.3 484 75.8
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 6.6e-210 734.2 393 88.5
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 2.5e-209 732.3 395 87.8
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 1.6e-208 729.6 485 75.7
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 5.0e-202 708.0 482 73.7
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 4.0e-199 698.4 454 76.0
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 6.6e-194 681.0 425 75.3
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 1.5e-193 679.9 447 73.4
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 2.1e-192 676.0 488 71.7
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 8.9e-191 670.6 389 80.2
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 7.5e-190 667.5 420 76.2
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 4.9e-189 664.8 398 79.1
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 7.1e-188 661.0 383 82.5
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 1.3e-178 630.2 402 74.4
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.3e-170 603.6 431 70.3
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 1.2e-166 590.5 479 64.1
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 5.8e-166 588.2 388 68.6
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 4.6e-163 578.6 402 65.4
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 1.7e-157 560.1 288 91.7
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 2.4e-156 556.2 288 91.7
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 3.3e-137 492.7 363 66.7
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 2.4e-135 486.5 341 70.7
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.1e-100 371.3 237 75.5
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 4.0e-98 362.8 246 72.8
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 5.2e-82 309.3 171 83.6
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 2.3e-61 240.7 130 86.9
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.6e-59 234.6 196 59.7
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 3.6e-59 233.4 134 83.6
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 3.4e-57 226.9 136 78.7
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 1.2e-49 201.8 157 65.6
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 5.4e-47 193.0 140 70.7
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 8.7e-37 159.1 95 82.1
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 6.1e-30 136.3 105 63.8
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 1.4e-13 82.0 59 66.1
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 1.8e-10 71.6 283 25.4
Mapoly0068s0034 Marchantia polymorpha HOM05D000776 ORTHO05D001624 2.5e-07 61.2 128 32.0
Mapoly0065s0029 Marchantia polymorpha HOM05D000776 ORTHO05D001624 3.6e-06 57.4 138 30.4
Ciclev10020907m.g Citrus clementina HOM05D000776 ORTHO05D001624 4.7e-06 57.0 151 27.2
TPR.G12967 Trifolium pratense HOM05D000776 ORTHO05D001624 4.7e-06 57.0 164 25.6
BraA01t02620Z Brassica rapa HOM05D000776 ORTHO05D001624 8.0e-06 56.2 158 23.4
PSO782G1764 Papaver somniferum HOM05D000776 ORTHO05D001624 8.0e-06 56.2 172 26.2


User provided reference genes

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